RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 NFXL1Q6ZNB6 911 aa17.69■□□□□ 0.42
COL1A1-213ENST00000511732 TMTC2Q8N394 836 aa17.69■□□□□ 0.42
COL1A1-213ENST00000511732 DHX38Q92620 1227 aaKnown RBP17.69■□□□□ 0.42
COL1A1-213ENST00000511732 RRP36Q96EU6 259 aaKnown RBP17.69■□□□□ 0.42
COL1A1-213ENST00000511732 ALG1Q9BT22 464 aa17.69■□□□□ 0.42
COL1A1-213ENST00000511732 NKX2-4Q9H2Z4 354 aa17.69■□□□□ 0.42
COL1A1-213ENST00000511732 GTF2IRD1Q9UHL9 959 aa17.69■□□□□ 0.42
COL1A1-213ENST00000511732 NOD1Q9Y239 953 aa17.69■□□□□ 0.42
COL1A1-213ENST00000511732 SLC4A7Q9Y6M7 1214 aa17.69■□□□□ 0.42
COL1A1-213ENST00000511732 ZBBXA8MT70 800 aa17.68■□□□□ 0.42
COL1A1-213ENST00000511732 MEIS2O14770 477 aa17.68■□□□□ 0.42
COL1A1-213ENST00000511732 PFKMP08237 780 aa17.68■□□□□ 0.42
COL1A1-213ENST00000511732 TGFB3P10600 412 aa17.68■□□□□ 0.42
COL1A1-213ENST00000511732 MYOGP15173 224 aa17.68■□□□□ 0.42
COL1A1-213ENST00000511732 RFC2P35250 354 aa17.68■□□□□ 0.42
COL1A1-213ENST00000511732 SEMA3FQ13275 785 aa17.68■□□□□ 0.42
COL1A1-213ENST00000511732 BFSP2Q13515 415 aa17.68■□□□□ 0.42
COL1A1-213ENST00000511732 MFSD10Q14728 455 aa17.68■□□□□ 0.42
COL1A1-213ENST00000511732 RAB30Q15771 203 aa17.68■□□□□ 0.42
COL1A1-213ENST00000511732 KIAA0753Q2KHM9 967 aa17.68■□□□□ 0.42
COL1A1-213ENST00000511732 RETREG2Q8NC44 543 aa17.68■□□□□ 0.42
COL1A1-213ENST00000511732 SPATA33Q96N06 139 aa17.68■□□□□ 0.42
COL1A1-213ENST00000511732 LZTS2Q9BRK4 669 aa17.68■□□□□ 0.42
COL1A1-213ENST00000511732 RTEL1Q9NZ71 1219 aa17.68■□□□□ 0.42
COL1A1-213ENST00000511732 MSRAQ9UJ68 235 aa17.68■□□□□ 0.42
COL1A1-213ENST00000511732 PTPRSQ13332 1948 aa17.67■□□□□ 0.42
COL1A1-213ENST00000511732 hCG_1642624A0A1W2PR95 340 aa17.67■□□□□ 0.42
COL1A1-213ENST00000511732 PPFIA4O75335 1185 aa17.67■□□□□ 0.42
COL1A1-213ENST00000511732 ZNF200P98182 395 aaPredicted RBP17.67■□□□□ 0.42
COL1A1-213ENST00000511732 C7orf31Q8N865 590 aa17.67■□□□□ 0.42
COL1A1-213ENST00000511732 WNT8BQ93098 351 aa17.67■□□□□ 0.42
COL1A1-213ENST00000511732 INPP4AQ96PE3 977 aaPredicted RBP17.67■□□□□ 0.42
COL1A1-213ENST00000511732 C16orf70Q9BSU1 422 aa17.67■□□□□ 0.42
COL1A1-213ENST00000511732 KATNAL1Q9BW62 490 aa17.67■□□□□ 0.42
COL1A1-213ENST00000511732 PRDM12Q9H4Q4 367 aa17.67■□□□□ 0.42
COL1A1-213ENST00000511732 TELO2Q9Y4R8 837 aa17.67■□□□□ 0.42
COL1A1-213ENST00000511732 PIK3CDO00329 1044 aa17.66■□□□□ 0.42
COL1A1-213ENST00000511732 ICAM3P32942 547 aa17.66■□□□□ 0.42
COL1A1-213ENST00000511732 GNAQP50148 359 aa17.66■□□□□ 0.42
COL1A1-213ENST00000511732 SGMS1Q86VZ5 419 aa17.66■□□□□ 0.42
COL1A1-213ENST00000511732 RASEFQ8IZ41 740 aa17.66■□□□□ 0.42
COL1A1-213ENST00000511732 CCDC82Q8N4S0 544 aa17.66■□□□□ 0.42
COL1A1-213ENST00000511732 USP38Q8NB14 1042 aa17.66■□□□□ 0.42
COL1A1-213ENST00000511732 FANCBQ8NB91 859 aa17.66■□□□□ 0.42
COL1A1-213ENST00000511732 SMARCC2Q8TAQ2 1214 aa17.66■□□□□ 0.42
COL1A1-213ENST00000511732 CAGE1Q8TC20 777 aa17.66■□□□□ 0.42
COL1A1-213ENST00000511732 TCEANC2Q96MN5 208 aa17.66■□□□□ 0.42
COL1A1-213ENST00000511732 MLXIPQ9HAP2 919 aa17.66■□□□□ 0.42
COL1A1-213ENST00000511732 SEC63Q9UGP8 760 aaKnown RBP17.66■□□□□ 0.42
COL1A1-213ENST00000511732 SLC12A7Q9Y666 1083 aa17.66■□□□□ 0.42
COL1A1-213ENST00000511732 SPATA31C2B4DYI2 1134 aa17.65■□□□□ 0.42
COL1A1-213ENST00000511732 CALM1P0DP23 149 aa17.65■□□□□ 0.42
COL1A1-213ENST00000511732 CALM2P0DP24 149 aa17.65■□□□□ 0.42
COL1A1-213ENST00000511732 CALM3P0DP25 149 aa17.65■□□□□ 0.42
COL1A1-213ENST00000511732 CKBP12277 381 aa17.65■□□□□ 0.42
COL1A1-213ENST00000511732 ATP2A2P16615 1042 aaKnown RBP17.65■□□□□ 0.42
COL1A1-213ENST00000511732 EXOSC10Q01780 885 aaKnown RBP17.65■□□□□ 0.42
COL1A1-213ENST00000511732 RBL2Q08999 1139 aa17.65■□□□□ 0.42
COL1A1-213ENST00000511732 ADGRE1Q14246 886 aa17.65■□□□□ 0.42
COL1A1-213ENST00000511732 ADCK5Q3MIX3 580 aa17.65■□□□□ 0.42
COL1A1-213ENST00000511732 TMTC3Q6ZXV5 915 aa17.65■□□□□ 0.42
COL1A1-213ENST00000511732 AFAP1L1Q8TED9 768 aa17.65■□□□□ 0.42
COL1A1-213ENST00000511732 NEK1Q96PY6 1258 aa17.65■□□□□ 0.42
COL1A1-213ENST00000511732 COL25A1Q9BXS0 654 aaPredicted RBP17.65■□□□□ 0.42
COL1A1-213ENST00000511732 SLC28A3Q9HAS3 691 aa17.65■□□□□ 0.42
COL1A1-213ENST00000511732 STAM2O75886 525 aa17.64■□□□□ 0.41
COL1A1-213ENST00000511732 ACTN1P12814 892 aa17.64■□□□□ 0.41
COL1A1-213ENST00000511732 SELPP16109 830 aa17.64■□□□□ 0.41
COL1A1-213ENST00000511732 TCTN1Q2MV58 587 aa17.64■□□□□ 0.41
COL1A1-213ENST00000511732 TRIM71Q2Q1W2 868 aaKnown RBP17.64■□□□□ 0.41
COL1A1-213ENST00000511732 GNPTABQ3T906 1256 aa17.64■□□□□ 0.41
COL1A1-213ENST00000511732 PCNX4Q63HM2 1172 aa17.64■□□□□ 0.41
COL1A1-213ENST00000511732 TRAF7Q6Q0C0 670 aa17.64■□□□□ 0.41
COL1A1-213ENST00000511732 LRRC8DQ7L1W4 858 aa17.64■□□□□ 0.41
COL1A1-213ENST00000511732 MICU3Q86XE3 530 aa17.64■□□□□ 0.41
COL1A1-213ENST00000511732 CCDC155Q8N6L0 562 aa17.64■□□□□ 0.41
COL1A1-213ENST00000511732 CUL5Q93034 780 aa17.64■□□□□ 0.41
COL1A1-213ENST00000511732 FTOQ9C0B1 505 aaKnown RBP eCLIP17.64■□□□□ 0.41
COL1A1-213ENST00000511732 BRPF3Q9ULD4 1205 aa17.64■□□□□ 0.41
COL1A1-213ENST00000511732 PCDHA11Q9Y5I1 949 aa17.64■□□□□ 0.41
COL1A1-213ENST00000511732 FIBPO43427 364 aa17.63■□□□□ 0.41
COL1A1-213ENST00000511732 NBNO60934 754 aa17.63■□□□□ 0.41
COL1A1-213ENST00000511732 LGALS2P05162 132 aa17.63■□□□□ 0.41
COL1A1-213ENST00000511732 PTK7Q13308 1070 aa17.63■□□□□ 0.41
COL1A1-213ENST00000511732 TSGA10IPQ3SY00 556 aa17.63■□□□□ 0.41
COL1A1-213ENST00000511732 RNF20Q5VTR2 975 aa17.63■□□□□ 0.41
COL1A1-213ENST00000511732 CYFIP1Q7L576 1253 aa17.63■□□□□ 0.41
COL1A1-213ENST00000511732 PSTPIP2Q9H939 334 aa17.63■□□□□ 0.41
COL1A1-213ENST00000511732 A0A0C4DFX4 3053 aa17.63■□□□□ 0.41
COL1A1-213ENST00000511732 H3BRB1 525 aa17.62■□□□□ 0.41
COL1A1-213ENST00000511732 CDC45O75419 566 aa17.62■□□□□ 0.41
COL1A1-213ENST00000511732 NEDD9Q14511 834 aa17.62■□□□□ 0.41
COL1A1-213ENST00000511732 UBE2SQ16763 222 aa17.62■□□□□ 0.41
COL1A1-213ENST00000511732 ZNF618Q5T7W0 954 aa17.62■□□□□ 0.41
COL1A1-213ENST00000511732 PPP2R2DQ66LE6 453 aa17.62■□□□□ 0.41
COL1A1-213ENST00000511732 APOA5Q6Q788 366 aa17.62■□□□□ 0.41
COL1A1-213ENST00000511732 METTL7BQ6UX53 244 aa17.62■□□□□ 0.41
COL1A1-213ENST00000511732 SLC9A7Q96T83 725 aa17.62■□□□□ 0.41
COL1A1-213ENST00000511732 GAS2L1Q99501 681 aaPredicted RBP17.62■□□□□ 0.41
COL1A1-213ENST00000511732 GPR20Q99678 358 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms