RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 TM9SF2Q99805 663 aa6.72□□□□□ -1.33
VPS45-207ENST00000477558 TNKS2Q9H2K2 1166 aa6.72□□□□□ -1.33
VPS45-207ENST00000477558 SRP68Q9UHB9 627 aaKnown RBP6.72□□□□□ -1.33
VPS45-207ENST00000477558 STRIP2Q9ULQ0 834 aa6.72□□□□□ -1.33
VPS45-207ENST00000477558 RIC1Q4ADV7 1423 aa6.72□□□□□ -1.33
VPS45-207ENST00000477558 PXDNLA1KZ92 1463 aa6.71□□□□□ -1.33
VPS45-207ENST00000477558 IBTKQ9P2D0 1353 aaPredicted RBP6.71□□□□□ -1.33
VPS45-207ENST00000477558 A0A087WZG4 1122 aa6.71□□□□□ -1.34
VPS45-207ENST00000477558 GUCY2CP25092 1073 aa6.71□□□□□ -1.34
VPS45-207ENST00000477558 TM4SF1P30408 202 aa6.71□□□□□ -1.34
VPS45-207ENST00000477558 ETV3P41162 512 aa6.71□□□□□ -1.34
VPS45-207ENST00000477558 DDR1Q08345 913 aa6.71□□□□□ -1.34
VPS45-207ENST00000477558 PPP2R5EQ16537 467 aa6.71□□□□□ -1.34
VPS45-207ENST00000477558 CPSF6Q16630 551 aaKnown RBP eCLIP6.71□□□□□ -1.34
VPS45-207ENST00000477558 PROSER3Q2NL68 480 aa6.71□□□□□ -1.34
VPS45-207ENST00000477558 ARHGAP27Q6ZUM4 889 aa6.71□□□□□ -1.34
VPS45-207ENST00000477558 TRMT2AQ8IZ69 625 aaKnown RBP6.71□□□□□ -1.34
VPS45-207ENST00000477558 NLGN1Q8N2Q7 840 aa6.71□□□□□ -1.34
VPS45-207ENST00000477558 ZNF512BQ96KM6 892 aaPredicted RBP6.71□□□□□ -1.34
VPS45-207ENST00000477558 Q96M66 194 aa6.71□□□□□ -1.34
VPS45-207ENST00000477558 TANGO6Q9C0B7 1094 aa6.71□□□□□ -1.34
VPS45-207ENST00000477558 ZNF408Q9H9D4 720 aa6.71□□□□□ -1.34
VPS45-207ENST00000477558 MAPK8IP1Q9UQF2 711 aa6.71□□□□□ -1.34
VPS45-207ENST00000477558 TNRC6CQ9HCJ0 1690 aaKnown RBP6.71□□□□□ -1.34
VPS45-207ENST00000477558 ARFGEF1Q9Y6D6 1849 aa6.71□□□□□ -1.34
VPS45-207ENST00000477558 LTBP3Q9NS15 1303 aa6.71□□□□□ -1.34
VPS45-207ENST00000477558 A0A1W2PQH9 124 aa6.7□□□□□ -1.34
VPS45-207ENST00000477558 POLRMTO00411 1230 aaKnown RBP6.7□□□□□ -1.34
VPS45-207ENST00000477558 COBLO75128 1261 aa6.7□□□□□ -1.34
VPS45-207ENST00000477558 CYP7A1P22680 504 aa6.7□□□□□ -1.34
VPS45-207ENST00000477558 CANXP27824 592 aaKnown RBP6.7□□□□□ -1.34
VPS45-207ENST00000477558 RFC4P35249 363 aa6.7□□□□□ -1.34
VPS45-207ENST00000477558 NKPD1Q17RQ9 610 aa6.7□□□□□ -1.34
VPS45-207ENST00000477558 ZNF746Q6NUN9 644 aaPredicted RBP6.7□□□□□ -1.34
VPS45-207ENST00000477558 CLEC4GQ6UXB4 293 aa6.7□□□□□ -1.34
VPS45-207ENST00000477558 TTC6Q86TZ1 520 aa6.7□□□□□ -1.34
VPS45-207ENST00000477558 TAB3Q8N5C8 712 aaPredicted RBP6.7□□□□□ -1.34
VPS45-207ENST00000477558 TSPYL6Q8N831 410 aa6.7□□□□□ -1.34
VPS45-207ENST00000477558 C8orf58Q8NAV2 365 aa6.7□□□□□ -1.34
VPS45-207ENST00000477558 OR6P1Q8NGX9 317 aa6.7□□□□□ -1.34
VPS45-207ENST00000477558 TSR2Q969E8 191 aaKnown RBP6.7□□□□□ -1.34
VPS45-207ENST00000477558 SLC6A18Q96N87 628 aa6.7□□□□□ -1.34
VPS45-207ENST00000477558 DDX21Q9NR30 783 aaKnown RBP eCLIP6.7□□□□□ -1.34
VPS45-207ENST00000477558 CARMIL3Q8ND23 1372 aa6.7□□□□□ -1.34
VPS45-207ENST00000477558 ERVV-1B6SEH8 477 aa6.69□□□□□ -1.34
VPS45-207ENST00000477558 SMAD7O15105 426 aaKnown RBP6.69□□□□□ -1.34
VPS45-207ENST00000477558 MMP10P09238 476 aa6.69□□□□□ -1.34
VPS45-207ENST00000477558 PIP4K2AP48426 406 aaPredicted RBP6.69□□□□□ -1.34
VPS45-207ENST00000477558 NFIXQ14938 502 aa6.69□□□□□ -1.34
VPS45-207ENST00000477558 MSMPQ1L6U9 139 aa6.69□□□□□ -1.34
VPS45-207ENST00000477558 DDX60Q8IY21 1712 aaKnown RBP6.69□□□□□ -1.34
VPS45-207ENST00000477558 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.69□□□□□ -1.34
VPS45-207ENST00000477558 CAPN6Q9Y6Q1 641 aa6.69□□□□□ -1.34
VPS45-207ENST00000477558 MAP3K15Q6ZN16 1313 aa6.69□□□□□ -1.34
VPS45-207ENST00000477558 C9IYK1 514 aa6.68□□□□□ -1.34
VPS45-207ENST00000477558 CLEC3AO75596 197 aa6.68□□□□□ -1.34
VPS45-207ENST00000477558 CEACAM5P06731 702 aa6.68□□□□□ -1.34
VPS45-207ENST00000477558 ZNF865P0CJ78 1059 aaPredicted RBP6.68□□□□□ -1.34
VPS45-207ENST00000477558 POLD1P28340 1107 aa6.68□□□□□ -1.34
VPS45-207ENST00000477558 GRIK1P39086 918 aa6.68□□□□□ -1.34
VPS45-207ENST00000477558 CCNFP41002 786 aa6.68□□□□□ -1.34
VPS45-207ENST00000477558 TNK2Q07912 1038 aa6.68□□□□□ -1.34
VPS45-207ENST00000477558 SLFN5Q08AF3 891 aa6.68□□□□□ -1.34
VPS45-207ENST00000477558 NBPF12Q5TAG4 269 aaPredicted RBP6.68□□□□□ -1.34
VPS45-207ENST00000477558 CDKAL1Q5VV42 579 aa6.68□□□□□ -1.34
VPS45-207ENST00000477558 MCTP1Q6DN14 999 aa6.68□□□□□ -1.34
VPS45-207ENST00000477558 TTLL7Q6ZT98 887 aa6.68□□□□□ -1.34
VPS45-207ENST00000477558 SPACA3Q8IXA5 215 aa6.68□□□□□ -1.34
VPS45-207ENST00000477558 NETO1Q8TDF5 533 aa6.68□□□□□ -1.34
VPS45-207ENST00000477558 RNF141Q8WVD5 230 aa6.68□□□□□ -1.34
VPS45-207ENST00000477558 SYT17Q9BSW7 474 aa6.68□□□□□ -1.34
VPS45-207ENST00000477558 MKNK2Q9HBH9 465 aa6.68□□□□□ -1.34
VPS45-207ENST00000477558 CHPF2Q9P2E5 772 aa6.68□□□□□ -1.34
VPS45-207ENST00000477558 DBF4Q9UBU7 674 aaPredicted RBP6.68□□□□□ -1.34
VPS45-207ENST00000477558 PCDHB10Q9UN67 800 aa6.68□□□□□ -1.34
VPS45-207ENST00000477558 CD2APQ9Y5K6 639 aa6.68□□□□□ -1.34
VPS45-207ENST00000477558 VAMP4O75379 141 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 ATP2B1P20020 1258 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 CD97P48960 835 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 CASP7P55210 303 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 CHMP4BP1P59074 171 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 BNIP3Q12983 259 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 TBC1D9BQ66K14 1250 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 C22orf34Q6ZV56 151 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 PPFIBP1Q86W92 1011 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 MFSD4AQ8N468 514 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 DHX38Q92620 1227 aaKnown RBP6.67□□□□□ -1.34
VPS45-207ENST00000477558 FBXL18Q96ME1 805 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 HSPA12BQ96MM6 686 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 MYH16Q9H6N6 1097 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 FAM86C1Q9NVL1 165 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 LAS1LQ9Y4W2 734 aaKnown RBP6.67□□□□□ -1.34
VPS45-207ENST00000477558 ZBED9Q6R2W3 1325 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 UBN2Q6ZU65 1347 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 ADCY9O60503 1353 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 CHD4Q14839 1912 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 WASH4PA8MWX3 477 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 FAM155AB1AL88 458 aaPredicted RBP6.67□□□□□ -1.34
VPS45-207ENST00000477558 ANXA1P04083 346 aa6.67□□□□□ -1.34
VPS45-207ENST00000477558 TP53P04637 393 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms