RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 C16orf70Q9BSU1 422 aa18.63■□□□□ 0.57
GPC1-206ENST00000455111 ALG1Q9BT22 464 aa18.63■□□□□ 0.57
GPC1-206ENST00000455111 LSG1Q9H089 658 aaKnown RBP18.63■□□□□ 0.57
GPC1-206ENST00000455111 MTIF3Q9H2K0 278 aaKnown RBP18.63■□□□□ 0.57
GPC1-206ENST00000455111 CERS4Q9HA82 394 aa18.63■□□□□ 0.57
GPC1-206ENST00000455111 CKBP12277 381 aa18.62■□□□□ 0.57
GPC1-206ENST00000455111 CASTP20810 708 aaKnown RBP18.62■□□□□ 0.57
GPC1-206ENST00000455111 DEFB103AP81534 67 aa18.62■□□□□ 0.57
GPC1-206ENST00000455111 MFSD10Q14728 455 aa18.62■□□□□ 0.57
GPC1-206ENST00000455111 DGKDQ16760 1214 aa18.62■□□□□ 0.57
GPC1-206ENST00000455111 PPP2R2DQ66LE6 453 aa18.62■□□□□ 0.57
GPC1-206ENST00000455111 KRT40Q6A162 431 aa18.62■□□□□ 0.57
GPC1-206ENST00000455111 MAP3K20Q9NYL2 800 aaKnown RBP18.62■□□□□ 0.57
GPC1-206ENST00000455111 MICAL3Q7RTP6 2002 aa18.62■□□□□ 0.57
GPC1-206ENST00000455111 PNMA6FA0A0J9YX94 578 aa18.61■□□□□ 0.57
GPC1-206ENST00000455111 LCHNA4D1U4 455 aa18.61■□□□□ 0.57
GPC1-206ENST00000455111 GGPS1O95749 300 aa18.61■□□□□ 0.57
GPC1-206ENST00000455111 CXCL10P02778 98 aa18.61■□□□□ 0.57
GPC1-206ENST00000455111 IGFBP4P22692 258 aa18.61■□□□□ 0.57
GPC1-206ENST00000455111 TAP1Q03518 808 aa18.61■□□□□ 0.57
GPC1-206ENST00000455111 MKRN4PQ13434 485 aaPredicted RBP18.61■□□□□ 0.57
GPC1-206ENST00000455111 BFSP2Q13515 415 aa18.61■□□□□ 0.57
GPC1-206ENST00000455111 LAMC2Q13753 1193 aa18.61■□□□□ 0.57
GPC1-206ENST00000455111 KIAA0753Q2KHM9 967 aa18.61■□□□□ 0.57
GPC1-206ENST00000455111 TMEM67Q5HYA8 995 aa18.61■□□□□ 0.57
GPC1-206ENST00000455111 FCHSD1Q86WN1 690 aa18.61■□□□□ 0.57
GPC1-206ENST00000455111 HERC6Q8IVU3 1022 aa18.61■□□□□ 0.57
GPC1-206ENST00000455111 DHX37Q8IY37 1157 aaKnown RBP18.61■□□□□ 0.57
GPC1-206ENST00000455111 PIBF1Q8WXW3 757 aa18.61■□□□□ 0.57
GPC1-206ENST00000455111 PLEKHA8P1O95397 391 aa18.6■□□□□ 0.57
GPC1-206ENST00000455111 HOXC8P31273 242 aa18.6■□□□□ 0.57
GPC1-206ENST00000455111 WDR5P61964 334 aaKnown RBP18.6■□□□□ 0.57
GPC1-206ENST00000455111 TRDNQ13061 729 aa18.6■□□□□ 0.57
GPC1-206ENST00000455111 LRRC8DQ7L1W4 858 aa18.6■□□□□ 0.57
GPC1-206ENST00000455111 CMTR1Q8N1G2 835 aaKnown RBP18.6■□□□□ 0.57
GPC1-206ENST00000455111 RETREG2Q8NC44 543 aa18.6■□□□□ 0.57
GPC1-206ENST00000455111 CAGE1Q8TC20 777 aa18.6■□□□□ 0.57
GPC1-206ENST00000455111 AFAP1L1Q8TED9 768 aa18.6■□□□□ 0.57
GPC1-206ENST00000455111 RUFY2Q8WXA3 655 aa18.6■□□□□ 0.57
GPC1-206ENST00000455111 SLC9A7Q96T83 725 aa18.6■□□□□ 0.57
GPC1-206ENST00000455111 TCF20Q9UGU0 1960 aaKnown RBP18.59■□□□□ 0.57
GPC1-206ENST00000455111 GCOM1H8Y6P7 765 aaPredicted RBP18.59■□□□□ 0.57
GPC1-206ENST00000455111 MEIS2O14770 477 aa18.59■□□□□ 0.57
GPC1-206ENST00000455111 LPXNO60711 386 aa18.59■□□□□ 0.57
GPC1-206ENST00000455111 POLR2MP0CAP2 368 aa18.59■□□□□ 0.57
GPC1-206ENST00000455111 SELPP16109 830 aa18.59■□□□□ 0.57
GPC1-206ENST00000455111 TJAP1Q5JTD0 557 aa18.59■□□□□ 0.57
GPC1-206ENST00000455111 ZNF618Q5T7W0 954 aa18.59■□□□□ 0.57
GPC1-206ENST00000455111 ZNF654Q8IZM8 581 aa18.59■□□□□ 0.57
GPC1-206ENST00000455111 SRBD1Q8N5C6 995 aaKnown RBP18.59■□□□□ 0.57
GPC1-206ENST00000455111 SAMD3Q8N6K7 520 aa18.59■□□□□ 0.57
GPC1-206ENST00000455111 INPP4AQ96PE3 977 aaPredicted RBP18.59■□□□□ 0.57
GPC1-206ENST00000455111 FTOQ9C0B1 505 aaKnown RBP eCLIP18.59■□□□□ 0.57
GPC1-206ENST00000455111 NOD1Q9Y239 953 aa18.59■□□□□ 0.57
GPC1-206ENST00000455111 SH2B2O14492 632 aaPredicted RBP18.58■□□□□ 0.56
GPC1-206ENST00000455111 RXRAP19793 462 aa18.58■□□□□ 0.56
GPC1-206ENST00000455111 USP17L6PQ6QN14 398 aa18.58■□□□□ 0.56
GPC1-206ENST00000455111 RALYLQ86SE5 291 aaKnown RBP18.58■□□□□ 0.56
GPC1-206ENST00000455111 RAB11FIP4Q86YS3 637 aa18.58■□□□□ 0.56
GPC1-206ENST00000455111 PHOSPHO2Q8TCD6 241 aa18.58■□□□□ 0.56
GPC1-206ENST00000455111 SPATA33Q96N06 139 aa18.58■□□□□ 0.56
GPC1-206ENST00000455111 SPZ1Q9BXG8 430 aa18.58■□□□□ 0.56
GPC1-206ENST00000455111 MTCH2Q9Y6C9 303 aa18.58■□□□□ 0.56
GPC1-206ENST00000455111 PRRC2BQ5JSZ5 2229 aaKnown RBP18.57■□□□□ 0.56
GPC1-206ENST00000455111 SLC27A2O14975 620 aa18.57■□□□□ 0.56
GPC1-206ENST00000455111 PRC1O43663 620 aa18.57■□□□□ 0.56
GPC1-206ENST00000455111 PPFIA4O75335 1185 aa18.57■□□□□ 0.56
GPC1-206ENST00000455111 ACTN1P12814 892 aa18.57■□□□□ 0.56
GPC1-206ENST00000455111 POU3F3P20264 500 aaPredicted RBP18.57■□□□□ 0.56
GPC1-206ENST00000455111 CCND2P30279 289 aa18.57■□□□□ 0.56
GPC1-206ENST00000455111 ICAM3P32942 547 aa18.57■□□□□ 0.56
GPC1-206ENST00000455111 PTK7Q13308 1070 aa18.57■□□□□ 0.56
GPC1-206ENST00000455111 NECTIN1Q15223 517 aa18.57■□□□□ 0.56
GPC1-206ENST00000455111 C7orf31Q8N865 590 aa18.57■□□□□ 0.56
GPC1-206ENST00000455111 RTEL1Q9NZ71 1219 aa18.57■□□□□ 0.56
GPC1-206ENST00000455111 ATG2AQ2TAZ0 1938 aa18.57■□□□□ 0.56
GPC1-206ENST00000455111 SPATA31C2B4DYI2 1134 aa18.56■□□□□ 0.56
GPC1-206ENST00000455111 BAIAP3O94812 1187 aa18.56■□□□□ 0.56
GPC1-206ENST00000455111 LGALS2P05162 132 aa18.56■□□□□ 0.56
GPC1-206ENST00000455111 CATIPQ7Z7H3 387 aa18.56■□□□□ 0.56
GPC1-206ENST00000455111 SERINC5Q86VE9 423 aa18.56■□□□□ 0.56
GPC1-206ENST00000455111 TRIM50Q86XT4 487 aa18.56■□□□□ 0.56
GPC1-206ENST00000455111 ASB2Q96Q27 587 aa18.56■□□□□ 0.56
GPC1-206ENST00000455111 MAP3K14Q99558 947 aa18.56■□□□□ 0.56
GPC1-206ENST00000455111 ESYT1Q9BSJ8 1104 aa18.56■□□□□ 0.56
GPC1-206ENST00000455111 KATNAL1Q9BW62 490 aa18.56■□□□□ 0.56
GPC1-206ENST00000455111 LRRC2Q9BYS8 371 aa18.56■□□□□ 0.56
GPC1-206ENST00000455111 THEGQ9P2T0 379 aa18.56■□□□□ 0.56
GPC1-206ENST00000455111 hCG_1642624A0A1W2PR95 340 aa18.55■□□□□ 0.56
GPC1-206ENST00000455111 ERICH2A1L162 156 aa18.55■□□□□ 0.56
GPC1-206ENST00000455111 TGFB3P10600 412 aa18.55■□□□□ 0.56
GPC1-206ENST00000455111 TFF2Q03403 129 aa18.55■□□□□ 0.56
GPC1-206ENST00000455111 CNKSR3Q6P9H4 555 aa18.55■□□□□ 0.56
GPC1-206ENST00000455111 KCNV1Q6PIU1 500 aa18.55■□□□□ 0.56
GPC1-206ENST00000455111 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.55■□□□□ 0.56
GPC1-206ENST00000455111 GPR20Q99678 358 aa18.55■□□□□ 0.56
GPC1-206ENST00000455111 PIK3CDO00329 1044 aa18.54■□□□□ 0.56
GPC1-206ENST00000455111 TREHO43280 583 aa18.54■□□□□ 0.56
GPC1-206ENST00000455111 ATP9AO75110 1047 aa18.54■□□□□ 0.56
GPC1-206ENST00000455111 DDAH1O94760 285 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms