RNA–Protein interactions for RNA: ENST00000426530.2

PTPMT1-203, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-203ENST00000426530 MICU3Q86XE3 530 aa28.82■■■□□ 2.2
PTPMT1-203ENST00000426530 TMTC2Q8N394 836 aa28.82■■■□□ 2.2
PTPMT1-203ENST00000426530 RETREG2Q8NC44 543 aa28.82■■■□□ 2.2
PTPMT1-203ENST00000426530 SMARCC2Q8TAQ2 1214 aa28.82■■■□□ 2.2
PTPMT1-203ENST00000426530 RTEL1Q9NZ71 1219 aa28.82■■■□□ 2.2
PTPMT1-203ENST00000426530 FRMPD4Q14CM0 1322 aa28.82■■■□□ 2.2
PTPMT1-203ENST00000426530 TET1Q8NFU7 2136 aa28.82■■■□□ 2.2
PTPMT1-203ENST00000426530 PITPNM1O00562 1244 aa28.81■■■□□ 2.2
PTPMT1-203ENST00000426530 F2P00734 622 aa28.81■■■□□ 2.2
PTPMT1-203ENST00000426530 SESTD1Q86VW0 696 aa28.81■■■□□ 2.2
PTPMT1-203ENST00000426530 DHX38Q92620 1227 aaKnown RBP28.81■■■□□ 2.2
PTPMT1-203ENST00000426530 LZTS2Q9BRK4 669 aa28.81■■■□□ 2.2
PTPMT1-203ENST00000426530 NKX2-4Q9H2Z4 354 aa28.81■■■□□ 2.2
PTPMT1-203ENST00000426530 GTF2IRD1Q9UHL9 959 aa28.81■■■□□ 2.2
PTPMT1-203ENST00000426530 YBX2Q9Y2T7 364 aaKnown RBP28.81■■■□□ 2.2
PTPMT1-203ENST00000426530 SLC4A7Q9Y6M7 1214 aa28.81■■■□□ 2.2
PTPMT1-203ENST00000426530 CDC45O75419 566 aa28.8■■■□□ 2.2
PTPMT1-203ENST00000426530 CALM1P0DP23 149 aa28.8■■■□□ 2.2
PTPMT1-203ENST00000426530 CALM2P0DP24 149 aa28.8■■■□□ 2.2
PTPMT1-203ENST00000426530 CALM3P0DP25 149 aa28.8■■■□□ 2.2
PTPMT1-203ENST00000426530 SMARCA1P28370 1054 aa28.8■■■□□ 2.2
PTPMT1-203ENST00000426530 GNAQP50148 359 aa28.8■■■□□ 2.2
PTPMT1-203ENST00000426530 BFSP2Q13515 415 aa28.8■■■□□ 2.2
PTPMT1-203ENST00000426530 KIAA0753Q2KHM9 967 aa28.8■■■□□ 2.2
PTPMT1-203ENST00000426530 KCNV1Q6PIU1 500 aa28.8■■■□□ 2.2
PTPMT1-203ENST00000426530 C7orf31Q8N865 590 aa28.8■■■□□ 2.2
PTPMT1-203ENST00000426530 MSRAQ9UJ68 235 aa28.8■■■□□ 2.2
PTPMT1-203ENST00000426530 HAS3O00219 553 aa28.79■■■□□ 2.2
PTPMT1-203ENST00000426530 DLL1O00548 723 aa28.79■■■□□ 2.2
PTPMT1-203ENST00000426530 MEIS2O14770 477 aa28.79■■■□□ 2.2
PTPMT1-203ENST00000426530 SEMA3FQ13275 785 aa28.79■■■□□ 2.2
PTPMT1-203ENST00000426530 ADCK5Q3MIX3 580 aa28.79■■■□□ 2.2
PTPMT1-203ENST00000426530 RNF20Q5VTR2 975 aa28.79■■■□□ 2.2
PTPMT1-203ENST00000426530 TMTC3Q6ZXV5 915 aa28.79■■■□□ 2.2
PTPMT1-203ENST00000426530 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.79■■■□□ 2.2
PTPMT1-203ENST00000426530 RASEFQ8IZ41 740 aa28.79■■■□□ 2.2
PTPMT1-203ENST00000426530 CUL5Q93034 780 aa28.79■■■□□ 2.2
PTPMT1-203ENST00000426530 KATNAL1Q9BW62 490 aa28.79■■■□□ 2.2
PTPMT1-203ENST00000426530 MLXIPQ9HAP2 919 aa28.79■■■□□ 2.2
PTPMT1-203ENST00000426530 MYO9BQ13459 2157 aa28.78■■■□□ 2.2
PTPMT1-203ENST00000426530 PFKMP08237 780 aa28.78■■■□□ 2.2
PTPMT1-203ENST00000426530 HOXD8P13378 290 aaPredicted RBP28.78■■■□□ 2.2
PTPMT1-203ENST00000426530 MYOGP15173 224 aa28.78■■■□□ 2.2
PTPMT1-203ENST00000426530 ZNF200P98182 395 aaPredicted RBP28.78■■■□□ 2.2
PTPMT1-203ENST00000426530 RAB30Q15771 203 aa28.78■■■□□ 2.2
PTPMT1-203ENST00000426530 INPP4AQ96PE3 977 aaPredicted RBP28.78■■■□□ 2.2
PTPMT1-203ENST00000426530 NEK1Q96PY6 1258 aa28.78■■■□□ 2.2
PTPMT1-203ENST00000426530 FTOQ9C0B1 505 aaKnown RBP eCLIP28.78■■■□□ 2.2
PTPMT1-203ENST00000426530 PRUNE2Q8WUY3 3088 aa28.77■■■□□ 2.2
PTPMT1-203ENST00000426530 TGFB3P10600 412 aa28.77■■■□□ 2.2
PTPMT1-203ENST00000426530 RFC2P35250 354 aa28.77■■■□□ 2.2
PTPMT1-203ENST00000426530 HIC1Q14526 733 aa28.77■■■□□ 2.2
PTPMT1-203ENST00000426530 GNPTABQ3T906 1256 aa28.77■■■□□ 2.2
PTPMT1-203ENST00000426530 FANCBQ8NB91 859 aa28.77■■■□□ 2.2
PTPMT1-203ENST00000426530 PRDM12Q9H4Q4 367 aa28.77■■■□□ 2.2
PTPMT1-203ENST00000426530 ATP2A2P16615 1042 aaKnown RBP28.76■■■□□ 2.19
PTPMT1-203ENST00000426530 UBE2SQ16763 222 aa28.76■■■□□ 2.19
PTPMT1-203ENST00000426530 SGMS1Q86VZ5 419 aa28.76■■■□□ 2.19
PTPMT1-203ENST00000426530 CCDC155Q8N6L0 562 aa28.76■■■□□ 2.19
PTPMT1-203ENST00000426530 WNT8BQ93098 351 aa28.76■■■□□ 2.19
PTPMT1-203ENST00000426530 TELO2Q9Y4R8 837 aa28.76■■■□□ 2.19
PTPMT1-203ENST00000426530 PIK3CDO00329 1044 aa28.75■■■□□ 2.19
PTPMT1-203ENST00000426530 PPFIA4O75335 1185 aa28.75■■■□□ 2.19
PTPMT1-203ENST00000426530 APOA5Q6Q788 366 aa28.75■■■□□ 2.19
PTPMT1-203ENST00000426530 CAGE1Q8TC20 777 aa28.75■■■□□ 2.19
PTPMT1-203ENST00000426530 CCDC136Q96JN2 1154 aa28.75■■■□□ 2.19
PTPMT1-203ENST00000426530 C16orf70Q9BSU1 422 aa28.75■■■□□ 2.19
PTPMT1-203ENST00000426530 BRPF3Q9ULD4 1205 aa28.75■■■□□ 2.19
PTPMT1-203ENST00000426530 PTPRSQ13332 1948 aa28.75■■■□□ 2.19
PTPMT1-203ENST00000426530 SPATA31C2B4DYI2 1134 aa28.74■■■□□ 2.19
PTPMT1-203ENST00000426530 ACTN1P12814 892 aa28.74■■■□□ 2.19
PTPMT1-203ENST00000426530 ICAM3P32942 547 aa28.74■■■□□ 2.19
PTPMT1-203ENST00000426530 EXOSC10Q01780 885 aaKnown RBP28.74■■■□□ 2.19
PTPMT1-203ENST00000426530 PCNX4Q63HM2 1172 aa28.74■■■□□ 2.19
PTPMT1-203ENST00000426530 LRRC8DQ7L1W4 858 aa28.74■■■□□ 2.19
PTPMT1-203ENST00000426530 CYFIP1Q7L576 1253 aa28.74■■■□□ 2.19
PTPMT1-203ENST00000426530 HEATR3Q7Z4Q2 680 aa28.74■■■□□ 2.19
PTPMT1-203ENST00000426530 AFAP1L1Q8TED9 768 aa28.74■■■□□ 2.19
PTPMT1-203ENST00000426530 PSTPIP2Q9H939 334 aa28.74■■■□□ 2.19
PTPMT1-203ENST00000426530 CNTNAP5Q8WYK1 1306 aa28.73■■■□□ 2.19
PTPMT1-203ENST00000426530 FIBPO43427 364 aa28.73■■■□□ 2.19
PTPMT1-203ENST00000426530 STAM2O75886 525 aa28.73■■■□□ 2.19
PTPMT1-203ENST00000426530 LGALS2P05162 132 aa28.73■■■□□ 2.19
PTPMT1-203ENST00000426530 SELPP16109 830 aa28.73■■■□□ 2.19
PTPMT1-203ENST00000426530 SP4Q02446 784 aa28.73■■■□□ 2.19
PTPMT1-203ENST00000426530 GPNMBQ14956 572 aa28.73■■■□□ 2.19
PTPMT1-203ENST00000426530 SYNE3Q6ZMZ3 975 aa28.73■■■□□ 2.19
PTPMT1-203ENST00000426530 USP38Q8NB14 1042 aa28.73■■■□□ 2.19
PTPMT1-203ENST00000426530 SLC28A3Q9HAS3 691 aa28.73■■■□□ 2.19
PTPMT1-203ENST00000426530 CHD7Q9P2D1 2997 aa28.72■■■□□ 2.19
PTPMT1-203ENST00000426530 NOP56O00567 594 aaKnown RBP28.72■■■□□ 2.19
PTPMT1-203ENST00000426530 CKBP12277 381 aa28.72■■■□□ 2.19
PTPMT1-203ENST00000426530 CPA1P15085 419 aa28.72■■■□□ 2.19
PTPMT1-203ENST00000426530 DHX32Q7L7V1 743 aaKnown RBP28.72■■■□□ 2.19
PTPMT1-203ENST00000426530 PTK7Q13308 1070 aa28.71■■■□□ 2.19
PTPMT1-203ENST00000426530 METTL7BQ6UX53 244 aa28.71■■■□□ 2.19
PTPMT1-203ENST00000426530 TRIM50Q86XT4 487 aa28.71■■■□□ 2.19
PTPMT1-203ENST00000426530 GAS2L1Q99501 681 aaPredicted RBP28.71■■■□□ 2.19
PTPMT1-203ENST00000426530 PCDHA11Q9Y5I1 949 aa28.71■■■□□ 2.19
PTPMT1-203ENST00000426530 CUL9Q8IWT3 2517 aa28.7■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms