RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 YBX2Q9Y2T7 364 aaKnown RBP17.73■□□□□ 0.43
COL1A1-203ENST00000471344 SLC12A7Q9Y666 1083 aa17.73■□□□□ 0.43
COL1A1-203ENST00000471344 TRIP12Q14669 1992 aaPredicted RBP17.73■□□□□ 0.43
COL1A1-203ENST00000471344 TET1Q8NFU7 2136 aa17.72■□□□□ 0.43
COL1A1-203ENST00000471344 F2P00734 622 aa17.72■□□□□ 0.43
COL1A1-203ENST00000471344 HOXD8P13378 290 aaPredicted RBP17.72■□□□□ 0.43
COL1A1-203ENST00000471344 RABGGTBP53611 331 aa17.72■□□□□ 0.43
COL1A1-203ENST00000471344 ZNF200P98182 395 aaPredicted RBP17.72■□□□□ 0.43
COL1A1-203ENST00000471344 PTPN11Q06124 597 aaPredicted RBP17.72■□□□□ 0.43
COL1A1-203ENST00000471344 TRAF1Q13077 416 aa17.72■□□□□ 0.43
COL1A1-203ENST00000471344 MFSD10Q14728 455 aa17.72■□□□□ 0.43
COL1A1-203ENST00000471344 UBE2SQ16763 222 aa17.72■□□□□ 0.43
COL1A1-203ENST00000471344 KIAA0753Q2KHM9 967 aa17.72■□□□□ 0.43
COL1A1-203ENST00000471344 SGMS1Q86VZ5 419 aa17.72■□□□□ 0.43
COL1A1-203ENST00000471344 WNT8BQ93098 351 aa17.72■□□□□ 0.43
COL1A1-203ENST00000471344 ZNF576Q9H609 170 aa17.72■□□□□ 0.43
COL1A1-203ENST00000471344 SEC63Q9UGP8 760 aaKnown RBP17.72■□□□□ 0.43
COL1A1-203ENST00000471344 BRPF3Q9ULD4 1205 aa17.72■□□□□ 0.43
COL1A1-203ENST00000471344 NOD1Q9Y239 953 aa17.72■□□□□ 0.43
COL1A1-203ENST00000471344 TMEM265A0A087WTH1 108 aa17.71■□□□□ 0.43
COL1A1-203ENST00000471344 ZBBXA8MT70 800 aa17.71■□□□□ 0.43
COL1A1-203ENST00000471344 HAS3O00219 553 aa17.71■□□□□ 0.43
COL1A1-203ENST00000471344 PITPNM1O00562 1244 aa17.71■□□□□ 0.43
COL1A1-203ENST00000471344 IQCF3P0C7M6 154 aa17.71■□□□□ 0.43
COL1A1-203ENST00000471344 CPA1P15085 419 aa17.71■□□□□ 0.43
COL1A1-203ENST00000471344 MYOGP15173 224 aa17.71■□□□□ 0.43
COL1A1-203ENST00000471344 FOSL2P15408 326 aa17.71■□□□□ 0.43
COL1A1-203ENST00000471344 SMARCA1P28370 1054 aa17.71■□□□□ 0.43
COL1A1-203ENST00000471344 EXOSC10Q01780 885 aaKnown RBP17.71■□□□□ 0.43
COL1A1-203ENST00000471344 APOA5Q6Q788 366 aa17.71■□□□□ 0.43
COL1A1-203ENST00000471344 SESTD1Q86VW0 696 aa17.71■□□□□ 0.43
COL1A1-203ENST00000471344 TMTC2Q8N394 836 aa17.71■□□□□ 0.43
COL1A1-203ENST00000471344 FANCBQ8NB91 859 aa17.71■□□□□ 0.43
COL1A1-203ENST00000471344 MAFAQ8NHW3 353 aaPredicted RBP17.71■□□□□ 0.43
COL1A1-203ENST00000471344 SMARCC2Q8TAQ2 1214 aa17.71■□□□□ 0.43
COL1A1-203ENST00000471344 INPP4AQ96PE3 977 aaPredicted RBP17.71■□□□□ 0.43
COL1A1-203ENST00000471344 NEK1Q96PY6 1258 aa17.71■□□□□ 0.43
COL1A1-203ENST00000471344 LZTS2Q9BRK4 669 aa17.71■□□□□ 0.43
COL1A1-203ENST00000471344 NKX2-4Q9H2Z4 354 aa17.71■□□□□ 0.43
COL1A1-203ENST00000471344 GTF2IRD1Q9UHL9 959 aa17.71■□□□□ 0.43
COL1A1-203ENST00000471344 CNTNAP5Q8WYK1 1306 aa17.71■□□□□ 0.42
COL1A1-203ENST00000471344 PTPRSQ13332 1948 aa17.7■□□□□ 0.42
COL1A1-203ENST00000471344 CALM1P0DP23 149 aa17.7■□□□□ 0.42
COL1A1-203ENST00000471344 CALM2P0DP24 149 aa17.7■□□□□ 0.42
COL1A1-203ENST00000471344 CALM3P0DP25 149 aa17.7■□□□□ 0.42
COL1A1-203ENST00000471344 GNAQP50148 359 aa17.7■□□□□ 0.42
COL1A1-203ENST00000471344 GPNMBQ14956 572 aa17.7■□□□□ 0.42
COL1A1-203ENST00000471344 RNF20Q5VTR2 975 aa17.7■□□□□ 0.42
COL1A1-203ENST00000471344 RPUSD2Q8IZ73 545 aaKnown RBP17.7■□□□□ 0.42
COL1A1-203ENST00000471344 C7orf31Q8N865 590 aa17.7■□□□□ 0.42
COL1A1-203ENST00000471344 CCDC136Q96JN2 1154 aa17.7■□□□□ 0.42
COL1A1-203ENST00000471344 SPTBN5Q9NRC6 3674 aaKnown RBP17.69■□□□□ 0.42
COL1A1-203ENST00000471344 PIK3CDO00329 1044 aa17.69■□□□□ 0.42
COL1A1-203ENST00000471344 TCTN1Q2MV58 587 aa17.69■□□□□ 0.42
COL1A1-203ENST00000471344 KCNV1Q6PIU1 500 aa17.69■□□□□ 0.42
COL1A1-203ENST00000471344 CYFIP1Q7L576 1253 aa17.69■□□□□ 0.42
COL1A1-203ENST00000471344 HEATR3Q7Z4Q2 680 aa17.69■□□□□ 0.42
COL1A1-203ENST00000471344 RETREG2Q8NC44 543 aa17.69■□□□□ 0.42
COL1A1-203ENST00000471344 C16orf70Q9BSU1 422 aa17.69■□□□□ 0.42
COL1A1-203ENST00000471344 MTIF3Q9H2K0 278 aaKnown RBP17.69■□□□□ 0.42
COL1A1-203ENST00000471344 MLXIPQ9HAP2 919 aa17.69■□□□□ 0.42
COL1A1-203ENST00000471344 SLC4A7Q9Y6M7 1214 aa17.69■□□□□ 0.42
COL1A1-203ENST00000471344 TRANK1O15050 2925 aa17.69■□□□□ 0.42
COL1A1-203ENST00000471344 SPATA31C2B4DYI2 1134 aa17.68■□□□□ 0.42
COL1A1-203ENST00000471344 TGFB3P10600 412 aa17.68■□□□□ 0.42
COL1A1-203ENST00000471344 ICAM3P32942 547 aa17.68■□□□□ 0.42
COL1A1-203ENST00000471344 FUT2Q10981 343 aa17.68■□□□□ 0.42
COL1A1-203ENST00000471344 BFSP2Q13515 415 aa17.68■□□□□ 0.42
COL1A1-203ENST00000471344 PCNX4Q63HM2 1172 aa17.68■□□□□ 0.42
COL1A1-203ENST00000471344 WWC2Q6AWC2 1192 aa17.68■□□□□ 0.42
COL1A1-203ENST00000471344 TYW1BQ6NUM6 668 aa17.68■□□□□ 0.42
COL1A1-203ENST00000471344 DHX32Q7L7V1 743 aaKnown RBP17.68■□□□□ 0.42
COL1A1-203ENST00000471344 TRIM50Q86XT4 487 aa17.68■□□□□ 0.42
COL1A1-203ENST00000471344 USP38Q8NB14 1042 aa17.68■□□□□ 0.42
COL1A1-203ENST00000471344 CUL5Q93034 780 aa17.68■□□□□ 0.42
COL1A1-203ENST00000471344 KATNAL1Q9BW62 490 aa17.68■□□□□ 0.42
COL1A1-203ENST00000471344 PRDM12Q9H4Q4 367 aa17.68■□□□□ 0.42
COL1A1-203ENST00000471344 PSTPIP2Q9H939 334 aa17.68■□□□□ 0.42
COL1A1-203ENST00000471344 PPFIA4O75335 1185 aa17.67■□□□□ 0.42
COL1A1-203ENST00000471344 LGALS2P05162 132 aa17.67■□□□□ 0.42
COL1A1-203ENST00000471344 PFKMP08237 780 aa17.67■□□□□ 0.42
COL1A1-203ENST00000471344 CKBP12277 381 aa17.67■□□□□ 0.42
COL1A1-203ENST00000471344 ATP2A2P16615 1042 aaKnown RBP17.67■□□□□ 0.42
COL1A1-203ENST00000471344 SP4Q02446 784 aa17.67■□□□□ 0.42
COL1A1-203ENST00000471344 TRIM71Q2Q1W2 868 aaKnown RBP17.67■□□□□ 0.42
COL1A1-203ENST00000471344 TSGA10IPQ3SY00 556 aa17.67■□□□□ 0.42
COL1A1-203ENST00000471344 GNPTABQ3T906 1256 aa17.67■□□□□ 0.42
COL1A1-203ENST00000471344 TRAF7Q6Q0C0 670 aa17.67■□□□□ 0.42
COL1A1-203ENST00000471344 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.67■□□□□ 0.42
COL1A1-203ENST00000471344 FTOQ9C0B1 505 aaKnown RBP eCLIP17.67■□□□□ 0.42
COL1A1-203ENST00000471344 FAM217BQ9NTX9 383 aaPredicted RBP17.67■□□□□ 0.42
COL1A1-203ENST00000471344 KLF18A0A0U1RQI7 1052 aa17.66■□□□□ 0.42
COL1A1-203ENST00000471344 ZBTB43O43298 467 aa17.66■□□□□ 0.42
COL1A1-203ENST00000471344 FIBPO43427 364 aa17.66■□□□□ 0.42
COL1A1-203ENST00000471344 NBNO60934 754 aa17.66■□□□□ 0.42
COL1A1-203ENST00000471344 SELPP16109 830 aa17.66■□□□□ 0.42
COL1A1-203ENST00000471344 CDC27P30260 824 aa17.66■□□□□ 0.42
COL1A1-203ENST00000471344 RFC2P35250 354 aa17.66■□□□□ 0.42
COL1A1-203ENST00000471344 RAB30Q15771 203 aa17.66■□□□□ 0.42
COL1A1-203ENST00000471344 RTN1Q16799 776 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms