RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPB1	YCL054W	RIP1	P08067	215 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	SNF3	P10870	884 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	RAP1	P11938	827 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	MIA40	P36046	403 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	TCM62	P38228	572 aa	Known RBP	2.61	□□□□□ -1.99
SPB1	YCL054W	ICS2	P38284	255 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	OSW5	P40219	148 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	CHS6	P40955	746 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	RPN14	P53196	417 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	PDR16	P53860	351 aa	Known RBP	2.61	□□□□□ -1.99
SPB1	YCL054W	PIG1	Q06216	648 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	ATG26	Q06321	1198 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	YOR365C	Q08844	703 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	RKM1	Q08961	583 aa	Predicted RBP	2.61	□□□□□ -1.99
SPB1	YCL054W	UBX3	Q12229	455 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	GSC2	P40989	1895 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	PDR18	P53756	1333 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	ARG81	P05085	880 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	YML002W	P0CF17	737 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	URA4	P20051	364 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	CLN1	P20437	546 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	GAC1	P28006	793 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	SAC1	P32368	623 aa	Known RBP	2.61	□□□□□ -1.99
SPB1	YCL054W	HIR2	P32480	875 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	ZTA1	P38230	334 aa	Known RBP	2.61	□□□□□ -1.99
SPB1	YCL054W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	2.61	□□□□□ -1.99	RIP-Chip
SPB1	YCL054W	CIN4	P39110	191 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	VHS2	P40463	436 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	AGX1	P43567	385 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	PTR3	P43606	678 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	AIP1	P46680	615 aa	Known RBP	2.61	□□□□□ -1.99
SPB1	YCL054W	YGL242C	P53066	181 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	YGL138C	P53122	345 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	PFA5	Q03289	374 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	EMI2	Q04409	500 aa	Known RBP	2.61	□□□□□ -1.99
SPB1	YCL054W	YPR172W	Q06608	200 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	ACF2	Q12168	779 aa		2.61	□□□□□ -1.99
SPB1	YCL054W	FLO1	P32768	1537 aa		2.6	□□□□□ -1.99
SPB1	YCL054W	RAD52	P06778	471 aa	Known RBP	2.6	□□□□□ -1.99
SPB1	YCL054W	PHO84	P25297	587 aa	Known RBP	2.6	□□□□□ -1.99
SPB1	YCL054W	RPS2	P25443	254 aa	Known RBP	2.6	□□□□□ -1.99
SPB1	YCL054W	FAA1	P30624	700 aa	Known RBP	2.6	□□□□□ -1.99
SPB1	YCL054W	NIP1	P32497	812 aa	Known RBP	2.6	□□□□□ -1.99
SPB1	YCL054W	SUR1	P33300	382 aa		2.6	□□□□□ -1.99
SPB1	YCL054W	PCA1	P38360	1216 aa		2.6	□□□□□ -1.99
SPB1	YCL054W	LEU5	P38702	357 aa		2.6	□□□□□ -1.99
SPB1	YCL054W	YHR210C	P38893	341 aa		2.6	□□□□□ -1.99
SPB1	YCL054W	FAD1	P38913	306 aa		2.6	□□□□□ -1.99
SPB1	YCL054W	TIF4631	P39935	952 aa	Known RBP	2.6	□□□□□ -1.99
SPB1	YCL054W	YIL060W	P40519	144 aa		2.6	□□□□□ -1.99
SPB1	YCL054W	LAM5	P43560	674 aa		2.6	□□□□□ -1.99
SPB1	YCL054W	OCA2	P53949	197 aa		2.6	□□□□□ -1.99
SPB1	YCL054W	RRP45	Q05636	305 aa	Known RBP	2.6	□□□□□ -1.99
SPB1	YCL054W	ARV1	Q06541	321 aa		2.6	□□□□□ -1.99
SPB1	YCL054W	YDL057W	Q07379	328 aa		2.6	□□□□□ -1.99
SPB1	YCL054W	SLK19	Q08581	821 aa	Known RBP	2.6	□□□□□ -1.99
SPB1	YCL054W	VAM3	Q12241	283 aa		2.6	□□□□□ -1.99
SPB1	YCL054W	YLR111W	Q12528	110 aa		2.6	□□□□□ -1.99
SPB1	YCL054W	MRP2	P10663	115 aa	Predicted RBP	2.6	□□□□□ -1.99
SPB1	YCL054W	OM45	P16547	393 aa		2.6	□□□□□ -1.99
SPB1	YCL054W	YCR006C	P25350	157 aa		2.6	□□□□□ -1.99
SPB1	YCL054W	SIN4	P32259	974 aa		2.6	□□□□□ -1.99
SPB1	YCL054W	YBL028C	P38202	106 aa		2.6	□□□□□ -1.99
SPB1	YCL054W	DBP8	P38719	431 aa		2.6	□□□□□ -1.99
SPB1	YCL054W	CCT2	P39076	527 aa	Known RBP	2.6	□□□□□ -1.99
SPB1	YCL054W	PIB2	P53191	635 aa		2.6	□□□□□ -1.99
SPB1	YCL054W	BUD32	P53323	261 aa		2.6	□□□□□ -1.99
SPB1	YCL054W	ECM30	Q06673	1274 aa		2.6	□□□□□ -1.99
SPB1	YCL054W	NOP6	Q07623	225 aa	Known RBP	2.6	□□□□□ -1.99
SPB1	YCL054W	APL4	Q12028	832 aa		2.6	□□□□□ -1.99
SPB1	YCL054W	SUC2	P00724	532 aa		2.59	□□□□□ -1.99
SPB1	YCL054W	HNM1	P19807	563 aa		2.59	□□□□□ -1.99
SPB1	YCL054W	RAD14	P28519	371 aa		2.59	□□□□□ -1.99
SPB1	YCL054W	MSN2	P33748	704 aa		2.59	□□□□□ -1.99
SPB1	YCL054W	OCT1	P35999	772 aa		2.59	□□□□□ -1.99
SPB1	YCL054W	SYG1	P40528	902 aa		2.59	□□□□□ -1.99
SPB1	YCL054W	URB2	P47108	1174 aa		2.59	□□□□□ -1.99
SPB1	YCL054W	YNL143C	P53908	130 aa		2.59	□□□□□ -1.99
SPB1	YCL054W	UTP6	Q02354	440 aa	Known RBP	2.59	□□□□□ -1.99
SPB1	YCL054W	PPM1	Q04081	328 aa		2.59	□□□□□ -1.99
SPB1	YCL054W	NDL1	Q06568	189 aa		2.59	□□□□□ -1.99
SPB1	YCL054W	HBT1	Q07653	1046 aa	Known RBP	2.59	□□□□□ -1.99
SPB1	YCL054W	ULA1	Q12059	462 aa		2.59	□□□□□ -1.99
SPB1	YCL054W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	2.59	□□□□□ -1.99	not detected
SPB1	YCL054W	ATP10	P18496	279 aa		2.59	□□□□□ -2
SPB1	YCL054W	ATP11	P32453	318 aa		2.59	□□□□□ -2
SPB1	YCL054W	PRP21	P32524	280 aa	Predicted RBP	2.59	□□□□□ -2
SPB1	YCL054W	COY1	P34237	679 aa		2.59	□□□□□ -2
SPB1	YCL054W	MRPL4	P36517	319 aa		2.59	□□□□□ -2
SPB1	YCL054W	RIX1	P38883	763 aa	Predicted RBP	2.59	□□□□□ -2
SPB1	YCL054W	YGR266W	P53326	701 aa		2.59	□□□□□ -2
SPB1	YCL054W	VTC3	Q02725	835 aa		2.59	□□□□□ -2
SPB1	YCL054W	MGR3	Q04472	501 aa		2.59	□□□□□ -2
SPB1	YCL054W	POS5	Q06892	414 aa		2.59	□□□□□ -2
SPB1	YCL054W	AEP3	Q12089	606 aa		2.59	□□□□□ -2
SPB1	YCL054W	RDL1	Q12305	139 aa	Known RBP	2.59	□□□□□ -2
SPB1	YCL054W	UBA1	P22515	1024 aa	Known RBP	2.58	□□□□□ -2
SPB1	YCL054W	MRPL25	P23369	157 aa		2.58	□□□□□ -2
SPB1	YCL054W	SAT4	P25333	603 aa	Known RBP	2.58	□□□□□ -2
SPB1	YCL054W	PPZ1	P26570	692 aa		2.58	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms