RNA–Protein interactions for RNA: ENST00000547951.1

USP44-204, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-204ENST00000547951 SESTD1Q86VW0 696 aa24.76■■□□□ 1.55
USP44-204ENST00000547951 RRP36Q96EU6 259 aaKnown RBP24.76■■□□□ 1.55
USP44-204ENST00000547951 TMEM87BQ96K49 555 aa24.76■■□□□ 1.55
USP44-204ENST00000547951 CCDC69A6NI79 296 aa24.75■■□□□ 1.55
USP44-204ENST00000547951 PITPNM1O00562 1244 aa24.75■■□□□ 1.55
USP44-204ENST00000547951 F2P00734 622 aa24.75■■□□□ 1.55
USP44-204ENST00000547951 HOXD8P13378 290 aaPredicted RBP24.75■■□□□ 1.55
USP44-204ENST00000547951 KIF5BP33176 963 aa24.75■■□□□ 1.55
USP44-204ENST00000547951 ZNF200P98182 395 aaPredicted RBP24.75■■□□□ 1.55
USP44-204ENST00000547951 TRAF1Q13077 416 aa24.75■■□□□ 1.55
USP44-204ENST00000547951 SEMA3FQ13275 785 aa24.75■■□□□ 1.55
USP44-204ENST00000547951 MFSD10Q14728 455 aa24.75■■□□□ 1.55
USP44-204ENST00000547951 USP38Q8NB14 1042 aa24.75■■□□□ 1.55
USP44-204ENST00000547951 SPATA33Q96N06 139 aa24.75■■□□□ 1.55
USP44-204ENST00000547951 MTA3Q9BTC8 594 aa24.75■■□□□ 1.55
USP44-204ENST00000547951 MTIF3Q9H2K0 278 aaKnown RBP24.75■■□□□ 1.55
USP44-204ENST00000547951 PRDM12Q9H4Q4 367 aa24.75■■□□□ 1.55
USP44-204ENST00000547951 TELO2Q9Y4R8 837 aa24.75■■□□□ 1.55
USP44-204ENST00000547951 SLC4A7Q9Y6M7 1214 aa24.75■■□□□ 1.55
USP44-204ENST00000547951 HAS3O00219 553 aa24.74■■□□□ 1.55
USP44-204ENST00000547951 GPNMBQ14956 572 aa24.74■■□□□ 1.55
USP44-204ENST00000547951 KIAA0753Q2KHM9 967 aa24.74■■□□□ 1.55
USP44-204ENST00000547951 RETREG2Q8NC44 543 aa24.74■■□□□ 1.55
USP44-204ENST00000547951 WNT8BQ93098 351 aa24.74■■□□□ 1.55
USP44-204ENST00000547951 TCEANC2Q96MN5 208 aa24.74■■□□□ 1.55
USP44-204ENST00000547951 RTEL1Q9NZ71 1219 aa24.74■■□□□ 1.55
USP44-204ENST00000547951 GTF2IRD1Q9UHL9 959 aa24.74■■□□□ 1.55
USP44-204ENST00000547951 PTPRSQ13332 1948 aa24.74■■□□□ 1.55
USP44-204ENST00000547951 MEIS2O14770 477 aa24.73■■□□□ 1.55
USP44-204ENST00000547951 LIFRP42702 1097 aa24.73■■□□□ 1.55
USP44-204ENST00000547951 RAB30Q15771 203 aa24.73■■□□□ 1.55
USP44-204ENST00000547951 RASEFQ8IZ41 740 aa24.73■■□□□ 1.55
USP44-204ENST00000547951 CCDC82Q8N4S0 544 aa24.73■■□□□ 1.55
USP44-204ENST00000547951 C7orf31Q8N865 590 aa24.73■■□□□ 1.55
USP44-204ENST00000547951 MSRAQ9UJ68 235 aa24.73■■□□□ 1.55
USP44-204ENST00000547951 ATP2A2P16615 1042 aaKnown RBP24.72■■□□□ 1.55
USP44-204ENST00000547951 BFSP2Q13515 415 aa24.72■■□□□ 1.55
USP44-204ENST00000547951 KCNV1Q6PIU1 500 aa24.72■■□□□ 1.55
USP44-204ENST00000547951 TMTC2Q8N394 836 aa24.72■■□□□ 1.55
USP44-204ENST00000547951 PPFIA4O75335 1185 aa24.71■■□□□ 1.55
USP44-204ENST00000547951 PFKMP08237 780 aa24.71■■□□□ 1.55
USP44-204ENST00000547951 SMARCA1P28370 1054 aa24.71■■□□□ 1.55
USP44-204ENST00000547951 RFC2P35250 354 aa24.71■■□□□ 1.55
USP44-204ENST00000547951 ADGRE1Q14246 886 aa24.71■■□□□ 1.55
USP44-204ENST00000547951 TCTN1Q2MV58 587 aa24.71■■□□□ 1.55
USP44-204ENST00000547951 ADCK5Q3MIX3 580 aa24.71■■□□□ 1.55
USP44-204ENST00000547951 MICU3Q86XE3 530 aa24.71■■□□□ 1.55
USP44-204ENST00000547951 INPP4AQ96PE3 977 aaPredicted RBP24.71■■□□□ 1.55
USP44-204ENST00000547951 LZTS2Q9BRK4 669 aa24.71■■□□□ 1.55
USP44-204ENST00000547951 C16orf70Q9BSU1 422 aa24.71■■□□□ 1.55
USP44-204ENST00000547951 FTOQ9C0B1 505 aaKnown RBP eCLIP24.71■■□□□ 1.55
USP44-204ENST00000547951 SEC63Q9UGP8 760 aaKnown RBP24.71■■□□□ 1.55
USP44-204ENST00000547951 SLC12A7Q9Y666 1083 aa24.71■■□□□ 1.55
USP44-204ENST00000547951 TGFB3P10600 412 aa24.7■■□□□ 1.54
USP44-204ENST00000547951 TMTC3Q6ZXV5 915 aa24.7■■□□□ 1.54
USP44-204ENST00000547951 SMARCC2Q8TAQ2 1214 aa24.7■■□□□ 1.54
USP44-204ENST00000547951 MLXIPQ9HAP2 919 aa24.7■■□□□ 1.54
USP44-204ENST00000547951 SPATA31C2B4DYI2 1134 aa24.69■■□□□ 1.54
USP44-204ENST00000547951 PIK3CDO00329 1044 aa24.69■■□□□ 1.54
USP44-204ENST00000547951 ICAM3P32942 547 aa24.69■■□□□ 1.54
USP44-204ENST00000547951 GNAQP50148 359 aa24.69■■□□□ 1.54
USP44-204ENST00000547951 UBE2SQ16763 222 aa24.69■■□□□ 1.54
USP44-204ENST00000547951 TRIM71Q2Q1W2 868 aaKnown RBP24.69■■□□□ 1.54
USP44-204ENST00000547951 TRAF7Q6Q0C0 670 aa24.69■■□□□ 1.54
USP44-204ENST00000547951 LRRC8DQ7L1W4 858 aa24.69■■□□□ 1.54
USP44-204ENST00000547951 SGMS1Q86VZ5 419 aa24.69■■□□□ 1.54
USP44-204ENST00000547951 FANCBQ8NB91 859 aa24.69■■□□□ 1.54
USP44-204ENST00000547951 CAGE1Q8TC20 777 aa24.69■■□□□ 1.54
USP44-204ENST00000547951 AFAP1L1Q8TED9 768 aa24.69■■□□□ 1.54
USP44-204ENST00000547951 KATNAL1Q9BW62 490 aa24.69■■□□□ 1.54
USP44-204ENST00000547951 BRPF3Q9ULD4 1205 aa24.69■■□□□ 1.54
USP44-204ENST00000547951 TRANK1O15050 2925 aa24.69■■□□□ 1.54
USP44-204ENST00000547951 SPTBN5Q9NRC6 3674 aaKnown RBP24.69■■□□□ 1.54
USP44-204ENST00000547951 REV3LO60673 3130 aa24.68■■□□□ 1.54
USP44-204ENST00000547951 CKBP12277 381 aa24.68■■□□□ 1.54
USP44-204ENST00000547951 SELPP16109 830 aa24.68■■□□□ 1.54
USP44-204ENST00000547951 EXOSC10Q01780 885 aaKnown RBP24.68■■□□□ 1.54
USP44-204ENST00000547951 CYFIP1Q7L576 1253 aa24.68■■□□□ 1.54
USP44-204ENST00000547951 NEK1Q96PY6 1258 aa24.68■■□□□ 1.54
USP44-204ENST00000547951 COL25A1Q9BXS0 654 aaPredicted RBP24.68■■□□□ 1.54
USP44-204ENST00000547951 SLC28A3Q9HAS3 691 aa24.68■■□□□ 1.54
USP44-204ENST00000547951 NBNO60934 754 aa24.67■■□□□ 1.54
USP44-204ENST00000547951 CDC45O75419 566 aa24.67■■□□□ 1.54
USP44-204ENST00000547951 ARHGEF15O94989 841 aa24.67■■□□□ 1.54
USP44-204ENST00000547951 LGALS2P05162 132 aa24.67■■□□□ 1.54
USP44-204ENST00000547951 CALM1P0DP23 149 aa24.67■■□□□ 1.54
USP44-204ENST00000547951 CALM2P0DP24 149 aa24.67■■□□□ 1.54
USP44-204ENST00000547951 CALM3P0DP25 149 aa24.67■■□□□ 1.54
USP44-204ENST00000547951 RBL2Q08999 1139 aa24.67■■□□□ 1.54
USP44-204ENST00000547951 GNPTABQ3T906 1256 aa24.67■■□□□ 1.54
USP44-204ENST00000547951 PCNX4Q63HM2 1172 aa24.67■■□□□ 1.54
USP44-204ENST00000547951 APOA5Q6Q788 366 aa24.67■■□□□ 1.54
USP44-204ENST00000547951 TMCO2Q7Z6W1 182 aaPredicted RBP24.67■■□□□ 1.54
USP44-204ENST00000547951 TRIM50Q86XT4 487 aa24.67■■□□□ 1.54
USP44-204ENST00000547951 CCDC155Q8N6L0 562 aa24.67■■□□□ 1.54
USP44-204ENST00000547951 CUL5Q93034 780 aa24.67■■□□□ 1.54
USP44-204ENST00000547951 PSTPIP2Q9H939 334 aa24.67■■□□□ 1.54
USP44-204ENST00000547951 PRDM6Q9NQX0 595 aa24.67■■□□□ 1.54
USP44-204ENST00000547951 PCDHA11Q9Y5I1 949 aa24.67■■□□□ 1.54
USP44-204ENST00000547951 FIBPO43427 364 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms