RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 XIRP2A4UGR9 3374 aa18.45■□□□□ 0.54
ERGIC3-217ENST00000488935 CKBP12277 381 aa18.45■□□□□ 0.54
ERGIC3-217ENST00000488935 SELPP16109 830 aa18.45■□□□□ 0.54
ERGIC3-217ENST00000488935 RFC2P35250 354 aa18.45■□□□□ 0.54
ERGIC3-217ENST00000488935 TRDNQ13061 729 aa18.45■□□□□ 0.54
ERGIC3-217ENST00000488935 LAMC2Q13753 1193 aa18.45■□□□□ 0.54
ERGIC3-217ENST00000488935 MYSM1Q5VVJ2 828 aa18.45■□□□□ 0.54
ERGIC3-217ENST00000488935 LRRC8DQ7L1W4 858 aa18.45■□□□□ 0.54
ERGIC3-217ENST00000488935 SPATA33Q96N06 139 aa18.45■□□□□ 0.54
ERGIC3-217ENST00000488935 RTEL1Q9NZ71 1219 aa18.45■□□□□ 0.54
ERGIC3-217ENST00000488935 UBA1P22314 1058 aaKnown RBP18.44■□□□□ 0.54
ERGIC3-217ENST00000488935 WDR5P61964 334 aaKnown RBP18.44■□□□□ 0.54
ERGIC3-217ENST00000488935 WTAPQ15007 396 aa18.44■□□□□ 0.54
ERGIC3-217ENST00000488935 CELF3Q5SZQ8 465 aaKnown RBP18.44■□□□□ 0.54
ERGIC3-217ENST00000488935 ZNF618Q5T7W0 954 aa18.44■□□□□ 0.54
ERGIC3-217ENST00000488935 VSIG10LQ86VR7 867 aa18.44■□□□□ 0.54
ERGIC3-217ENST00000488935 RAB11FIP4Q86YS3 637 aa18.44■□□□□ 0.54
ERGIC3-217ENST00000488935 PPTC7Q8NI37 304 aa18.44■□□□□ 0.54
ERGIC3-217ENST00000488935 ADAMTS19Q8TE59 1207 aa18.44■□□□□ 0.54
ERGIC3-217ENST00000488935 SLC9A7Q96T83 725 aa18.44■□□□□ 0.54
ERGIC3-217ENST00000488935 OSBPL7Q9BZF2 842 aa18.44■□□□□ 0.54
ERGIC3-217ENST00000488935 RIOX1Q9H6W3 641 aa18.44■□□□□ 0.54
ERGIC3-217ENST00000488935 MTUS1Q9ULD2 1270 aa18.44■□□□□ 0.54
ERGIC3-217ENST00000488935 MTCH2Q9Y6C9 303 aa18.44■□□□□ 0.54
ERGIC3-217ENST00000488935 GCOM1H8Y6P7 765 aaPredicted RBP18.43■□□□□ 0.54
ERGIC3-217ENST00000488935 HAS3O00219 553 aa18.43■□□□□ 0.54
ERGIC3-217ENST00000488935 TNFRSF10AO00220 468 aa18.43■□□□□ 0.54
ERGIC3-217ENST00000488935 TLL1O43897 1013 aa18.43■□□□□ 0.54
ERGIC3-217ENST00000488935 POLR2MP0CAP2 368 aa18.43■□□□□ 0.54
ERGIC3-217ENST00000488935 KCNJ6P48051 423 aa18.43■□□□□ 0.54
ERGIC3-217ENST00000488935 KCNQ1P51787 676 aa18.43■□□□□ 0.54
ERGIC3-217ENST00000488935 MRPS5P82675 430 aaKnown RBP18.43■□□□□ 0.54
ERGIC3-217ENST00000488935 TROAPQ12815 778 aa18.43■□□□□ 0.54
ERGIC3-217ENST00000488935 MBTPS1Q14703 1052 aa18.43■□□□□ 0.54
ERGIC3-217ENST00000488935 TRIM71Q2Q1W2 868 aaKnown RBP18.43■□□□□ 0.54
ERGIC3-217ENST00000488935 TRAF7Q6Q0C0 670 aa18.43■□□□□ 0.54
ERGIC3-217ENST00000488935 RALYLQ86SE5 291 aaKnown RBP18.43■□□□□ 0.54
ERGIC3-217ENST00000488935 SESTD1Q86VW0 696 aa18.43■□□□□ 0.54
ERGIC3-217ENST00000488935 SKAP1Q86WV1 359 aa18.43■□□□□ 0.54
ERGIC3-217ENST00000488935 CMTR1Q8N1G2 835 aaKnown RBP18.43■□□□□ 0.54
ERGIC3-217ENST00000488935 CAGE1Q8TC20 777 aa18.43■□□□□ 0.54
ERGIC3-217ENST00000488935 AFAP1L1Q8TED9 768 aa18.43■□□□□ 0.54
ERGIC3-217ENST00000488935 ATXN2LQ8WWM7 1075 aaKnown RBP18.43■□□□□ 0.54
ERGIC3-217ENST00000488935 RAPGEFL1Q9UHV5 662 aa18.43■□□□□ 0.54
ERGIC3-217ENST00000488935 U3KPZ7 1027 aaPredicted RBP18.43■□□□□ 0.54
ERGIC3-217ENST00000488935 F2P00734 622 aa18.42■□□□□ 0.54
ERGIC3-217ENST00000488935 NT5C2P49902 561 aa18.42■□□□□ 0.54
ERGIC3-217ENST00000488935 CCDC155Q8N6L0 562 aa18.42■□□□□ 0.54
ERGIC3-217ENST00000488935 NCOA7Q8NI08 942 aa18.42■□□□□ 0.54
ERGIC3-217ENST00000488935 IGDCC4Q8TDY8 1250 aa18.42■□□□□ 0.54
ERGIC3-217ENST00000488935 EMID1Q96A84 441 aaPredicted RBP18.42■□□□□ 0.54
ERGIC3-217ENST00000488935 ZBED2Q9BTP6 218 aa18.42■□□□□ 0.54
ERGIC3-217ENST00000488935 PNMA6FA0A0J9YX94 578 aa18.41■□□□□ 0.54
ERGIC3-217ENST00000488935 hCG_1642624A0A1W2PR95 340 aa18.41■□□□□ 0.54
ERGIC3-217ENST00000488935 ERICH2A1L162 156 aa18.41■□□□□ 0.54
ERGIC3-217ENST00000488935 SGSM2O43147 1006 aa18.41■□□□□ 0.54
ERGIC3-217ENST00000488935 RXRAP19793 462 aa18.41■□□□□ 0.54
ERGIC3-217ENST00000488935 CCND2P30279 289 aa18.41■□□□□ 0.54
ERGIC3-217ENST00000488935 MRPS9P82933 396 aaKnown RBP18.41■□□□□ 0.54
ERGIC3-217ENST00000488935 SP4Q02446 784 aa18.41■□□□□ 0.54
ERGIC3-217ENST00000488935 GHRHRQ02643 423 aa18.41■□□□□ 0.54
ERGIC3-217ENST00000488935 GRB10Q13322 594 aa18.41■□□□□ 0.54
ERGIC3-217ENST00000488935 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.41■□□□□ 0.543e-8■■■□□ 14.8
ERGIC3-217ENST00000488935 PHOSPHO2Q8TCD6 241 aa18.41■□□□□ 0.54
ERGIC3-217ENST00000488935 GDPD5Q8WTR4 605 aa18.41■□□□□ 0.54
ERGIC3-217ENST00000488935 RUFY2Q8WXA3 655 aa18.41■□□□□ 0.54
ERGIC3-217ENST00000488935 C16orf70Q9BSU1 422 aa18.41■□□□□ 0.54
ERGIC3-217ENST00000488935 MLXIPQ9HAP2 919 aa18.41■□□□□ 0.54
ERGIC3-217ENST00000488935 RBM8AQ9Y5S9 174 aaKnown RBP18.41■□□□□ 0.54
ERGIC3-217ENST00000488935 KIF28PB7ZC32 967 aa18.4■□□□□ 0.54
ERGIC3-217ENST00000488935 SEMA3FQ13275 785 aa18.4■□□□□ 0.54
ERGIC3-217ENST00000488935 CNKSR3Q6P9H4 555 aa18.4■□□□□ 0.54
ERGIC3-217ENST00000488935 USP17L6PQ6QN14 398 aa18.4■□□□□ 0.54
ERGIC3-217ENST00000488935 CYFIP1Q7L576 1253 aa18.4■□□□□ 0.54
ERGIC3-217ENST00000488935 MB21D2Q8IYB1 491 aaPredicted RBP18.4■□□□□ 0.54
ERGIC3-217ENST00000488935 UHRF1Q96T88 793 aaPredicted RBP18.4■□□□□ 0.54
ERGIC3-217ENST00000488935 MAF1Q9H063 256 aa18.4■□□□□ 0.54
ERGIC3-217ENST00000488935 COL4A4P53420 1690 aaPredicted RBP18.4■□□□□ 0.54
ERGIC3-217ENST00000488935 LPXNO60711 386 aa18.39■□□□□ 0.53
ERGIC3-217ENST00000488935 PPFIA4O75335 1185 aa18.39■□□□□ 0.53
ERGIC3-217ENST00000488935 PLEKHA8P1O95397 391 aa18.39■□□□□ 0.53
ERGIC3-217ENST00000488935 CXCL10P02778 98 aa18.39■□□□□ 0.53
ERGIC3-217ENST00000488935 THPOP40225 353 aa18.39■□□□□ 0.53
ERGIC3-217ENST00000488935 PTK7Q13308 1070 aa18.39■□□□□ 0.53
ERGIC3-217ENST00000488935 UTP14CQ5TAP6 766 aaKnown RBP18.39■□□□□ 0.53
ERGIC3-217ENST00000488935 CATIPQ7Z7H3 387 aa18.39■□□□□ 0.53
ERGIC3-217ENST00000488935 TRIM50Q86XT4 487 aa18.39■□□□□ 0.53
ERGIC3-217ENST00000488935 KATNAL1Q9BW62 490 aa18.39■□□□□ 0.53
ERGIC3-217ENST00000488935 LRRC2Q9BYS8 371 aa18.39■□□□□ 0.53
ERGIC3-217ENST00000488935 LY9Q9HBG7 655 aa18.39■□□□□ 0.53
ERGIC3-217ENST00000488935 TRANK1O15050 2925 aa18.39■□□□□ 0.53
ERGIC3-217ENST00000488935 TREHO43280 583 aa18.38■□□□□ 0.53
ERGIC3-217ENST00000488935 GTPBP6O43824 516 aaPredicted RBP18.38■□□□□ 0.53
ERGIC3-217ENST00000488935 BAIAP3O94812 1187 aa18.38■□□□□ 0.53
ERGIC3-217ENST00000488935 CTSHP09668 335 aa18.38■□□□□ 0.53
ERGIC3-217ENST00000488935 SMIM10L2AP0DMW4 78 aa18.38■□□□□ 0.53
ERGIC3-217ENST00000488935 SMIM10L2BP0DMW5 78 aa18.38■□□□□ 0.53
ERGIC3-217ENST00000488935 HOXD8P13378 290 aaPredicted RBP18.38■□□□□ 0.53
ERGIC3-217ENST00000488935 ZNF654Q8IZM8 581 aa18.38■□□□□ 0.53
ERGIC3-217ENST00000488935 DBF4BQ8NFT6 615 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms