RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W VMA10P48836 114 aaKnown RBP3.32□□□□□ -1.88
NUP60YAR002W DIA3P52290 468 aa3.32□□□□□ -1.88
NUP60YAR002W AIM14P53109 570 aa3.32□□□□□ -1.88
NUP60YAR002W YGL108CP53139 140 aa3.32□□□□□ -1.88
NUP60YAR002W NPY1P53164 384 aa3.32□□□□□ -1.88
NUP60YAR002W SHY1P53266 389 aa3.32□□□□□ -1.88
NUP60YAR002W GPI1P53306 609 aa3.32□□□□□ -1.88
NUP60YAR002W ASI2P53895 289 aa3.32□□□□□ -1.88
NUP60YAR002W YNL018CP53976 612 aa3.32□□□□□ -1.88
NUP60YAR002W ECM9Q02202 377 aa3.32□□□□□ -1.88
NUP60YAR002W TOF2Q02208 771 aa3.32□□□□□ -1.88
NUP60YAR002W YPL014WQ02606 381 aa3.32□□□□□ -1.88
NUP60YAR002W PIR1Q03178 341 aa3.32□□□□□ -1.88
NUP60YAR002W MMT1Q03218 510 aa3.32□□□□□ -1.88
NUP60YAR002W YKU80Q04437 629 aa3.32□□□□□ -1.88
NUP60YAR002W YPR114WQ06107 315 aa3.32□□□□□ -1.88
NUP60YAR002W TMA10Q06177 86 aa3.32□□□□□ -1.88
NUP60YAR002W GMC2Q06201 188 aa3.32□□□□□ -1.88
NUP60YAR002W ATG33Q06485 197 aa3.32□□□□□ -1.88
NUP60YAR002W VAM6Q07468 1049 aa3.32□□□□□ -1.88
NUP60YAR002W UAF30Q08747 228 aa3.32□□□□□ -1.88
NUP60YAR002W SUC2P00724 532 aa3.31□□□□□ -1.88
NUP60YAR002W SPT3P06844 337 aa3.31□□□□□ -1.88
NUP60YAR002W HMG2P12684 1045 aa3.31□□□□□ -1.88
NUP60YAR002W UGA1P17649 471 aa3.31□□□□□ -1.88
NUP60YAR002W ERG6P25087 383 aaKnown RBP3.31□□□□□ -1.88
NUP60YAR002W RVS161P25343 265 aaKnown RBP3.31□□□□□ -1.88
NUP60YAR002W CIN8P27895 1000 aa3.31□□□□□ -1.88
NUP60YAR002W MRPL9P31334 269 aa3.31□□□□□ -1.88
NUP60YAR002W VPH2P32341 215 aa3.31□□□□□ -1.88
NUP60YAR002W UGP1P32861 499 aaKnown RBP3.31□□□□□ -1.88
NUP60YAR002W CAF4P36130 643 aa3.31□□□□□ -1.88
NUP60YAR002W NPT1P39683 429 aaKnown RBP3.31□□□□□ -1.88
NUP60YAR002W GIP4P39732 760 aa3.31□□□□□ -1.88
NUP60YAR002W ECM10P39987 644 aa3.31□□□□□ -1.88
NUP60YAR002W FMP10P40098 244 aa3.31□□□□□ -1.88
NUP60YAR002W MEP1P40260 492 aa3.31□□□□□ -1.88
NUP60YAR002W GCD10P41814 478 aa3.31□□□□□ -1.88
NUP60YAR002W AIM23P47015 356 aa3.31□□□□□ -1.88
NUP60YAR002W TIS11P47977 285 aa3.31□□□□□ -1.88
NUP60YAR002W MTR3P48240 250 aaPredicted RBP3.31□□□□□ -1.88
NUP60YAR002W NAS6P50086 228 aa3.31□□□□□ -1.88
NUP60YAR002W EXG2P52911 562 aa3.31□□□□□ -1.88
NUP60YAR002W YNL033WP53964 284 aa3.31□□□□□ -1.88
NUP60YAR002W YNL019CP53975 284 aa3.31□□□□□ -1.88
NUP60YAR002W SKI8Q02793 397 aaPredicted RBP3.31□□□□□ -1.88
NUP60YAR002W PRP3Q03338 469 aaPredicted RBP3.31□□□□□ -1.88
NUP60YAR002W CLU1Q03690 1277 aaKnown RBP3.31□□□□□ -1.88
NUP60YAR002W TRM12Q04235 462 aa3.31□□□□□ -1.88
NUP60YAR002W SEG1Q04279 960 aa3.31□□□□□ -1.88
NUP60YAR002W YMR111CQ04461 462 aaPredicted RBP3.31□□□□□ -1.88
NUP60YAR002W VTA1Q06263 330 aa3.31□□□□□ -1.88
NUP60YAR002W THI73Q07904 523 aa3.31□□□□□ -1.88
NUP60YAR002W IRC10Q08118 586 aa3.31□□□□□ -1.88
NUP60YAR002W ENB1Q08299 606 aa3.31□□□□□ -1.88
NUP60YAR002W SLF1Q12034 447 aaKnown RBP3.31□□□□□ -1.88
NUP60YAR002W ULA1Q12059 462 aa3.31□□□□□ -1.88
NUP60YAR002W THP2O13539 261 aaKnown RBP3.3□□□□□ -1.88
NUP60YAR002W HIP1P06775 603 aa3.3□□□□□ -1.88
NUP60YAR002W BCY1P07278 416 aaKnown RBP3.3□□□□□ -1.88
NUP60YAR002W SUI3P09064 285 aaKnown RBP3.3□□□□□ -1.88
NUP60YAR002W ATR1P13090 542 aa3.3□□□□□ -1.88
NUP60YAR002W MSS116P15424 664 aaKnown RBP3.3□□□□□ -1.88
NUP60YAR002W MNE1P24720 663 aa3.3□□□□□ -1.88
NUP60YAR002W SGF29P25554 259 aa3.3□□□□□ -1.88
NUP60YAR002W SPB1P25582 841 aaPredicted RBP3.3□□□□□ -1.88
NUP60YAR002W PEX34P25584 144 aa3.3□□□□□ -1.88
NUP60YAR002W PRP18P33411 251 aaPredicted RBP3.3□□□□□ -1.88
NUP60YAR002W TIP20P33891 701 aa3.3□□□□□ -1.88
NUP60YAR002W YKL100CP34248 587 aa3.3□□□□□ -1.88
NUP60YAR002W MRPL17P36528 281 aa3.3□□□□□ -1.88
NUP60YAR002W ROT2P38138 954 aa3.3□□□□□ -1.88
NUP60YAR002W FAA2P39518 744 aa3.3□□□□□ -1.88
NUP60YAR002W VHR1P40522 640 aa3.3□□□□□ -1.88
NUP60YAR002W PTR3P43606 678 aa3.3□□□□□ -1.88
NUP60YAR002W RMD8P43620 662 aa3.3□□□□□ -1.88
NUP60YAR002W YPT32P51996 222 aaKnown RBP3.3□□□□□ -1.88
NUP60YAR002W MNT2P53059 558 aa3.3□□□□□ -1.88
NUP60YAR002W SPC105P53148 917 aa3.3□□□□□ -1.88
NUP60YAR002W DCP2P53550 970 aaKnown RBP3.3□□□□□ -1.88
NUP60YAR002W FRE4P53746 719 aa3.3□□□□□ -1.88
NUP60YAR002W PRM1P53835 661 aa3.3□□□□□ -1.88
NUP60YAR002W VAC7P53950 1165 aa3.3□□□□□ -1.88
NUP60YAR002W SVL3Q03088 825 aaKnown RBP3.3□□□□□ -1.88
NUP60YAR002W MUS81Q04149 632 aaPredicted RBP3.3□□□□□ -1.88
NUP60YAR002W YOL159CQ08300 171 aa3.3□□□□□ -1.88
NUP60YAR002W GET4Q12125 312 aa3.3□□□□□ -1.88
NUP60YAR002W PSY3Q12318 242 aa3.3□□□□□ -1.88
NUP60YAR002W YOR338WQ99326 363 aa3.3□□□□□ -1.88
NUP60YAR002W HXK2P04807 486 aaKnown RBP3.3□□□□□ -1.88
NUP60YAR002W ARG81P05085 880 aa3.3□□□□□ -1.88
NUP60YAR002W ARG3P05150 338 aa3.3□□□□□ -1.88
NUP60YAR002W HMG1P12683 1054 aa3.3□□□□□ -1.88
NUP60YAR002W SNF4P12904 322 aa3.3□□□□□ -1.88
NUP60YAR002W TAL1P15019 335 aaKnown RBP3.3□□□□□ -1.88
NUP60YAR002W OCA4P25366 362 aa3.3□□□□□ -1.88
NUP60YAR002W RPL5P26321 297 aaKnown RBP3.3□□□□□ -1.88
NUP60YAR002W URK1P27515 501 aa3.3□□□□□ -1.88
NUP60YAR002W CRM1P30822 1084 aaKnown RBP3.3□□□□□ -1.88
NUP60YAR002W DCG1P32460 244 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms