RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 CELF3Q5SZQ8 465 aaKnown RBP13.05□□□□□ -0.32
NIPAL3-207ENST00000488155 MYSM1Q5VVJ2 828 aa13.05□□□□□ -0.32
NIPAL3-207ENST00000488155 MICU3Q86XE3 530 aa13.05□□□□□ -0.32
NIPAL3-207ENST00000488155 TMTC2Q8N394 836 aa13.05□□□□□ -0.32
NIPAL3-207ENST00000488155 SMARCC2Q8TAQ2 1214 aa13.05□□□□□ -0.32
NIPAL3-207ENST00000488155 SPATA33Q96N06 139 aa13.05□□□□□ -0.32
NIPAL3-207ENST00000488155 SPZ1Q9BXG8 430 aa13.05□□□□□ -0.32
NIPAL3-207ENST00000488155 FTOQ9C0B1 505 aaKnown RBP eCLIP13.05□□□□□ -0.32
NIPAL3-207ENST00000488155 MLXIPQ9HAP2 919 aa13.05□□□□□ -0.32
NIPAL3-207ENST00000488155 MSRAQ9UJ68 235 aa13.05□□□□□ -0.32
NIPAL3-207ENST00000488155 SLC12A7Q9Y666 1083 aa13.05□□□□□ -0.32
NIPAL3-207ENST00000488155 SLC4A7Q9Y6M7 1214 aa13.05□□□□□ -0.32
NIPAL3-207ENST00000488155 CUL9Q8IWT3 2517 aa13.04□□□□□ -0.32
NIPAL3-207ENST00000488155 TMEM265A0A087WTH1 108 aa13.04□□□□□ -0.32
NIPAL3-207ENST00000488155 IQCF3P0C7M6 154 aa13.04□□□□□ -0.32
NIPAL3-207ENST00000488155 UBA1P22314 1058 aaKnown RBP13.04□□□□□ -0.32
NIPAL3-207ENST00000488155 GNAQP50148 359 aa13.04□□□□□ -0.32
NIPAL3-207ENST00000488155 MRPS9P82933 396 aaKnown RBP13.04□□□□□ -0.32
NIPAL3-207ENST00000488155 ZNF200P98182 395 aaPredicted RBP13.04□□□□□ -0.32
NIPAL3-207ENST00000488155 BFSP2Q13515 415 aa13.04□□□□□ -0.32
NIPAL3-207ENST00000488155 MFSD10Q14728 455 aa13.04□□□□□ -0.32
NIPAL3-207ENST00000488155 KIAA0753Q2KHM9 967 aa13.04□□□□□ -0.32
NIPAL3-207ENST00000488155 SAMD3Q8N6K7 520 aa13.04□□□□□ -0.32
NIPAL3-207ENST00000488155 C7orf31Q8N865 590 aa13.04□□□□□ -0.32
NIPAL3-207ENST00000488155 PPTC7Q8NI37 304 aa13.04□□□□□ -0.32
NIPAL3-207ENST00000488155 PPM1EQ8WY54 764 aa13.04□□□□□ -0.32
NIPAL3-207ENST00000488155 CUL5Q93034 780 aa13.04□□□□□ -0.32
NIPAL3-207ENST00000488155 CTAGE1Q96RT6 745 aa13.04□□□□□ -0.32
NIPAL3-207ENST00000488155 MAP3K14Q99558 947 aa13.04□□□□□ -0.32
NIPAL3-207ENST00000488155 MTA3Q9BTC8 594 aa13.04□□□□□ -0.32
NIPAL3-207ENST00000488155 PRDM12Q9H4Q4 367 aa13.04□□□□□ -0.32
NIPAL3-207ENST00000488155 YBX2Q9Y2T7 364 aaKnown RBP13.04□□□□□ -0.32
NIPAL3-207ENST00000488155 CDC45O75419 566 aa13.03□□□□□ -0.32
NIPAL3-207ENST00000488155 CALM1P0DP23 149 aa13.03□□□□□ -0.32
NIPAL3-207ENST00000488155 CALM2P0DP24 149 aa13.03□□□□□ -0.32
NIPAL3-207ENST00000488155 CALM3P0DP25 149 aa13.03□□□□□ -0.32
NIPAL3-207ENST00000488155 LIFRP42702 1097 aa13.03□□□□□ -0.32
NIPAL3-207ENST00000488155 SP4Q02446 784 aa13.03□□□□□ -0.32
NIPAL3-207ENST00000488155 RNF20Q5VTR2 975 aa13.03□□□□□ -0.32
NIPAL3-207ENST00000488155 KCNV1Q6PIU1 500 aa13.03□□□□□ -0.32
NIPAL3-207ENST00000488155 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.03□□□□□ -0.32
NIPAL3-207ENST00000488155 RASEFQ8IZ41 740 aa13.03□□□□□ -0.32
NIPAL3-207ENST00000488155 FANCBQ8NB91 859 aa13.03□□□□□ -0.32
NIPAL3-207ENST00000488155 DHX38Q92620 1227 aaKnown RBP13.03□□□□□ -0.32
NIPAL3-207ENST00000488155 EMID1Q96A84 441 aaPredicted RBP13.03□□□□□ -0.32
NIPAL3-207ENST00000488155 NEK1Q96PY6 1258 aa13.03□□□□□ -0.32
NIPAL3-207ENST00000488155 LZTS2Q9BRK4 669 aa13.03□□□□□ -0.32
NIPAL3-207ENST00000488155 KATNAL1Q9BW62 490 aa13.03□□□□□ -0.32
NIPAL3-207ENST00000488155 GTF2IRD1Q9UHL9 959 aa13.03□□□□□ -0.32
NIPAL3-207ENST00000488155 TELO2Q9Y4R8 837 aa13.03□□□□□ -0.32
NIPAL3-207ENST00000488155 PITPNM1O00562 1244 aa13.02□□□□□ -0.33
NIPAL3-207ENST00000488155 MEIS2O14770 477 aa13.02□□□□□ -0.33
NIPAL3-207ENST00000488155 F2P00734 622 aa13.02□□□□□ -0.33
NIPAL3-207ENST00000488155 ACTN1P12814 892 aa13.02□□□□□ -0.33
NIPAL3-207ENST00000488155 CPA1P15085 419 aa13.02□□□□□ -0.33
NIPAL3-207ENST00000488155 ATP2A2P16615 1042 aaKnown RBP13.02□□□□□ -0.33
NIPAL3-207ENST00000488155 SMARCA1P28370 1054 aa13.02□□□□□ -0.33
NIPAL3-207ENST00000488155 SEMA3FQ13275 785 aa13.02□□□□□ -0.33
NIPAL3-207ENST00000488155 HIC1Q14526 733 aa13.02□□□□□ -0.33
NIPAL3-207ENST00000488155 RAB30Q15771 203 aa13.02□□□□□ -0.33
NIPAL3-207ENST00000488155 UBE2SQ16763 222 aa13.02□□□□□ -0.33
NIPAL3-207ENST00000488155 ADCK5Q3MIX3 580 aa13.02□□□□□ -0.33
NIPAL3-207ENST00000488155 SYNE3Q6ZMZ3 975 aa13.02□□□□□ -0.33
NIPAL3-207ENST00000488155 CYFIP1Q7L576 1253 aa13.02□□□□□ -0.33
NIPAL3-207ENST00000488155 SESTD1Q86VW0 696 aa13.02□□□□□ -0.33
NIPAL3-207ENST00000488155 CCDC136Q96JN2 1154 aa13.02□□□□□ -0.33
NIPAL3-207ENST00000488155 SLC28A3Q9HAS3 691 aa13.02□□□□□ -0.33
NIPAL3-207ENST00000488155 NAP1L2Q9ULW6 460 aaPredicted RBP13.02□□□□□ -0.33
NIPAL3-207ENST00000488155 MYO7AQ13402 2215 aa13.01□□□□□ -0.33
NIPAL3-207ENST00000488155 HAS3O00219 553 aa13.01□□□□□ -0.33
NIPAL3-207ENST00000488155 NOP56O00567 594 aaKnown RBP13.01□□□□□ -0.33
NIPAL3-207ENST00000488155 PPFIA4O75335 1185 aa13.01□□□□□ -0.33
NIPAL3-207ENST00000488155 PFKMP08237 780 aa13.01□□□□□ -0.33
NIPAL3-207ENST00000488155 TGFB3P10600 412 aa13.01□□□□□ -0.33
NIPAL3-207ENST00000488155 GNPTABQ3T906 1256 aa13.01□□□□□ -0.33
NIPAL3-207ENST00000488155 TMTC3Q6ZXV5 915 aa13.01□□□□□ -0.33
NIPAL3-207ENST00000488155 HEATR3Q7Z4Q2 680 aa13.01□□□□□ -0.33
NIPAL3-207ENST00000488155 CCDC155Q8N6L0 562 aa13.01□□□□□ -0.33
NIPAL3-207ENST00000488155 USP38Q8NB14 1042 aa13.01□□□□□ -0.33
NIPAL3-207ENST00000488155 CAGE1Q8TC20 777 aa13.01□□□□□ -0.33
NIPAL3-207ENST00000488155 WNT8BQ93098 351 aa13.01□□□□□ -0.33
NIPAL3-207ENST00000488155 GAS2L1Q99501 681 aaPredicted RBP13.01□□□□□ -0.33
NIPAL3-207ENST00000488155 C16orf70Q9BSU1 422 aa13.01□□□□□ -0.33
NIPAL3-207ENST00000488155 PSTPIP2Q9H939 334 aa13.01□□□□□ -0.33
NIPAL3-207ENST00000488155 PKD2L1Q9P0L9 805 aa13.01□□□□□ -0.33
NIPAL3-207ENST00000488155 BRPF3Q9ULD4 1205 aa13.01□□□□□ -0.33
NIPAL3-207ENST00000488155 FRMPD4Q14CM0 1322 aa13.01□□□□□ -0.33
NIPAL3-207ENST00000488155 BRWD1Q9NSI6 2320 aa13□□□□□ -0.33
NIPAL3-207ENST00000488155 LGALS2P05162 132 aa13□□□□□ -0.33
NIPAL3-207ENST00000488155 CKBP12277 381 aa13□□□□□ -0.33
NIPAL3-207ENST00000488155 SELPP16109 830 aa13□□□□□ -0.33
NIPAL3-207ENST00000488155 IGFBP4P22692 258 aa13□□□□□ -0.33
NIPAL3-207ENST00000488155 RFC2P35250 354 aa13□□□□□ -0.33
NIPAL3-207ENST00000488155 GPNMBQ14956 572 aa13□□□□□ -0.33
NIPAL3-207ENST00000488155 CCDC85BQ15834 202 aaPredicted RBP13□□□□□ -0.33
NIPAL3-207ENST00000488155 UTP14CQ5TAP6 766 aaKnown RBP13□□□□□ -0.33
NIPAL3-207ENST00000488155 PPP2R2DQ66LE6 453 aa13□□□□□ -0.33
NIPAL3-207ENST00000488155 APOA5Q6Q788 366 aa13□□□□□ -0.33
NIPAL3-207ENST00000488155 LRRC8DQ7L1W4 858 aa13□□□□□ -0.33
NIPAL3-207ENST00000488155 DHX32Q7L7V1 743 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms