RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 SRBD1Q8N5C6 995 aaKnown RBP26.87■■□□□ 1.89
MBD3-211ENST00000592965 CCDC155Q8N6L0 562 aa26.87■■□□□ 1.89
MBD3-211ENST00000592965 RETREG2Q8NC44 543 aa26.87■■□□□ 1.89
MBD3-211ENST00000592965 CAGE1Q8TC20 777 aa26.87■■□□□ 1.89
MBD3-211ENST00000592965 MSRAQ9UJ68 235 aa26.87■■□□□ 1.89
MBD3-211ENST00000592965 SLC4A7Q9Y6M7 1214 aa26.87■■□□□ 1.89
MBD3-211ENST00000592965 HAS3O00219 553 aa26.86■■□□□ 1.89
MBD3-211ENST00000592965 PIK3CDO00329 1044 aa26.86■■□□□ 1.89
MBD3-211ENST00000592965 PPFIA4O75335 1185 aa26.86■■□□□ 1.89
MBD3-211ENST00000592965 ZNF286BP0CG31 522 aa26.86■■□□□ 1.89
MBD3-211ENST00000592965 SP2Q02086 613 aa26.86■■□□□ 1.89
MBD3-211ENST00000592965 SPATA33Q96N06 139 aa26.86■■□□□ 1.89
MBD3-211ENST00000592965 INPP4AQ96PE3 977 aaPredicted RBP26.86■■□□□ 1.89
MBD3-211ENST00000592965 GTF2IRD1Q9UHL9 959 aa26.86■■□□□ 1.89
MBD3-211ENST00000592965 SLC12A7Q9Y666 1083 aa26.86■■□□□ 1.89
MBD3-211ENST00000592965 RXRAP19793 462 aa26.85■■□□□ 1.89
MBD3-211ENST00000592965 MRPS9P82933 396 aaKnown RBP26.85■■□□□ 1.89
MBD3-211ENST00000592965 MFSD10Q14728 455 aa26.85■■□□□ 1.89
MBD3-211ENST00000592965 GNPTABQ3T906 1256 aa26.85■■□□□ 1.89
MBD3-211ENST00000592965 DEFB128Q7Z7B8 93 aa26.85■■□□□ 1.89
MBD3-211ENST00000592965 C7orf31Q8N865 590 aa26.85■■□□□ 1.89
MBD3-211ENST00000592965 CUL5Q93034 780 aa26.85■■□□□ 1.89
MBD3-211ENST00000592965 LRRC2Q9BYS8 371 aa26.85■■□□□ 1.89
MBD3-211ENST00000592965 DOCK5Q9H7D0 1870 aa26.85■■□□□ 1.89
MBD3-211ENST00000592965 CDC45O75419 566 aa26.84■■□□□ 1.89
MBD3-211ENST00000592965 ICAM3P32942 547 aa26.84■■□□□ 1.89
MBD3-211ENST00000592965 RBL2Q08999 1139 aa26.84■■□□□ 1.89
MBD3-211ENST00000592965 KIAA0753Q2KHM9 967 aa26.84■■□□□ 1.89
MBD3-211ENST00000592965 HSDL1Q3SXM5 330 aa26.84■■□□□ 1.89
MBD3-211ENST00000592965 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.84■■□□□ 1.89
MBD3-211ENST00000592965 AFAP1L1Q8TED9 768 aa26.84■■□□□ 1.89
MBD3-211ENST00000592965 GPKOWQ92917 476 aaPredicted RBP eCLIP26.84■■□□□ 1.89
MBD3-211ENST00000592965 HDAC6Q9UBN7 1215 aa26.84■■□□□ 1.89
MBD3-211ENST00000592965 TRANK1O15050 2925 aa26.83■■□□□ 1.89
MBD3-211ENST00000592965 ZBBXA8MT70 800 aa26.83■■□□□ 1.89
MBD3-211ENST00000592965 MEIS2O14770 477 aa26.83■■□□□ 1.89
MBD3-211ENST00000592965 ACTN1P12814 892 aa26.83■■□□□ 1.89
MBD3-211ENST00000592965 XRRA1Q6P2D8 792 aa26.83■■□□□ 1.89
MBD3-211ENST00000592965 USP17L6PQ6QN14 398 aa26.83■■□□□ 1.89
MBD3-211ENST00000592965 TMTC3Q6ZXV5 915 aa26.83■■□□□ 1.89
MBD3-211ENST00000592965 FANCBQ8NB91 859 aa26.83■■□□□ 1.89
MBD3-211ENST00000592965 SMARCC2Q8TAQ2 1214 aa26.83■■□□□ 1.89
MBD3-211ENST00000592965 ZFP91Q96JP5 570 aaPredicted RBP26.83■■□□□ 1.89
MBD3-211ENST00000592965 DLL1O00548 723 aa26.82■■□□□ 1.88
MBD3-211ENST00000592965 PCNX4Q63HM2 1172 aa26.82■■□□□ 1.88
MBD3-211ENST00000592965 CMTR1Q8N1G2 835 aaKnown RBP26.82■■□□□ 1.88
MBD3-211ENST00000592965 DHX38Q92620 1227 aaKnown RBP26.82■■□□□ 1.88
MBD3-211ENST00000592965 NEK1Q96PY6 1258 aa26.82■■□□□ 1.88
MBD3-211ENST00000592965 ALG1Q9BT22 464 aa26.82■■□□□ 1.88
MBD3-211ENST00000592965 MLXIPQ9HAP2 919 aa26.82■■□□□ 1.88
MBD3-211ENST00000592965 YBX2Q9Y2T7 364 aaKnown RBP26.82■■□□□ 1.88
MBD3-211ENST00000592965 SPATA31C2B4DYI2 1134 aa26.81■■□□□ 1.88
MBD3-211ENST00000592965 FIBPO43427 364 aa26.81■■□□□ 1.88
MBD3-211ENST00000592965 SORBS3O60504 671 aa26.81■■□□□ 1.88
MBD3-211ENST00000592965 ATP2A2P16615 1042 aaKnown RBP26.81■■□□□ 1.88
MBD3-211ENST00000592965 TSGA10IPQ3SY00 556 aa26.81■■□□□ 1.88
MBD3-211ENST00000592965 MICU3Q86XE3 530 aa26.81■■□□□ 1.88
MBD3-211ENST00000592965 RAB11FIP4Q86YS3 637 aa26.81■■□□□ 1.88
MBD3-211ENST00000592965 PCDHA11Q9Y5I1 949 aa26.81■■□□□ 1.88
MBD3-211ENST00000592965 SELPP16109 830 aa26.8■■□□□ 1.88
MBD3-211ENST00000592965 SEMA3FQ13275 785 aa26.8■■□□□ 1.88
MBD3-211ENST00000592965 NEDD9Q14511 834 aa26.8■■□□□ 1.88
MBD3-211ENST00000592965 METTL7BQ6UX53 244 aa26.8■■□□□ 1.88
MBD3-211ENST00000592965 C16orf70Q9BSU1 422 aa26.8■■□□□ 1.88
MBD3-211ENST00000592965 NKX2-4Q9H2Z4 354 aa26.8■■□□□ 1.88
MBD3-211ENST00000592965 PARNO95453 639 aaKnown RBP26.79■■□□□ 1.88
MBD3-211ENST00000592965 EXOSC10Q01780 885 aaKnown RBP26.79■■□□□ 1.88
MBD3-211ENST00000592965 PTK7Q13308 1070 aa26.79■■□□□ 1.88
MBD3-211ENST00000592965 APOA5Q6Q788 366 aa26.79■■□□□ 1.88
MBD3-211ENST00000592965 SYNE3Q6ZMZ3 975 aa26.79■■□□□ 1.88
MBD3-211ENST00000592965 LRRC8DQ7L1W4 858 aa26.79■■□□□ 1.88
MBD3-211ENST00000592965 RASEFQ8IZ41 740 aa26.79■■□□□ 1.88
MBD3-211ENST00000592965 SLC9A7Q96T83 725 aa26.79■■□□□ 1.88
MBD3-211ENST00000592965 FTOQ9C0B1 505 aaKnown RBP eCLIP26.79■■□□□ 1.88
MBD3-211ENST00000592965 PSTPIP2Q9H939 334 aa26.79■■□□□ 1.88
MBD3-211ENST00000592965 SLC28A3Q9HAS3 691 aa26.79■■□□□ 1.88
MBD3-211ENST00000592965 BAIAP3O94812 1187 aa26.78■■□□□ 1.88
MBD3-211ENST00000592965 CKBP12277 381 aa26.78■■□□□ 1.88
MBD3-211ENST00000592965 RABGGTBP53611 331 aa26.78■■□□□ 1.88
MBD3-211ENST00000592965 KRT32Q14532 448 aa26.78■■□□□ 1.88
MBD3-211ENST00000592965 DHX32Q7L7V1 743 aaKnown RBP26.78■■□□□ 1.88
MBD3-211ENST00000592965 RTEL1Q9NZ71 1219 aa26.78■■□□□ 1.88
MBD3-211ENST00000592965 TTC28Q96AY4 2481 aa26.77■■□□□ 1.88
MBD3-211ENST00000592965 PTPRSQ13332 1948 aa26.77■■□□□ 1.88
MBD3-211ENST00000592965 NOP56O00567 594 aaKnown RBP26.77■■□□□ 1.88
MBD3-211ENST00000592965 LGALS2P05162 132 aa26.77■■□□□ 1.88
MBD3-211ENST00000592965 GPNMBQ14956 572 aa26.77■■□□□ 1.88
MBD3-211ENST00000592965 TRIM71Q2Q1W2 868 aaKnown RBP26.77■■□□□ 1.88
MBD3-211ENST00000592965 PHOSPHO2Q8TCD6 241 aa26.77■■□□□ 1.88
MBD3-211ENST00000592965 GAS2L1Q99501 681 aaPredicted RBP26.77■■□□□ 1.88
MBD3-211ENST00000592965 SENP7Q9BQF6 1050 aa26.77■■□□□ 1.88
MBD3-211ENST00000592965 PRDM12Q9H4Q4 367 aa26.77■■□□□ 1.88
MBD3-211ENST00000592965 BCAS3Q9H6U6 928 aa26.77■■□□□ 1.88
MBD3-211ENST00000592965 RBM28Q9NW13 759 aaKnown RBP26.77■■□□□ 1.88
MBD3-211ENST00000592965 VCANP13611 3396 aa26.77■■□□□ 1.88
MBD3-211ENST00000592965 CNTNAP5Q8WYK1 1306 aa26.76■■□□□ 1.87
MBD3-211ENST00000592965 hCG_1642624A0A1W2PR95 340 aa26.76■■□□□ 1.87
MBD3-211ENST00000592965 H3BRB1 525 aa26.76■■□□□ 1.87
MBD3-211ENST00000592965 HOXC8P31273 242 aa26.76■■□□□ 1.87
MBD3-211ENST00000592965 CYFIP1Q7L576 1253 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms