RNA–Protein interactions for RNA: YCL050C

APA1, Transcript of AP4A phosphorylase, yeast

Gene APA1, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APA1	YCL050C	ESL1	P40456	1118 aa		3.6	□□□□□ -1.83
APA1	YCL050C	NCA3	P46955	337 aa		3.6	□□□□□ -1.83
APA1	YCL050C	ECM27	P47144	725 aa		3.6	□□□□□ -1.83
APA1	YCL050C	TOF1	P53840	1238 aa		3.6	□□□□□ -1.83
APA1	YCL050C	VTA1	Q06263	330 aa		3.6	□□□□□ -1.83
APA1	YCL050C	PKH2	Q12236	1081 aa	Known RBP	3.6	□□□□□ -1.83
APA1	YCL050C	RRD2	Q12461	358 aa		3.6	□□□□□ -1.83
APA1	YCL050C	SUP35	P05453	685 aa	Known RBP	3.59	□□□□□ -1.83
APA1	YCL050C	GPH1	P06738	902 aa	Known RBP	3.59	□□□□□ -1.83
APA1	YCL050C	YIM1	P28625	365 aa		3.59	□□□□□ -1.83
APA1	YCL050C	PRP21	P32524	280 aa	Predicted RBP	3.59	□□□□□ -1.83
APA1	YCL050C	ECM25	P32525	599 aa		3.59	□□□□□ -1.83
APA1	YCL050C	STB6	P36085	766 aa		3.59	□□□□□ -1.83
APA1	YCL050C	MIX23	P38162	196 aa		3.59	□□□□□ -1.83
APA1	YCL050C	YIF1	P53845	314 aa	Known RBP	3.59	□□□□□ -1.83
APA1	YCL050C	ADD37	Q03233	198 aa		3.59	□□□□□ -1.83
APA1	YCL050C	TIM18	Q08749	192 aa		3.59	□□□□□ -1.83
APA1	YCL050C	HIS4	P00815	799 aa	Known RBP	3.58	□□□□□ -1.84
APA1	YCL050C	INH1	P01097	85 aa		3.58	□□□□□ -1.84
APA1	YCL050C	RED1	P14291	827 aa		3.58	□□□□□ -1.84
APA1	YCL050C	HXT3	P32466	567 aa	Known RBP	3.58	□□□□□ -1.84
APA1	YCL050C	HCS1	P34243	683 aa		3.58	□□□□□ -1.84
APA1	YCL050C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	RIP-Chip
APA1	YCL050C	CCT2	P39076	527 aa	Known RBP	3.58	□□□□□ -1.84
APA1	YCL050C	MST28	P39552	234 aa		3.58	□□□□□ -1.84
APA1	YCL050C	VMA13	P41807	478 aa	Known RBP	3.58	□□□□□ -1.84
APA1	YCL050C	KTR5	P53966	522 aa	Predicted RBP	3.58	□□□□□ -1.84
APA1	YCL050C	COG4	Q06096	861 aa		3.58	□□□□□ -1.84
APA1	YCL050C	YPR022C	Q12139	1133 aa		3.58	□□□□□ -1.84
APA1	YCL050C	RTN2	Q12443	393 aa		3.58	□□□□□ -1.84
APA1	YCL050C	CLB3	P24870	427 aa		3.57	□□□□□ -1.84
APA1	YCL050C	TIP1	P27654	210 aa	Predicted RBP	3.57	□□□□□ -1.84
APA1	YCL050C	ARA1	P38115	344 aa		3.57	□□□□□ -1.84
APA1	YCL050C	YHR054C	P38780	354 aa		3.57	□□□□□ -1.84
APA1	YCL050C	SDT1	P53078	280 aa		3.57	□□□□□ -1.84
APA1	YCL050C	SIL1	Q08199	421 aa		3.57	□□□□□ -1.84
APA1	YCL050C	TMS1	Q12116	473 aa		3.57	□□□□□ -1.84
APA1	YCL050C	RTP1	Q12751	981 aa		3.57	□□□□□ -1.84
APA1	YCL050C	RAD61	Q99359	647 aa		3.57	□□□□□ -1.84
APA1	YCL050C	SRV2	P17555	526 aa	Known RBP	3.56	□□□□□ -1.84
APA1	YCL050C	MTC6	P38849	526 aa		3.56	□□□□□ -1.84
APA1	YCL050C	PRE5	P40302	234 aa	Known RBP	3.56	□□□□□ -1.84
APA1	YCL050C	PRM5	P40476	318 aa		3.56	□□□□□ -1.84
APA1	YCL050C	DLD2	P46681	530 aa	Known RBP	3.56	□□□□□ -1.84
APA1	YCL050C	FMS1	P50264	508 aa		3.56	□□□□□ -1.84
APA1	YCL050C	FRE4	P53746	719 aa		3.56	□□□□□ -1.84
APA1	YCL050C	MDG1	P53885	366 aa		3.56	□□□□□ -1.84
APA1	YCL050C	REX4	Q08237	289 aa		3.56	□□□□□ -1.84
APA1	YCL050C	RRG7	Q08774	242 aa	Predicted RBP	3.56	□□□□□ -1.84
APA1	YCL050C	ARG4	P04076	463 aa	Predicted RBP	3.55	□□□□□ -1.84
APA1	YCL050C	RIP1	P08067	215 aa		3.55	□□□□□ -1.84
APA1	YCL050C	PET123	P17558	318 aa		3.55	□□□□□ -1.84
APA1	YCL050C	CLC1	P17891	233 aa		3.55	□□□□□ -1.84
APA1	YCL050C	SAS3	P34218	831 aa		3.55	□□□□□ -1.84
APA1	YCL050C	LYS1	P38998	373 aa	RIP-Chip data	3.55	□□□□□ -1.84	not detected
APA1	YCL050C	REE1	P40893	198 aa		3.55	□□□□□ -1.84
APA1	YCL050C	TAF11	Q04226	346 aa		3.55	□□□□□ -1.84
APA1	YCL050C	TEF1	P02994	458 aa	Known RBP	3.54	□□□□□ -1.84
APA1	YCL050C	CLN3	P13365	580 aa		3.54	□□□□□ -1.84
APA1	YCL050C	SLY1	P22213	666 aa		3.54	□□□□□ -1.84
APA1	YCL050C	DAL2	P25335	343 aa		3.54	□□□□□ -1.84
APA1	YCL050C	PIM1	P36775	1133 aa		3.54	□□□□□ -1.84
APA1	YCL050C	FAA2	P39518	744 aa		3.54	□□□□□ -1.84
APA1	YCL050C	SAS2	P40963	338 aa		3.54	□□□□□ -1.84
APA1	YCL050C	RPA49	Q01080	415 aa	Predicted RBP	3.54	□□□□□ -1.84
APA1	YCL050C	YMR181C	Q03231	154 aa		3.54	□□□□□ -1.84
APA1	YCL050C	HER2	Q03557	464 aa		3.54	□□□□□ -1.84
APA1	YCL050C	PPM1	Q04081	328 aa		3.54	□□□□□ -1.84
APA1	YCL050C	RRP45	Q05636	305 aa	Known RBP	3.54	□□□□□ -1.84
APA1	YCL050C	HRI1	Q05905	244 aa	Known RBP	3.54	□□□□□ -1.84
APA1	YCL050C	MRPL35	Q06678	367 aa		3.54	□□□□□ -1.84
APA1	YCL050C	HSP42	Q12329	375 aa		3.54	□□□□□ -1.84
APA1	YCL050C	SWE1	P32944	819 aa		3.53	□□□□□ -1.84
APA1	YCL050C	NTC20	P38302	140 aa	Predicted RBP	3.53	□□□□□ -1.84
APA1	YCL050C	RPS0B	P46654	252 aa	Known RBP	3.53	□□□□□ -1.84
APA1	YCL050C	HMS2	P47175	358 aa		3.53	□□□□□ -1.84
APA1	YCL050C	YNR048W	P53740	393 aa		3.53	□□□□□ -1.84
APA1	YCL050C	MDM1	Q01846	1127 aa		3.53	□□□□□ -1.84
APA1	YCL050C	SYF1	Q04048	859 aa	Predicted RBP	3.53	□□□□□ -1.84
APA1	YCL050C	YLR287C	Q05881	355 aa		3.53	□□□□□ -1.84
APA1	YCL050C	TMC1	Q08422	150 aa	Predicted RBP	3.53	□□□□□ -1.84
APA1	YCL050C	SGT1	Q08446	395 aa		3.53	□□□□□ -1.84
APA1	YCL050C	SNX3	Q08826	162 aa	Known RBP	3.53	□□□□□ -1.84
APA1	YCL050C	HRT3	Q12347	344 aa		3.53	□□□□□ -1.84
APA1	YCL050C	YOL159C-A	Q3E769	90 aa		3.53	□□□□□ -1.84
APA1	YCL050C	CDC31	P06704	161 aa	Known RBP	3.52	□□□□□ -1.85
APA1	YCL050C	ERG3	P32353	365 aa		3.52	□□□□□ -1.85
APA1	YCL050C	MNS1	P32906	549 aa		3.52	□□□□□ -1.85
APA1	YCL050C	SWD3	P38123	315 aa		3.52	□□□□□ -1.85
APA1	YCL050C	YJR011C	P47086	261 aa	Predicted RBP	3.52	□□□□□ -1.85
APA1	YCL050C	HXT11	P54862	567 aa		3.52	□□□□□ -1.85
APA1	YCL050C	SFI1	Q12369	946 aa		3.52	□□□□□ -1.85
APA1	YCL050C	SPO7	P18410	259 aa		3.51	□□□□□ -1.85
APA1	YCL050C	REC107	P21651	314 aa		3.51	□□□□□ -1.85
APA1	YCL050C	RVS161	P25343	265 aa	Known RBP	3.51	□□□□□ -1.85
APA1	YCL050C	ITR1	P30605	584 aa		3.51	□□□□□ -1.85
APA1	YCL050C	RML2	P32611	393 aa		3.51	□□□□□ -1.85
APA1	YCL050C	KKQ8	P36004	724 aa		3.51	□□□□□ -1.85
APA1	YCL050C	YGL138C	P53122	345 aa		3.51	□□□□□ -1.85
APA1	YCL050C	PEX25	Q02969	394 aa		3.51	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms