RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 BCAS3Q9H6U6 928 aa13.73□□□□□ -0.21
TRAPPC6B-204ENST00000554018 SEC63Q9UGP8 760 aaKnown RBP13.73□□□□□ -0.21
TRAPPC6B-204ENST00000554018 SLC12A7Q9Y666 1083 aa13.73□□□□□ -0.21
TRAPPC6B-204ENST00000554018 PTPRSQ13332 1948 aa13.72□□□□□ -0.21
TRAPPC6B-204ENST00000554018 NCOR1O75376 2440 aa13.72□□□□□ -0.21
TRAPPC6B-204ENST00000554018 FRMPD4Q14CM0 1322 aa13.72□□□□□ -0.21
TRAPPC6B-204ENST00000554018 hCG_1642624A0A1W2PR95 340 aa13.72□□□□□ -0.21
TRAPPC6B-204ENST00000554018 PITPNM1O00562 1244 aa13.72□□□□□ -0.21
TRAPPC6B-204ENST00000554018 PPFIA4O75335 1185 aa13.72□□□□□ -0.21
TRAPPC6B-204ENST00000554018 CALM1P0DP23 149 aa13.72□□□□□ -0.21
TRAPPC6B-204ENST00000554018 CALM2P0DP24 149 aa13.72□□□□□ -0.21
TRAPPC6B-204ENST00000554018 CALM3P0DP25 149 aa13.72□□□□□ -0.21
TRAPPC6B-204ENST00000554018 UBA1P22314 1058 aaKnown RBP13.72□□□□□ -0.21
TRAPPC6B-204ENST00000554018 MRPS9P82933 396 aaKnown RBP13.72□□□□□ -0.21
TRAPPC6B-204ENST00000554018 HSDL1Q3SXM5 330 aa13.72□□□□□ -0.21
TRAPPC6B-204ENST00000554018 SESTD1Q86VW0 696 aa13.72□□□□□ -0.21
TRAPPC6B-204ENST00000554018 RASEFQ8IZ41 740 aa13.72□□□□□ -0.21
TRAPPC6B-204ENST00000554018 CCDC82Q8N4S0 544 aa13.72□□□□□ -0.21
TRAPPC6B-204ENST00000554018 RETREG2Q8NC44 543 aa13.72□□□□□ -0.21
TRAPPC6B-204ENST00000554018 HDAC6Q9UBN7 1215 aa13.72□□□□□ -0.21
TRAPPC6B-204ENST00000554018 SLC4A7Q9Y6M7 1214 aa13.72□□□□□ -0.21
TRAPPC6B-204ENST00000554018 ZBBXA8MT70 800 aa13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 MEIS2O14770 477 aa13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 CDC45O75419 566 aa13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 F2P00734 622 aa13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 IQCF3P0C7M6 154 aa13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 TGFB3P10600 412 aa13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 HOXD8P13378 290 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 FOSL2P15408 326 aa13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 RFC2P35250 354 aa13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 RABGGTBP53611 331 aa13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 BFSP2Q13515 415 aa13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 MFSD10Q14728 455 aa13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 KIAA0753Q2KHM9 967 aa13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 RNF20Q5VTR2 975 aa13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 SGMS1Q86VZ5 419 aa13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 C7orf31Q8N865 590 aa13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 FANCBQ8NB91 859 aa13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 MAFAQ8NHW3 353 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 SMARCC2Q8TAQ2 1214 aa13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 DHX38Q92620 1227 aaKnown RBP13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 CUL5Q93034 780 aa13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 TCEANC2Q96MN5 208 aa13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 NEK1Q96PY6 1258 aa13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 MLXIPQ9HAP2 919 aa13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 RTEL1Q9NZ71 1219 aa13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 MSRAQ9UJ68 235 aa13.71□□□□□ -0.21
TRAPPC6B-204ENST00000554018 BDP1A6H8Y1 2624 aa13.71□□□□□ -0.22
TRAPPC6B-204ENST00000554018 HAS3O00219 553 aa13.7□□□□□ -0.22
TRAPPC6B-204ENST00000554018 PIK3CDO00329 1044 aa13.7□□□□□ -0.22
TRAPPC6B-204ENST00000554018 DLL1O00548 723 aa13.7□□□□□ -0.22
TRAPPC6B-204ENST00000554018 PFKMP08237 780 aa13.7□□□□□ -0.22
TRAPPC6B-204ENST00000554018 EXOSC10Q01780 885 aaKnown RBP13.7□□□□□ -0.22
TRAPPC6B-204ENST00000554018 SEMA3FQ13275 785 aa13.7□□□□□ -0.22
TRAPPC6B-204ENST00000554018 RAB30Q15771 203 aa13.7□□□□□ -0.22
TRAPPC6B-204ENST00000554018 ADCK5Q3MIX3 580 aa13.7□□□□□ -0.22
TRAPPC6B-204ENST00000554018 GNPTABQ3T906 1256 aa13.7□□□□□ -0.22
TRAPPC6B-204ENST00000554018 TMTC3Q6ZXV5 915 aa13.7□□□□□ -0.22
TRAPPC6B-204ENST00000554018 MICU3Q86XE3 530 aa13.7□□□□□ -0.22
TRAPPC6B-204ENST00000554018 KATNAL1Q9BW62 490 aa13.7□□□□□ -0.22
TRAPPC6B-204ENST00000554018 FTOQ9C0B1 505 aaKnown RBP eCLIP13.7□□□□□ -0.22
TRAPPC6B-204ENST00000554018 NKX2-4Q9H2Z4 354 aa13.7□□□□□ -0.22
TRAPPC6B-204ENST00000554018 PSTPIP2Q9H939 334 aa13.7□□□□□ -0.22
TRAPPC6B-204ENST00000554018 GTF2IRD1Q9UHL9 959 aa13.7□□□□□ -0.22
TRAPPC6B-204ENST00000554018 YBX2Q9Y2T7 364 aaKnown RBP13.7□□□□□ -0.22
TRAPPC6B-204ENST00000554018 SPATA31C2B4DYI2 1134 aa13.69□□□□□ -0.22
TRAPPC6B-204ENST00000554018 RBAK-RBAKDNI3L0D1 243 aa13.69□□□□□ -0.22
TRAPPC6B-204ENST00000554018 STAM2O75886 525 aa13.69□□□□□ -0.22
TRAPPC6B-204ENST00000554018 MYOGP15173 224 aa13.69□□□□□ -0.22
TRAPPC6B-204ENST00000554018 ICAM3P32942 547 aa13.69□□□□□ -0.22
TRAPPC6B-204ENST00000554018 ZNF200P98182 395 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC6B-204ENST00000554018 TSGA10IPQ3SY00 556 aa13.69□□□□□ -0.22
TRAPPC6B-204ENST00000554018 SYNE3Q6ZMZ3 975 aa13.69□□□□□ -0.22
TRAPPC6B-204ENST00000554018 CYFIP1Q7L576 1253 aa13.69□□□□□ -0.22
TRAPPC6B-204ENST00000554018 DHX32Q7L7V1 743 aaKnown RBP13.69□□□□□ -0.22
TRAPPC6B-204ENST00000554018 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.69□□□□□ -0.22
TRAPPC6B-204ENST00000554018 CCDC155Q8N6L0 562 aa13.69□□□□□ -0.22
TRAPPC6B-204ENST00000554018 CAGE1Q8TC20 777 aa13.69□□□□□ -0.22
TRAPPC6B-204ENST00000554018 AFAP1L1Q8TED9 768 aa13.69□□□□□ -0.22
TRAPPC6B-204ENST00000554018 CCDC136Q96JN2 1154 aa13.69□□□□□ -0.22
TRAPPC6B-204ENST00000554018 INPP4AQ96PE3 977 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC6B-204ENST00000554018 C16orf70Q9BSU1 422 aa13.69□□□□□ -0.22
TRAPPC6B-204ENST00000554018 BRPF3Q9ULD4 1205 aa13.69□□□□□ -0.22
TRAPPC6B-204ENST00000554018 PRRC2BQ5JSZ5 2229 aaKnown RBP13.69□□□□□ -0.22
TRAPPC6B-204ENST00000554018 ACTN1P12814 892 aa13.68□□□□□ -0.22
TRAPPC6B-204ENST00000554018 SELPP16109 830 aa13.68□□□□□ -0.22
TRAPPC6B-204ENST00000554018 ATP2A2P16615 1042 aaKnown RBP13.68□□□□□ -0.22
TRAPPC6B-204ENST00000554018 HIC1Q14526 733 aa13.68□□□□□ -0.22
TRAPPC6B-204ENST00000554018 GPNMBQ14956 572 aa13.68□□□□□ -0.22
TRAPPC6B-204ENST00000554018 UBE2SQ16763 222 aa13.68□□□□□ -0.22
TRAPPC6B-204ENST00000554018 PCNX4Q63HM2 1172 aa13.68□□□□□ -0.22
TRAPPC6B-204ENST00000554018 APOA5Q6Q788 366 aa13.68□□□□□ -0.22
TRAPPC6B-204ENST00000554018 HEATR3Q7Z4Q2 680 aa13.68□□□□□ -0.22
TRAPPC6B-204ENST00000554018 WNT8BQ93098 351 aa13.68□□□□□ -0.22
TRAPPC6B-204ENST00000554018 PRDM12Q9H4Q4 367 aa13.68□□□□□ -0.22
TRAPPC6B-204ENST00000554018 TELO2Q9Y4R8 837 aa13.68□□□□□ -0.22
TRAPPC6B-204ENST00000554018 XIRP2A4UGR9 3374 aa13.68□□□□□ -0.22
TRAPPC6B-204ENST00000554018 NOP56O00567 594 aaKnown RBP13.67□□□□□ -0.22
TRAPPC6B-204ENST00000554018 FIBPO43427 364 aa13.67□□□□□ -0.22
TRAPPC6B-204ENST00000554018 LGALS2P05162 132 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms