RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 NME2P22392 152 aa3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 ARHGAP4P98171 946 aa3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 TAF7Q15545 349 aaPredicted RBP3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 ZC3H12AQ5D1E8 599 aaKnown RBP3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 TMEM67Q5HYA8 995 aa3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 LCE4AQ5TA78 99 aa3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 PRR23BQ6ZRT6 265 aa3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 CYFIP1Q7L576 1253 aa3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 ARMC9Q7Z3E5 817 aa3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 LRP10Q7Z4F1 713 aa3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 PDZD3Q86UT5 571 aa3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 DMRTB1Q96MA1 342 aa3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 FAM161BQ96MY7 647 aa3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 BCO2Q9BYV7 579 aa3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 MTMR10Q9NXD2 777 aa3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 ZMYND8Q9ULU4 1186 aaPredicted RBP3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 TPX2Q9ULW0 747 aaKnown RBP3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 CTNND2Q9UQB3 1225 aa3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 STXBP5LQ9Y2K9 1186 aa3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 KNSTRNQ9Y448 316 aa3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 RIC1Q4ADV7 1423 aa3.93□□□□□ -1.78
CHMP4A-208ENST00000534106 USP2O75604 605 aaPredicted RBP3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 UFL1O94874 794 aa3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 HSPA5P11021 654 aaKnown RBP3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 SYN1P17600 705 aa3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 CFPP27918 469 aa3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 EIF4A1P60842 406 aaKnown RBP3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 RPS8P62241 208 aaKnown RBP3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 PDE4CQ08493 712 aa3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 PARP10Q53GL7 1025 aa3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 NBPF12Q5TAG4 269 aaPredicted RBP3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 CDKAL1Q5VV42 579 aa3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 COPS6Q7L5N1 327 aa3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 UBE2Q1Q7Z7E8 422 aa3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 C12orf40Q86WS4 652 aa3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 SPACA3Q8IXA5 215 aa3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 LRRC56Q8IYG6 542 aaPredicted RBP3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 FAM43AQ8N2R8 423 aa3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 KCT2Q8NC54 265 aa3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 AGBL3Q8NEM8 1001 aa3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 STK35Q8TDR2 534 aa3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 XAGE3Q8WTP9 111 aa3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 BRI3BPQ8WY22 251 aa3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 RTF1Q92541 710 aaKnown RBP3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 ELMO3Q96BJ8 720 aa3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 DIRC2Q96SL1 478 aa3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 EYA3Q99504 573 aa3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 FOXQ1Q9C009 403 aa3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 CARS2Q9HA77 564 aaKnown RBP3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 PRDM5Q9NQX1 630 aaPredicted RBP3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 MUC3AQ02505 3323 aa3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 POLR2AP24928 1970 aaKnown RBP3.92□□□□□ -1.78
CHMP4A-208ENST00000534106 BCORQ6W2J9 1755 aa3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 SCN7AQ01118 1682 aa3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 KIF20BQ96Q89 1820 aa3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 TMEM253P0C7T8 217 aa3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 ZSCAN22P10073 491 aaPredicted RBP3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 CCL5P13501 91 aa3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 NF2P35240 595 aa3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 CLCN7P51798 805 aa3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 INHBEP58166 350 aa3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 SF3B3Q15393 1217 aaKnown RBP3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 ECM1Q16610 540 aa3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 NKPD1Q17RQ9 610 aa3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 DACT2Q5SW24 774 aa3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 FYB2Q5VWT5 728 aa3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 NXPE4Q6UWF7 544 aa3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 PI16Q6UXB8 463 aa3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 KIAA0825Q8IV33 1275 aa3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 DIS3LQ8TF46 1054 aaKnown RBP3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 GUCD1Q96NT3 240 aa3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 GDF15Q99988 308 aa3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 DEFB129Q9H1M3 183 aa3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 LMCD1Q9NZU5 365 aa3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 PCDHA4Q9UN74 947 aa3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 USTQ9Y2C2 406 aa3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 NR2E3Q9Y5X4 410 aa3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 PAPPA2Q9BXP8 1791 aa3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 SH3TC1Q8TE82 1336 aa3.91□□□□□ -1.78
CHMP4A-208ENST00000534106 COL4A1P02462 1669 aa3.9□□□□□ -1.78
CHMP4A-208ENST00000534106 ANKRD26Q9UPS8 1709 aa3.9□□□□□ -1.78
CHMP4A-208ENST00000534106 DUOX1Q9NRD9 1551 aa3.9□□□□□ -1.78
CHMP4A-208ENST00000534106 ZNF609O15014 1411 aa3.9□□□□□ -1.78
CHMP4A-208ENST00000534106 CCL15-CCL14A0A0B4J2E2 113 aa3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 CLRN2A0PK11 232 aa3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 F8W031 263 aaPredicted RBP3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 TSPAN15O95858 294 aa3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 TFRCP02786 760 aaKnown RBP3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 C1QTNF9P0C862 333 aa3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 U2AF1L5P0DN76 240 aaPredicted RBP3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 PDIA4P13667 645 aaKnown RBP3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 KLRK1P26718 216 aa3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 GJA8P48165 433 aa3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 U2AF1Q01081 240 aaKnown RBP eCLIP3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 LRRC14Q15048 493 aa3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 TAF1CQ15572 869 aaPredicted RBP3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 CCL15Q16663 113 aa3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 KRT24Q2M2I5 525 aa3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 OTUD7BQ6GQQ9 843 aa3.9□□□□□ -1.79
CHMP4A-208ENST00000534106 LILRA6Q6PI73 481 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms