RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 MYCLP12524 364 aaPredicted RBP25.55■■□□□ 1.68
SNF8-216ENST00000573795 DEFB103AP81534 67 aa25.55■■□□□ 1.68
SNF8-216ENST00000573795 TFF2Q03403 129 aa25.55■■□□□ 1.68
SNF8-216ENST00000573795 PTH1RQ03431 593 aa25.55■■□□□ 1.68
SNF8-216ENST00000573795 GRM4Q14833 912 aa25.55■■□□□ 1.68
SNF8-216ENST00000573795 PGM5Q15124 567 aa25.55■■□□□ 1.68
SNF8-216ENST00000573795 KIAA0753Q2KHM9 967 aa25.55■■□□□ 1.68
SNF8-216ENST00000573795 MYSM1Q5VVJ2 828 aa25.55■■□□□ 1.68
SNF8-216ENST00000573795 VSIG10LQ86VR7 867 aa25.55■■□□□ 1.68
SNF8-216ENST00000573795 DHX37Q8IY37 1157 aaKnown RBP25.55■■□□□ 1.68
SNF8-216ENST00000573795 C7orf31Q8N865 590 aa25.55■■□□□ 1.68
SNF8-216ENST00000573795 ARNTL2Q8WYA1 636 aa25.55■■□□□ 1.68
SNF8-216ENST00000573795 UHRF1Q96T88 793 aaPredicted RBP25.55■■□□□ 1.68
SNF8-216ENST00000573795 KATNAL1Q9BW62 490 aa25.55■■□□□ 1.68
SNF8-216ENST00000573795 RIOX1Q9H6W3 641 aa25.55■■□□□ 1.68
SNF8-216ENST00000573795 MAP3K20Q9NYL2 800 aaKnown RBP25.55■■□□□ 1.68
SNF8-216ENST00000573795 CYTH3O43739 400 aa25.54■■□□□ 1.68
SNF8-216ENST00000573795 SORBS3O60504 671 aa25.54■■□□□ 1.68
SNF8-216ENST00000573795 ZNF200P98182 395 aaPredicted RBP25.54■■□□□ 1.68
SNF8-216ENST00000573795 SP2Q02086 613 aa25.54■■□□□ 1.68
SNF8-216ENST00000573795 HSDL1Q3SXM5 330 aa25.54■■□□□ 1.68
SNF8-216ENST00000573795 CNKSR3Q6P9H4 555 aa25.54■■□□□ 1.68
SNF8-216ENST00000573795 GPKOWQ92917 476 aaPredicted RBP eCLIP25.54■■□□□ 1.68
SNF8-216ENST00000573795 PIGSQ96S52 555 aa25.54■■□□□ 1.68
SNF8-216ENST00000573795 LPXNO60711 386 aa25.53■■□□□ 1.68
SNF8-216ENST00000573795 BMP1P13497 986 aa25.53■■□□□ 1.68
SNF8-216ENST00000573795 UBA1P22314 1058 aaKnown RBP25.53■■□□□ 1.68
SNF8-216ENST00000573795 KCNJ6P48051 423 aa25.53■■□□□ 1.68
SNF8-216ENST00000573795 PTK7Q13308 1070 aa25.53■■□□□ 1.68
SNF8-216ENST00000573795 MBTPS1Q14703 1052 aa25.53■■□□□ 1.68
SNF8-216ENST00000573795 CELF3Q5SZQ8 465 aaKnown RBP25.53■■□□□ 1.68
SNF8-216ENST00000573795 HOMER1Q86YM7 354 aa25.53■■□□□ 1.68
SNF8-216ENST00000573795 ZFP91Q96JP5 570 aaPredicted RBP25.53■■□□□ 1.68
SNF8-216ENST00000573795 KIF28PB7ZC32 967 aa25.52■■□□□ 1.68
SNF8-216ENST00000573795 TLL1O43897 1013 aa25.52■■□□□ 1.68
SNF8-216ENST00000573795 GGPS1O95749 300 aa25.52■■□□□ 1.68
SNF8-216ENST00000573795 SAMD3Q8N6K7 520 aa25.52■■□□□ 1.68
SNF8-216ENST00000573795 NECAB3Q96P71 396 aaPredicted RBP25.52■■□□□ 1.68
SNF8-216ENST00000573795 TSPYL2Q9H2G4 693 aaPredicted RBP25.52■■□□□ 1.68
SNF8-216ENST00000573795 DOCK5Q9H7D0 1870 aa25.51■■□□□ 1.67
SNF8-216ENST00000573795 GTPBP6O43824 516 aaPredicted RBP25.51■■□□□ 1.67
SNF8-216ENST00000573795 PARNO95453 639 aaKnown RBP25.51■■□□□ 1.67
SNF8-216ENST00000573795 TROAPQ12815 778 aa25.51■■□□□ 1.67
SNF8-216ENST00000573795 GRB10Q13322 594 aa25.51■■□□□ 1.67
SNF8-216ENST00000573795 ZNF618Q5T7W0 954 aa25.51■■□□□ 1.67
SNF8-216ENST00000573795 SPATA33Q96N06 139 aa25.51■■□□□ 1.67
SNF8-216ENST00000573795 C16orf70Q9BSU1 422 aa25.51■■□□□ 1.67
SNF8-216ENST00000573795 BCAS3Q9H6U6 928 aa25.51■■□□□ 1.67
SNF8-216ENST00000573795 PPFIA4O75335 1185 aa25.5■■□□□ 1.67
SNF8-216ENST00000573795 CHMLP26374 656 aa25.5■■□□□ 1.67
SNF8-216ENST00000573795 KCNQ1P51787 676 aa25.5■■□□□ 1.67
SNF8-216ENST00000573795 FRMPD4Q14CM0 1322 aa25.5■■□□□ 1.67
SNF8-216ENST00000573795 KCNV1Q6PIU1 500 aa25.5■■□□□ 1.67
SNF8-216ENST00000573795 MICAL3Q7RTP6 2002 aa25.49■■□□□ 1.67
SNF8-216ENST00000573795 SIP14410 1827 aa25.49■■□□□ 1.67
SNF8-216ENST00000573795 GCOM1H8Y6P7 765 aaPredicted RBP25.49■■□□□ 1.67
SNF8-216ENST00000573795 IFIT3O14879 490 aaKnown RBP25.49■■□□□ 1.67
SNF8-216ENST00000573795 POLR2MP0CAP2 368 aa25.49■■□□□ 1.67
SNF8-216ENST00000573795 TRDNQ13061 729 aa25.49■■□□□ 1.67
SNF8-216ENST00000573795 U3KPZ7 1027 aaPredicted RBP25.49■■□□□ 1.67
SNF8-216ENST00000573795 E7EWF7 191 aa25.48■■□□□ 1.67
SNF8-216ENST00000573795 GJB5O95377 273 aa25.48■■□□□ 1.67
SNF8-216ENST00000573795 CCND2P30279 289 aa25.48■■□□□ 1.67
SNF8-216ENST00000573795 HOXC8P31273 242 aa25.48■■□□□ 1.67
SNF8-216ENST00000573795 ANTXR2P58335 489 aa25.48■■□□□ 1.67
SNF8-216ENST00000573795 MKRN4PQ13434 485 aaPredicted RBP25.48■■□□□ 1.67
SNF8-216ENST00000573795 SKIV2LQ15477 1246 aaKnown RBP25.48■■□□□ 1.67
SNF8-216ENST00000573795 FCHSD1Q86WN1 690 aa25.48■■□□□ 1.67
SNF8-216ENST00000573795 PNMA6FA0A0J9YX94 578 aa25.47■■□□□ 1.67
SNF8-216ENST00000573795 ABHD14A-ACY1A0A1B0GW23 586 aa25.47■■□□□ 1.67
SNF8-216ENST00000573795 TGFB3P10600 412 aa25.47■■□□□ 1.67
SNF8-216ENST00000573795 MRPS9P82933 396 aaKnown RBP25.47■■□□□ 1.67
SNF8-216ENST00000573795 WTAPQ15007 396 aa25.47■■□□□ 1.67
SNF8-216ENST00000573795 SERINC5Q86VE9 423 aa25.47■■□□□ 1.67
SNF8-216ENST00000573795 IL27Q8NEV9 243 aa25.47■■□□□ 1.67
SNF8-216ENST00000573795 BRWD1Q9NSI6 2320 aa25.46■■□□□ 1.67
SNF8-216ENST00000573795 SEMA3FQ13275 785 aa25.46■■□□□ 1.67
SNF8-216ENST00000573795 GDPD5Q8WTR4 605 aa25.46■■□□□ 1.67
SNF8-216ENST00000573795 SGSM2O43147 1006 aa25.45■■□□□ 1.66
SNF8-216ENST00000573795 TRAF1Q13077 416 aa25.45■■□□□ 1.66
SNF8-216ENST00000573795 MB21D2Q8IYB1 491 aaPredicted RBP25.45■■□□□ 1.66
SNF8-216ENST00000573795 NCOA7Q8NI08 942 aa25.45■■□□□ 1.66
SNF8-216ENST00000573795 IGDCC4Q8TDY8 1250 aa25.45■■□□□ 1.66
SNF8-216ENST00000573795 RUFY2Q8WXA3 655 aa25.45■■□□□ 1.66
SNF8-216ENST00000573795 INPP4AQ96PE3 977 aaPredicted RBP25.45■■□□□ 1.66
SNF8-216ENST00000573795 RAD9AQ99638 391 aa25.45■■□□□ 1.66
SNF8-216ENST00000573795 ZBED2Q9BTP6 218 aa25.45■■□□□ 1.66
SNF8-216ENST00000573795 LINC01553A4QN01 128 aa25.44■■□□□ 1.66
SNF8-216ENST00000573795 LGR5O75473 907 aa25.44■■□□□ 1.66
SNF8-216ENST00000573795 LGALS2P05162 132 aa25.44■■□□□ 1.66
SNF8-216ENST00000573795 COL9A1P20849 921 aa25.44■■□□□ 1.66
SNF8-216ENST00000573795 ICAM3P32942 547 aa25.44■■□□□ 1.66
SNF8-216ENST00000573795 IKBKEQ14164 716 aa25.44■■□□□ 1.66
SNF8-216ENST00000573795 AAK1Q2M2I8 961 aa25.44■■□□□ 1.66
SNF8-216ENST00000573795 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.44■■□□□ 1.66
SNF8-216ENST00000573795 RALYLQ86SE5 291 aaKnown RBP25.44■■□□□ 1.66
SNF8-216ENST00000573795 MLXIPQ9HAP2 919 aa25.44■■□□□ 1.66
SNF8-216ENST00000573795 COG5Q9UP83 839 aa25.44■■□□□ 1.66
SNF8-216ENST00000573795 TELO2Q9Y4R8 837 aa25.44■■□□□ 1.66
SNF8-216ENST00000573795 ERICH2A1L162 156 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms