RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 KRT32Q14532 448 aa13.73□□□□□ -0.21
HERC1-202ENST00000558324 MFSD10Q14728 455 aa13.73□□□□□ -0.21
HERC1-202ENST00000558324 UBE2SQ16763 222 aa13.73□□□□□ -0.21
HERC1-202ENST00000558324 KIAA0753Q2KHM9 967 aa13.73□□□□□ -0.21
HERC1-202ENST00000558324 GNPTABQ3T906 1256 aa13.73□□□□□ -0.21
HERC1-202ENST00000558324 DHX32Q7L7V1 743 aaKnown RBP13.73□□□□□ -0.21
HERC1-202ENST00000558324 SGMS1Q86VZ5 419 aa13.73□□□□□ -0.21
HERC1-202ENST00000558324 RPUSD2Q8IZ73 545 aaKnown RBP13.73□□□□□ -0.21
HERC1-202ENST00000558324 C7orf31Q8N865 590 aa13.73□□□□□ -0.21
HERC1-202ENST00000558324 RETREG2Q8NC44 543 aa13.73□□□□□ -0.21
HERC1-202ENST00000558324 MYLIPQ8WY64 445 aa13.73□□□□□ -0.21
HERC1-202ENST00000558324 KATNAL1Q9BW62 490 aa13.73□□□□□ -0.21
HERC1-202ENST00000558324 PBX4Q9BYU1 374 aa13.73□□□□□ -0.21
HERC1-202ENST00000558324 BCAS3Q9H6U6 928 aa13.73□□□□□ -0.21
HERC1-202ENST00000558324 MLXIPQ9HAP2 919 aa13.73□□□□□ -0.21
HERC1-202ENST00000558324 HDAC6Q9UBN7 1215 aa13.73□□□□□ -0.21
HERC1-202ENST00000558324 BRPF3Q9ULD4 1205 aa13.73□□□□□ -0.21
HERC1-202ENST00000558324 CNTNAP5Q8WYK1 1306 aa13.72□□□□□ -0.21
HERC1-202ENST00000558324 KLF18A0A0U1RQI7 1052 aa13.72□□□□□ -0.21
HERC1-202ENST00000558324 MEIS2O14770 477 aa13.72□□□□□ -0.21
HERC1-202ENST00000558324 ZBTB43O43298 467 aa13.72□□□□□ -0.21
HERC1-202ENST00000558324 FGD1P98174 961 aa13.72□□□□□ -0.21
HERC1-202ENST00000558324 EXOSC10Q01780 885 aaKnown RBP13.72□□□□□ -0.21
HERC1-202ENST00000558324 SP4Q02446 784 aa13.72□□□□□ -0.21
HERC1-202ENST00000558324 BFSP2Q13515 415 aa13.72□□□□□ -0.21
HERC1-202ENST00000558324 RTN1Q16799 776 aa13.72□□□□□ -0.21
HERC1-202ENST00000558324 VWCEQ96DN2 955 aa13.72□□□□□ -0.21
HERC1-202ENST00000558324 INPP4AQ96PE3 977 aaPredicted RBP13.72□□□□□ -0.21
HERC1-202ENST00000558324 PSTPIP2Q9H939 334 aa13.72□□□□□ -0.21
HERC1-202ENST00000558324 GTF2IRD1Q9UHL9 959 aa13.72□□□□□ -0.21
HERC1-202ENST00000558324 GOLGA8AA7E2F4 631 aa13.71□□□□□ -0.21
HERC1-202ENST00000558324 GOLGA8BA8MQT2 603 aa13.71□□□□□ -0.21
HERC1-202ENST00000558324 RBAK-RBAKDNI3L0D1 243 aa13.71□□□□□ -0.21
HERC1-202ENST00000558324 PIK3CDO00329 1044 aa13.71□□□□□ -0.21
HERC1-202ENST00000558324 PITPNM1O00562 1244 aa13.71□□□□□ -0.21
HERC1-202ENST00000558324 NOP56O00567 594 aaKnown RBP13.71□□□□□ -0.21
HERC1-202ENST00000558324 FIBPO43427 364 aa13.71□□□□□ -0.21
HERC1-202ENST00000558324 IQCF3P0C7M6 154 aa13.71□□□□□ -0.21
HERC1-202ENST00000558324 TGFB3P10600 412 aa13.71□□□□□ -0.21
HERC1-202ENST00000558324 FOSL2P15408 326 aa13.71□□□□□ -0.21
HERC1-202ENST00000558324 SEMA3FQ13275 785 aa13.71□□□□□ -0.21
HERC1-202ENST00000558324 TSGA10IPQ3SY00 556 aa13.71□□□□□ -0.21
HERC1-202ENST00000558324 PCNX4Q63HM2 1172 aa13.71□□□□□ -0.21
HERC1-202ENST00000558324 CYFIP1Q7L576 1253 aa13.71□□□□□ -0.21
HERC1-202ENST00000558324 SESTD1Q86VW0 696 aa13.71□□□□□ -0.21
HERC1-202ENST00000558324 CCDC155Q8N6L0 562 aa13.71□□□□□ -0.21
HERC1-202ENST00000558324 JAKMIP1Q96N16 626 aaKnown RBP13.71□□□□□ -0.21
HERC1-202ENST00000558324 CTAGE1Q96RT6 745 aa13.71□□□□□ -0.21
HERC1-202ENST00000558324 FTOQ9C0B1 505 aaKnown RBP eCLIP13.71□□□□□ -0.21
HERC1-202ENST00000558324 ZNF576Q9H609 170 aa13.71□□□□□ -0.21
HERC1-202ENST00000558324 RBM28Q9NW13 759 aaKnown RBP13.71□□□□□ -0.21
HERC1-202ENST00000558324 SLC4A7Q9Y6M7 1214 aa13.71□□□□□ -0.21
HERC1-202ENST00000558324 COL6A3P12111 3177 aa13.71□□□□□ -0.21
HERC1-202ENST00000558324 TANC1Q9C0D5 1861 aa13.7□□□□□ -0.22
HERC1-202ENST00000558324 TMEM265A0A087WTH1 108 aa13.7□□□□□ -0.22
HERC1-202ENST00000558324 SPDYE3A6NKU9 549 aa13.7□□□□□ -0.22
HERC1-202ENST00000558324 SPATA31C2B4DYI2 1134 aa13.7□□□□□ -0.22
HERC1-202ENST00000558324 HAS3O00219 553 aa13.7□□□□□ -0.22
HERC1-202ENST00000558324 PPFIA4O75335 1185 aa13.7□□□□□ -0.22
HERC1-202ENST00000558324 STAM2O75886 525 aa13.7□□□□□ -0.22
HERC1-202ENST00000558324 PFKMP08237 780 aa13.7□□□□□ -0.22
HERC1-202ENST00000558324 HOXD8P13378 290 aaPredicted RBP13.7□□□□□ -0.22
HERC1-202ENST00000558324 RABGGTBP53611 331 aa13.7□□□□□ -0.22
HERC1-202ENST00000558324 NAPAP54920 295 aa13.7□□□□□ -0.22
HERC1-202ENST00000558324 ZNF200P98182 395 aaPredicted RBP13.7□□□□□ -0.22
HERC1-202ENST00000558324 GRIN2CQ14957 1233 aa13.7□□□□□ -0.22
HERC1-202ENST00000558324 WWC2Q6AWC2 1192 aa13.7□□□□□ -0.22
HERC1-202ENST00000558324 DHX38Q92620 1227 aaKnown RBP13.7□□□□□ -0.22
HERC1-202ENST00000558324 NKX2-4Q9H2Z4 354 aa13.7□□□□□ -0.22
HERC1-202ENST00000558324 PKD2L1Q9P0L9 805 aa13.7□□□□□ -0.22
HERC1-202ENST00000558324 MSRAQ9UJ68 235 aa13.7□□□□□ -0.22
HERC1-202ENST00000558324 TELO2Q9Y4R8 837 aa13.7□□□□□ -0.22
HERC1-202ENST00000558324 SNX14Q9Y5W7 946 aa13.7□□□□□ -0.22
HERC1-202ENST00000558324 LGALS2P05162 132 aa13.69□□□□□ -0.22
HERC1-202ENST00000558324 HMGB1P09429 215 aaKnown RBP13.69□□□□□ -0.22
HERC1-202ENST00000558324 ACTN1P12814 892 aa13.69□□□□□ -0.22
HERC1-202ENST00000558324 ICAM3P32942 547 aa13.69□□□□□ -0.22
HERC1-202ENST00000558324 HSPA4P34932 840 aa13.69□□□□□ -0.22
HERC1-202ENST00000558324 RFC2P35250 354 aa13.69□□□□□ -0.22
HERC1-202ENST00000558324 APOBRQ0VD83 1088 aa13.69□□□□□ -0.22
HERC1-202ENST00000558324 NEDD9Q14511 834 aa13.69□□□□□ -0.22
HERC1-202ENST00000558324 RAB30Q15771 203 aa13.69□□□□□ -0.22
HERC1-202ENST00000558324 UTP14CQ5TAP6 766 aaKnown RBP13.69□□□□□ -0.22
HERC1-202ENST00000558324 TYW1BQ6NUM6 668 aa13.69□□□□□ -0.22
HERC1-202ENST00000558324 METTL7BQ6UX53 244 aa13.69□□□□□ -0.22
HERC1-202ENST00000558324 LRRC8DQ7L1W4 858 aa13.69□□□□□ -0.22
HERC1-202ENST00000558324 NLRX1Q86UT6 975 aa13.69□□□□□ -0.22
HERC1-202ENST00000558324 TRIM50Q86XT4 487 aa13.69□□□□□ -0.22
HERC1-202ENST00000558324 MAFAQ8NHW3 353 aaPredicted RBP13.69□□□□□ -0.22
HERC1-202ENST00000558324 CAGE1Q8TC20 777 aa13.69□□□□□ -0.22
HERC1-202ENST00000558324 PGBD1Q96JS3 809 aa13.69□□□□□ -0.22
HERC1-202ENST00000558324 C16orf70Q9BSU1 422 aa13.69□□□□□ -0.22
HERC1-202ENST00000558324 YBX2Q9Y2T7 364 aaKnown RBP13.69□□□□□ -0.22
HERC1-202ENST00000558324 V9GY48 417 aaPredicted RBP13.69□□□□□ -0.22
HERC1-202ENST00000558324 SCN5AQ14524 2016 aa13.69□□□□□ -0.22
HERC1-202ENST00000558324 CDH23Q9H251 3354 aa13.69□□□□□ -0.22
HERC1-202ENST00000558324 H3BRB1 525 aa13.68□□□□□ -0.22
HERC1-202ENST00000558324 REC8O95072 547 aa13.68□□□□□ -0.22
HERC1-202ENST00000558324 MYOGP15173 224 aa13.68□□□□□ -0.22
HERC1-202ENST00000558324 SELPP16109 830 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms