RNA–Protein interactions for RNA: ENST00000405315.8

NUCB1-201, Transcript of nucleobindin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NUCB1, Length 2,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-201ENST00000405315 ITIH3Q06033 890 aa16.2■□□□□ 0.18
NUCB1-201ENST00000405315 CCDC40Q4G0X9 1142 aa16.2■□□□□ 0.18
NUCB1-201ENST00000405315 CCDC181Q5TID7 509 aa16.2■□□□□ 0.18
NUCB1-201ENST00000405315 PPP1R18Q6NYC8 613 aa16.2■□□□□ 0.18
NUCB1-201ENST00000405315 SPATA4Q8NEY3 305 aa16.2■□□□□ 0.18
NUCB1-201ENST00000405315 TBC1D22AQ8WUA7 517 aa16.2■□□□□ 0.18
NUCB1-201ENST00000405315 HDAC7Q8WUI4 952 aa16.2■□□□□ 0.18
NUCB1-201ENST00000405315 LRRC1Q9BTT6 524 aa16.2■□□□□ 0.18
NUCB1-201ENST00000405315 JMJD4Q9H9V9 463 aa16.2■□□□□ 0.18
NUCB1-201ENST00000405315 SMARCAL1Q9NZC9 954 aa16.2■□□□□ 0.18
NUCB1-201ENST00000405315 LCMT1Q9UIC8 334 aa16.2■□□□□ 0.18
NUCB1-201ENST00000405315 SALL4Q9UJQ4 1053 aa16.2■□□□□ 0.18
NUCB1-201ENST00000405315 PNMA6FA0A0J9YX94 578 aa16.19■□□□□ 0.18
NUCB1-201ENST00000405315 PJA2O43164 708 aa16.19■□□□□ 0.18
NUCB1-201ENST00000405315 MARCH6O60337 910 aa16.19■□□□□ 0.18
NUCB1-201ENST00000405315 PPP1R11O60927 126 aaPredicted RBP16.19■□□□□ 0.18
NUCB1-201ENST00000405315 SSBP05455 408 aaKnown RBP eCLIP16.19■□□□□ 0.18
NUCB1-201ENST00000405315 SLC1A4P43007 532 aa16.19■□□□□ 0.18
NUCB1-201ENST00000405315 MATR3P43243 847 aaKnown RBP eCLIP16.19■□□□□ 0.18
NUCB1-201ENST00000405315 PPP4R3AQ6IN85 833 aa16.19■□□□□ 0.18
NUCB1-201ENST00000405315 FAM196AQ6ZSG2 479 aa16.19■□□□□ 0.18
NUCB1-201ENST00000405315 ADGRF4Q8IZF3 695 aa16.19■□□□□ 0.18
NUCB1-201ENST00000405315 DNAJC19Q96DA6 116 aa16.19■□□□□ 0.18
NUCB1-201ENST00000405315 NLRC4Q9NPP4 1024 aa16.19■□□□□ 0.18
NUCB1-201ENST00000405315 EHD2Q9NZN4 543 aa16.19■□□□□ 0.18
NUCB1-201ENST00000405315 COL4A3BPQ9Y5P4 624 aa16.19■□□□□ 0.18
NUCB1-201ENST00000405315 TRAF5O00463 557 aa16.19■□□□□ 0.18
NUCB1-201ENST00000405315 RASSF7Q02833 373 aa16.19■□□□□ 0.18
NUCB1-201ENST00000405315 ZNF543Q08ER8 600 aa16.19■□□□□ 0.18
NUCB1-201ENST00000405315 KCNMA1Q12791 1236 aa16.19■□□□□ 0.18
NUCB1-201ENST00000405315 ASTE1Q2TB18 679 aaPredicted RBP16.19■□□□□ 0.18
NUCB1-201ENST00000405315 ZCWPW2Q504Y3 356 aa16.19■□□□□ 0.18
NUCB1-201ENST00000405315 FAM26FQ5R3K3 315 aa16.19■□□□□ 0.18
NUCB1-201ENST00000405315 FOXR1Q6PIV2 292 aa16.19■□□□□ 0.18
NUCB1-201ENST00000405315 HAS1Q92839 578 aa16.19■□□□□ 0.18
NUCB1-201ENST00000405315 NGLY1Q96IV0 654 aa16.19■□□□□ 0.18
NUCB1-201ENST00000405315 ZFP91Q96JP5 570 aaPredicted RBP16.19■□□□□ 0.18
NUCB1-201ENST00000405315 EDEM3Q9BZQ6 932 aa16.19■□□□□ 0.18
NUCB1-201ENST00000405315 TSPYL1Q9H0U9 437 aa16.19■□□□□ 0.18
NUCB1-201ENST00000405315 PANK4Q9NVE7 773 aa16.19■□□□□ 0.18
NUCB1-201ENST00000405315 MYH4Q9Y623 1939 aa16.19■□□□□ 0.18
NUCB1-201ENST00000405315 IGKV6D-41A0A0C4DH26 115 aa16.18■□□□□ 0.18
NUCB1-201ENST00000405315 GOLGA6BA6NDN3 693 aa16.18■□□□□ 0.18
NUCB1-201ENST00000405315 MRPS25P82663 173 aaKnown RBP16.18■□□□□ 0.18
NUCB1-201ENST00000405315 FKBP3Q00688 224 aaKnown RBP16.18■□□□□ 0.18
NUCB1-201ENST00000405315 GABPAQ06546 454 aa16.18■□□□□ 0.18
NUCB1-201ENST00000405315 PDE4CQ08493 712 aa16.18■□□□□ 0.18
NUCB1-201ENST00000405315 MAPK8IP2Q13387 824 aaPredicted RBP16.18■□□□□ 0.18
NUCB1-201ENST00000405315 FOXR2Q6PJQ5 311 aa16.18■□□□□ 0.18
NUCB1-201ENST00000405315 LRRC31Q6UY01 552 aa16.18■□□□□ 0.18
NUCB1-201ENST00000405315 SND1Q7KZF4 910 aaKnown RBP eCLIP16.18■□□□□ 0.188e-9■■■□□ 18.5
NUCB1-201ENST00000405315 SRLQ86TD4 932 aa16.18■□□□□ 0.18
NUCB1-201ENST00000405315 RUBCNQ92622 972 aa16.18■□□□□ 0.18
NUCB1-201ENST00000405315 CUL5Q93034 780 aa16.18■□□□□ 0.18
NUCB1-201ENST00000405315 TBC1D7Q9P0N9 293 aa16.18■□□□□ 0.18
NUCB1-201ENST00000405315 POLLQ9UGP5 575 aa16.18■□□□□ 0.18
NUCB1-201ENST00000405315 FEZ2Q9UHY8 353 aaPredicted RBP16.18■□□□□ 0.18
NUCB1-201ENST00000405315 DMGDHQ9UI17 866 aaKnown RBP16.18■□□□□ 0.18
NUCB1-201ENST00000405315 RRP15Q9Y3B9 282 aaKnown RBP16.18■□□□□ 0.18
NUCB1-201ENST00000405315 SSU72P8A0A1W2PR75 194 aa16.18■□□□□ 0.18
NUCB1-201ENST00000405315 AGPSO00116 658 aa16.18■□□□□ 0.18
NUCB1-201ENST00000405315 BUB1O43683 1085 aa16.18■□□□□ 0.18
NUCB1-201ENST00000405315 TTLL1O95922 423 aa16.18■□□□□ 0.18
NUCB1-201ENST00000405315 CLK2P49760 499 aaKnown RBP16.18■□□□□ 0.18
NUCB1-201ENST00000405315 CRY2Q49AN0 593 aa16.18■□□□□ 0.18
NUCB1-201ENST00000405315 HGSNATQ68CP4 663 aa16.18■□□□□ 0.18
NUCB1-201ENST00000405315 TTBK2Q6IQ55 1244 aa16.18■□□□□ 0.18
NUCB1-201ENST00000405315 MTMR8Q96EF0 704 aa16.18■□□□□ 0.18
NUCB1-201ENST00000405315 RBM17Q96I25 401 aaKnown RBP16.18■□□□□ 0.18
NUCB1-201ENST00000405315 NOX5Q96PH1 765 aa16.18■□□□□ 0.18
NUCB1-201ENST00000405315 CEP72Q9P209 647 aa16.18■□□□□ 0.18
NUCB1-201ENST00000405315 MYO1CO00159 1063 aa16.17■□□□□ 0.18
NUCB1-201ENST00000405315 SLC7A5Q01650 507 aa16.17■□□□□ 0.18
NUCB1-201ENST00000405315 SEPT2Q15019 361 aa16.17■□□□□ 0.18
NUCB1-201ENST00000405315 TBC1D16Q8TBP0 767 aa16.17■□□□□ 0.18
NUCB1-201ENST00000405315 CERKQ8TCT0 537 aa16.17■□□□□ 0.18
NUCB1-201ENST00000405315 LSM14BQ9BX40 385 aaKnown RBP16.17■□□□□ 0.18
NUCB1-201ENST00000405315 FGFBP2Q9BYJ0 223 aa16.17■□□□□ 0.18
NUCB1-201ENST00000405315 C6orf229H3BNL8 230 aa16.17■□□□□ 0.18
NUCB1-201ENST00000405315 SLC16A2P36021 539 aa16.17■□□□□ 0.18
NUCB1-201ENST00000405315 PAFAH1B1P43034 410 aa16.17■□□□□ 0.18
NUCB1-201ENST00000405315 NAP1L1P55209 391 aaKnown RBP16.17■□□□□ 0.18
NUCB1-201ENST00000405315 SFMBT2Q5VUG0 894 aa16.17■□□□□ 0.18
NUCB1-201ENST00000405315 TMC4Q7Z404 712 aa16.17■□□□□ 0.18
NUCB1-201ENST00000405315 UIMC1Q96RL1 719 aa16.17■□□□□ 0.18
NUCB1-201ENST00000405315 KDM3AQ9Y4C1 1321 aa16.17■□□□□ 0.18
NUCB1-201ENST00000405315 F8W031 263 aaPredicted RBP16.16■□□□□ 0.18
NUCB1-201ENST00000405315 GTF2IP78347 998 aa16.16■□□□□ 0.18
NUCB1-201ENST00000405315 SLC9C1Q4G0N8 1177 aa16.16■□□□□ 0.18
NUCB1-201ENST00000405315 HAUS3Q68CZ6 603 aa16.16■□□□□ 0.18
NUCB1-201ENST00000405315 NELFCDQ8IXH7 590 aa16.16■□□□□ 0.18
NUCB1-201ENST00000405315 TLR10Q9BXR5 811 aa16.16■□□□□ 0.18
NUCB1-201ENST00000405315 TRIM34Q9BYJ4 488 aa16.16■□□□□ 0.18
NUCB1-201ENST00000405315 DDX4Q9NQI0 724 aaKnown RBP16.16■□□□□ 0.18
NUCB1-201ENST00000405315 BMP2KQ9NSY1 1161 aaPredicted RBP16.16■□□□□ 0.18
NUCB1-201ENST00000405315 PCDHA12Q9UN75 941 aa16.16■□□□□ 0.18
NUCB1-201ENST00000405315 NOL4O94818 638 aa16.16■□□□□ 0.18
NUCB1-201ENST00000405315 GCFC2P16383 781 aaKnown RBP16.16■□□□□ 0.18
NUCB1-201ENST00000405315 MRPL12P52815 198 aaKnown RBP16.16■□□□□ 0.18
NUCB1-201ENST00000405315 FAM83BQ5T0W9 1011 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms