RNA–Protein interactions for RNA: ENST00000559778.5

CPNE6-213, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-213ENST00000559778 ANTXR2P58335 489 aa19■□□□□ 0.63
CPNE6-213ENST00000559778 IRX6P78412 446 aaPredicted RBP19■□□□□ 0.63
CPNE6-213ENST00000559778 GDF6Q6KF10 455 aaPredicted RBP19■□□□□ 0.63
CPNE6-213ENST00000559778 PHOSPHO2Q8TCD6 241 aa19■□□□□ 0.63
CPNE6-213ENST00000559778 CTAGE1Q96RT6 745 aa19■□□□□ 0.63
CPNE6-213ENST00000559778 UHRF1Q96T88 793 aaPredicted RBP19■□□□□ 0.63
CPNE6-213ENST00000559778 RBM8AQ9Y5S9 174 aaKnown RBP19■□□□□ 0.63
CPNE6-213ENST00000559778 MICAL3Q7RTP6 2002 aa19■□□□□ 0.63
CPNE6-213ENST00000559778 FRMPD4Q14CM0 1322 aa19■□□□□ 0.63
CPNE6-213ENST00000559778 HAS3O00219 553 aa18.99■□□□□ 0.63
CPNE6-213ENST00000559778 PPFIA4O75335 1185 aa18.99■□□□□ 0.63
CPNE6-213ENST00000559778 STAM2O75886 525 aa18.99■□□□□ 0.63
CPNE6-213ENST00000559778 DDAH1O94760 285 aa18.99■□□□□ 0.63
CPNE6-213ENST00000559778 BAIAP3O94812 1187 aa18.99■□□□□ 0.63
CPNE6-213ENST00000559778 MYCLP12524 364 aaPredicted RBP18.99■□□□□ 0.63
CPNE6-213ENST00000559778 SMARCA1P28370 1054 aa18.99■□□□□ 0.63
CPNE6-213ENST00000559778 CCND2P30279 289 aa18.99■□□□□ 0.63
CPNE6-213ENST00000559778 PSEN2P49810 448 aa18.99■□□□□ 0.63
CPNE6-213ENST00000559778 CELF3Q5SZQ8 465 aaKnown RBP18.99■□□□□ 0.63
CPNE6-213ENST00000559778 MYSM1Q5VVJ2 828 aa18.99■□□□□ 0.63
CPNE6-213ENST00000559778 C7orf31Q8N865 590 aa18.99■□□□□ 0.63
CPNE6-213ENST00000559778 PPP1R13LQ8WUF5 828 aa18.99■□□□□ 0.63
CPNE6-213ENST00000559778 SPZ1Q9BXG8 430 aa18.99■□□□□ 0.63
CPNE6-213ENST00000559778 SIP14410 1827 aa18.99■□□□□ 0.63
CPNE6-213ENST00000559778 CHMP4BP1P59074 171 aa18.98■□□□□ 0.63
CPNE6-213ENST00000559778 MFSD10Q14728 455 aa18.98■□□□□ 0.63
CPNE6-213ENST00000559778 IL31RAQ8NI17 732 aa18.98■□□□□ 0.63
CPNE6-213ENST00000559778 LY9Q9HBG7 655 aa18.98■□□□□ 0.63
CPNE6-213ENST00000559778 SELPP16109 830 aa18.97■□□□□ 0.63
CPNE6-213ENST00000559778 UBA1P22314 1058 aaKnown RBP18.97■□□□□ 0.63
CPNE6-213ENST00000559778 KIF5BP33176 963 aa18.97■□□□□ 0.63
CPNE6-213ENST00000559778 KIAA0753Q2KHM9 967 aa18.97■□□□□ 0.63
CPNE6-213ENST00000559778 GNPTABQ3T906 1256 aa18.97■□□□□ 0.63
CPNE6-213ENST00000559778 CASC1Q6TDU7 716 aa18.97■□□□□ 0.63
CPNE6-213ENST00000559778 ZNF654Q8IZM8 581 aa18.97■□□□□ 0.63
CPNE6-213ENST00000559778 TMTC2Q8N394 836 aa18.97■□□□□ 0.63
CPNE6-213ENST00000559778 IL27Q8NEV9 243 aa18.97■□□□□ 0.63
CPNE6-213ENST00000559778 CTCFLQ8NI51 663 aaPredicted RBP18.97■□□□□ 0.63
CPNE6-213ENST00000559778 FTOQ9C0B1 505 aaKnown RBP eCLIP18.97■□□□□ 0.63
CPNE6-213ENST00000559778 TSPYL2Q9H2G4 693 aaPredicted RBP18.97■□□□□ 0.63
CPNE6-213ENST00000559778 HDAC6Q9UBN7 1215 aa18.97■□□□□ 0.63
CPNE6-213ENST00000559778 GGPS1O95749 300 aa18.96■□□□□ 0.63
CPNE6-213ENST00000559778 ZNF286BP0CG31 522 aa18.96■□□□□ 0.63
CPNE6-213ENST00000559778 MCM5P33992 734 aa18.96■□□□□ 0.63
CPNE6-213ENST00000559778 PTK7Q13308 1070 aa18.96■□□□□ 0.63
CPNE6-213ENST00000559778 HSDL1Q3SXM5 330 aa18.96■□□□□ 0.63
CPNE6-213ENST00000559778 LRRC8DQ7L1W4 858 aa18.96■□□□□ 0.63
CPNE6-213ENST00000559778 FCHSD1Q86WN1 690 aa18.96■□□□□ 0.63
CPNE6-213ENST00000559778 MICALL1Q8N3F8 863 aa18.96■□□□□ 0.63
CPNE6-213ENST00000559778 DHX38Q92620 1227 aaKnown RBP18.96■□□□□ 0.63
CPNE6-213ENST00000559778 TMEM87BQ96K49 555 aa18.96■□□□□ 0.63
CPNE6-213ENST00000559778 SPATA33Q96N06 139 aa18.96■□□□□ 0.63
CPNE6-213ENST00000559778 LZTS2Q9BRK4 669 aa18.96■□□□□ 0.63
CPNE6-213ENST00000559778 BRWD1Q9NSI6 2320 aa18.96■□□□□ 0.63
CPNE6-213ENST00000559778 CXCL10P02778 98 aa18.95■□□□□ 0.62
CPNE6-213ENST00000559778 CA3P07451 260 aa18.95■□□□□ 0.62
CPNE6-213ENST00000559778 POU3F3P20264 500 aaPredicted RBP18.95■□□□□ 0.62
CPNE6-213ENST00000559778 ICAM3P32942 547 aa18.95■□□□□ 0.62
CPNE6-213ENST00000559778 GNAQP50148 359 aa18.95■□□□□ 0.62
CPNE6-213ENST00000559778 SP2Q02086 613 aa18.95■□□□□ 0.62
CPNE6-213ENST00000559778 RRP36Q96EU6 259 aaKnown RBP18.95■□□□□ 0.62
CPNE6-213ENST00000559778 INPP4AQ96PE3 977 aaPredicted RBP18.95■□□□□ 0.62
CPNE6-213ENST00000559778 ALG1Q9BT22 464 aa18.95■□□□□ 0.62
CPNE6-213ENST00000559778 LSG1Q9H089 658 aaKnown RBP18.95■□□□□ 0.62
CPNE6-213ENST00000559778 PIK3CDO00329 1044 aa18.94■□□□□ 0.62
CPNE6-213ENST00000559778 PRC1O43663 620 aa18.94■□□□□ 0.62
CPNE6-213ENST00000559778 CALM1P0DP23 149 aa18.94■□□□□ 0.62
CPNE6-213ENST00000559778 CALM2P0DP24 149 aa18.94■□□□□ 0.62
CPNE6-213ENST00000559778 CALM3P0DP25 149 aa18.94■□□□□ 0.62
CPNE6-213ENST00000559778 CKBP12277 381 aa18.94■□□□□ 0.62
CPNE6-213ENST00000559778 BMP1P13497 986 aa18.94■□□□□ 0.62
CPNE6-213ENST00000559778 LIFRP42702 1097 aa18.94■□□□□ 0.62
CPNE6-213ENST00000559778 TFF2Q03403 129 aa18.94■□□□□ 0.62
CPNE6-213ENST00000559778 CNKSR3Q6P9H4 555 aa18.94■□□□□ 0.62
CPNE6-213ENST00000559778 HERC6Q8IVU3 1022 aa18.94■□□□□ 0.62
CPNE6-213ENST00000559778 ESYT1Q9BSJ8 1104 aa18.94■□□□□ 0.62
CPNE6-213ENST00000559778 C16orf70Q9BSU1 422 aa18.94■□□□□ 0.62
CPNE6-213ENST00000559778 MLXIPQ9HAP2 919 aa18.94■□□□□ 0.62
CPNE6-213ENST00000559778 SEC63Q9UGP8 760 aaKnown RBP18.94■□□□□ 0.62
CPNE6-213ENST00000559778 RAPGEFL1Q9UHV5 662 aa18.94■□□□□ 0.62
CPNE6-213ENST00000559778 KIF28PB7ZC32 967 aa18.93■□□□□ 0.62
CPNE6-213ENST00000559778 SH2B2O14492 632 aaPredicted RBP18.93■□□□□ 0.62
CPNE6-213ENST00000559778 KCNJ6P48051 423 aa18.93■□□□□ 0.62
CPNE6-213ENST00000559778 MRPS9P82933 396 aaKnown RBP18.93■□□□□ 0.62
CPNE6-213ENST00000559778 NEDD9Q14511 834 aa18.93■□□□□ 0.62
CPNE6-213ENST00000559778 GPNMBQ14956 572 aa18.93■□□□□ 0.62
CPNE6-213ENST00000559778 TRIM71Q2Q1W2 868 aaKnown RBP18.93■□□□□ 0.62
CPNE6-213ENST00000559778 XRRA1Q6P2D8 792 aa18.93■□□□□ 0.62
CPNE6-213ENST00000559778 CUL5Q93034 780 aa18.93■□□□□ 0.62
CPNE6-213ENST00000559778 NECAB3Q96P71 396 aaPredicted RBP18.93■□□□□ 0.62
CPNE6-213ENST00000559778 MTCH2Q9Y6C9 303 aa18.93■□□□□ 0.62
CPNE6-213ENST00000559778 CCDC69A6NI79 296 aa18.92■□□□□ 0.62
CPNE6-213ENST00000559778 SPATA31C2B4DYI2 1134 aa18.92■□□□□ 0.62
CPNE6-213ENST00000559778 RFXAPO00287 272 aa18.92■□□□□ 0.62
CPNE6-213ENST00000559778 SLC27A2O14975 620 aa18.92■□□□□ 0.62
CPNE6-213ENST00000559778 FIBPO43427 364 aa18.92■□□□□ 0.62
CPNE6-213ENST00000559778 EFCAB14O75071 495 aa18.92■□□□□ 0.62
CPNE6-213ENST00000559778 HOXC8P31273 242 aa18.92■□□□□ 0.62
CPNE6-213ENST00000559778 WDR5P61964 334 aaKnown RBP18.92■□□□□ 0.62
CPNE6-213ENST00000559778 NECTIN1Q15223 517 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms