RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W RPL42BP0CX28 106 aaKnown RBP4.51□□□□□ -1.69
PTC1YDL006W YFL068WP0CX99 160 aa4.51□□□□□ -1.69
PTC1YDL006W YLL066W-AP0CY00 160 aa4.51□□□□□ -1.69
PTC1YDL006W YLL067W-AP0CY01 160 aa4.51□□□□□ -1.69
PTC1YDL006W MAS2P11914 482 aa4.51□□□□□ -1.69
PTC1YDL006W SNA3P14359 133 aa4.51□□□□□ -1.69
PTC1YDL006W RME1P32338 300 aaKnown RBP4.51□□□□□ -1.69
PTC1YDL006W SPC110P32380 944 aa4.51□□□□□ -1.69
PTC1YDL006W YSC83P32792 385 aa4.51□□□□□ -1.69
PTC1YDL006W MFT1P33441 392 aaKnown RBP4.51□□□□□ -1.69
PTC1YDL006W YKL023WP36103 277 aaKnown RBP4.51□□□□□ -1.69
PTC1YDL006W EFM2P38347 419 aa4.51□□□□□ -1.69
PTC1YDL006W SGN1P40561 250 aaKnown RBP RIP-Chip data4.51□□□□□ -1.69not detected
PTC1YDL006W MAF1P41910 395 aa4.51□□□□□ -1.69
PTC1YDL006W GAT1P43574 510 aa4.51□□□□□ -1.69
PTC1YDL006W ALK1P43633 760 aaKnown RBP4.51□□□□□ -1.69
PTC1YDL006W AIP1P46680 615 aaKnown RBP4.51□□□□□ -1.69
PTC1YDL006W COS5P47187 383 aa4.51□□□□□ -1.69
PTC1YDL006W IPI3P53877 555 aa4.51□□□□□ -1.69
PTC1YDL006W ARK1P53974 638 aa4.51□□□□□ -1.69
PTC1YDL006W YVH1Q02256 364 aaKnown RBP4.51□□□□□ -1.69
PTC1YDL006W NUP100Q02629 959 aa4.51□□□□□ -1.69
PTC1YDL006W YMR254CQ04838 102 aa4.51□□□□□ -1.69
PTC1YDL006W YLR287CQ05881 355 aa4.51□□□□□ -1.69
PTC1YDL006W YDL057WQ07379 328 aa4.51□□□□□ -1.69
PTC1YDL006W SFI1Q12369 946 aa4.51□□□□□ -1.69
PTC1YDL006W HIF1Q12373 385 aa4.51□□□□□ -1.69
PTC1YDL006W SEC39Q12745 709 aa4.51□□□□□ -1.69
PTC1YDL006W PDR3P33200 976 aa4.5□□□□□ -1.69
PTC1YDL006W SEC66P33754 206 aa4.5□□□□□ -1.69
PTC1YDL006W RPC25P35718 212 aa4.5□□□□□ -1.69
PTC1YDL006W ROT2P38138 954 aa4.5□□□□□ -1.69
PTC1YDL006W VID24P38263 362 aa4.5□□□□□ -1.69
PTC1YDL006W PET130P47065 347 aa4.5□□□□□ -1.69
PTC1YDL006W SCS3P53012 380 aa4.5□□□□□ -1.69
PTC1YDL006W TWF1P53250 332 aa4.5□□□□□ -1.69
PTC1YDL006W RTT102P53330 157 aa4.5□□□□□ -1.69
PTC1YDL006W COQ9Q05779 260 aa4.5□□□□□ -1.69
PTC1YDL006W SSK1Q07084 712 aa4.5□□□□□ -1.69
PTC1YDL006W PLP2Q12017 286 aa4.5□□□□□ -1.69
PTC1YDL006W ATG29Q12092 213 aa4.5□□□□□ -1.69
PTC1YDL006W FKS1P38631 1876 aaKnown RBP4.49□□□□□ -1.69
PTC1YDL006W RED1P14291 827 aa4.49□□□□□ -1.69
PTC1YDL006W PHO13P19881 312 aa4.49□□□□□ -1.69
PTC1YDL006W PAP1P29468 568 aaKnown RBP4.49□□□□□ -1.69
PTC1YDL006W TMT1P32643 299 aa4.49□□□□□ -1.69
PTC1YDL006W NFU1P32860 256 aa4.49□□□□□ -1.69
PTC1YDL006W NIP100P33420 868 aa4.49□□□□□ -1.69
PTC1YDL006W PHD1P36093 366 aa4.49□□□□□ -1.69
PTC1YDL006W SPC34P36131 295 aa4.49□□□□□ -1.69
PTC1YDL006W MSR1P38714 643 aa4.49□□□□□ -1.69
PTC1YDL006W YHR210CP38893 341 aa4.49□□□□□ -1.69
PTC1YDL006W SCD6P45978 349 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
PTC1YDL006W SNG1P46950 547 aa4.49□□□□□ -1.69
PTC1YDL006W CUL3P53202 744 aa4.49□□□□□ -1.69
PTC1YDL006W CAF130P53280 1122 aaPredicted RBP4.49□□□□□ -1.69
PTC1YDL006W SMM1P53720 384 aaKnown RBP4.49□□□□□ -1.69
PTC1YDL006W YNL146WP53906 100 aa4.49□□□□□ -1.69
PTC1YDL006W MPS1P54199 764 aa4.49□□□□□ -1.69
PTC1YDL006W RHO4Q00246 291 aa4.49□□□□□ -1.69
PTC1YDL006W TOF2Q02208 771 aa4.49□□□□□ -1.69
PTC1YDL006W RQC1Q05468 723 aaKnown RBP4.49□□□□□ -1.69
PTC1YDL006W RLP24Q07915 199 aaKnown RBP4.49□□□□□ -1.69
PTC1YDL006W IES4Q08561 116 aa4.49□□□□□ -1.69
PTC1YDL006W NCE102Q12207 173 aaRIP-Chip data4.49□□□□□ -1.69not detected
PTC1YDL006W ICT1Q12385 394 aa4.49□□□□□ -1.69
PTC1YDL006W PEP5P12868 1029 aa4.48□□□□□ -1.69
PTC1YDL006W TYR1P20049 452 aa4.48□□□□□ -1.69
PTC1YDL006W DPH2P32461 534 aa4.48□□□□□ -1.69
PTC1YDL006W MUD1P32605 298 aaKnown RBP4.48□□□□□ -1.69
PTC1YDL006W YME1P32795 747 aa4.48□□□□□ -1.69
PTC1YDL006W CMC1P36064 111 aa4.48□□□□□ -1.69
PTC1YDL006W ARC40P38328 384 aaKnown RBP4.48□□□□□ -1.69
PTC1YDL006W RTT107P38850 1070 aa4.48□□□□□ -1.69
PTC1YDL006W SMC2P38989 1170 aaKnown RBP4.48□□□□□ -1.69
PTC1YDL006W FET5P43561 622 aa4.48□□□□□ -1.69
PTC1YDL006W YJR154WP47181 346 aa4.48□□□□□ -1.69
PTC1YDL006W ALT2P52892 507 aa4.48□□□□□ -1.69
PTC1YDL006W SHE10P53075 577 aa4.48□□□□□ -1.69
PTC1YDL006W DUG3P53871 357 aa4.48□□□□□ -1.69
PTC1YDL006W TIM8P57744 87 aa4.48□□□□□ -1.69
PTC1YDL006W DON1Q05610 365 aa4.48□□□□□ -1.69
PTC1YDL006W YLR352WQ06479 807 aa4.48□□□□□ -1.69
PTC1YDL006W YPR078CQ06813 372 aa4.48□□□□□ -1.69
PTC1YDL006W YOR365CQ08844 703 aa4.48□□□□□ -1.69
PTC1YDL006W APL5Q08951 932 aaKnown RBP4.48□□□□□ -1.69
PTC1YDL006W RTN2Q12443 393 aa4.48□□□□□ -1.69
PTC1YDL006W HSH49Q99181 213 aaPredicted RBP4.48□□□□□ -1.69
PTC1YDL006W MET17P06106 444 aa4.47□□□□□ -1.69
PTC1YDL006W PEP4P07267 405 aaKnown RBP4.47□□□□□ -1.69
PTC1YDL006W PRP2P20095 876 aaPredicted RBP4.47□□□□□ -1.69
PTC1YDL006W MGR1P25573 417 aa4.47□□□□□ -1.69
PTC1YDL006W ERG3P32353 365 aa4.47□□□□□ -1.69
PTC1YDL006W SKG6P32900 734 aaPredicted RBP4.47□□□□□ -1.69
PTC1YDL006W SMF1P38925 575 aa4.47□□□□□ -1.69
PTC1YDL006W ALD5P40047 520 aaKnown RBP4.47□□□□□ -1.69
PTC1YDL006W LCB2P40970 561 aa4.47□□□□□ -1.69
PTC1YDL006W STB2P46679 850 aa4.47□□□□□ -1.69
PTC1YDL006W HSH155P49955 971 aaKnown RBP4.47□□□□□ -1.69
PTC1YDL006W SHR3Q02774 210 aa4.47□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 121.5 ms