RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 FCER1AP12319 257 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 ADD2P35612 726 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 CALCOCO2Q13137 446 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 PICALMQ13492 652 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 NFIXQ14938 502 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 SETDB1Q15047 1291 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 PTPAQ15257 358 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 SYCP3Q8IZU3 236 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 KAT2BQ92831 832 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 P2RX5Q93086 422 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 NBPF3Q9H094 633 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 LY9Q9HBG7 655 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 USP42Q9H9J4 1324 aaKnown RBP8.25□□□□□ -1.09
CDHR3-201ENST00000317716 COL15A1P39059 1388 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 NHSL1Q5SYE7 1610 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 PHRF1Q9P1Y6 1649 aaKnown RBP8.25□□□□□ -1.09
CDHR3-201ENST00000317716 SPDYE3A6NKU9 549 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 A6NNZ2 444 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 LGALS16A8MUM7 142 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 PDE2AO00408 941 aaPredicted RBP8.25□□□□□ -1.09
CDHR3-201ENST00000317716 SYF2O95926 243 aaKnown RBP8.25□□□□□ -1.09
CDHR3-201ENST00000317716 SLC15A2Q16348 729 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 TUBB8Q3ZCM7 444 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 ALS2CLQ60I27 953 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 KCNB2Q92953 911 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 ZBTB10Q96DT7 871 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 CRNKL1Q9BZJ0 848 aaKnown RBP8.25□□□□□ -1.09
CDHR3-201ENST00000317716 GPCPD1Q9NPB8 672 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 NKIRAS1Q9NYS0 192 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 RASAL2Q9UJF2 1139 aa8.25□□□□□ -1.09
CDHR3-201ENST00000317716 BCL9O00512 1426 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 SPOPO43791 374 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 MMEP08473 750 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 CALM1P0DP23 149 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 CALM2P0DP24 149 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 CALM3P0DP25 149 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 STX2P32856 288 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 ZNF211Q13398 564 aaPredicted RBP8.24□□□□□ -1.09
CDHR3-201ENST00000317716 PDIA6Q15084 440 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 MUM1Q2TAK8 710 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 NBPF9Q3BBW0 867 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 GSTA5Q7RTV2 222 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 CCDC84Q86UT8 332 aaPredicted RBP8.24□□□□□ -1.09
CDHR3-201ENST00000317716 HOOK3Q86VS8 718 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 LMNTD2Q8IXW0 634 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 BLIDQ8IZY5 108 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 TSEN2Q8NCE0 465 aaKnown RBP8.24□□□□□ -1.09
CDHR3-201ENST00000317716 IFT74Q96LB3 600 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 ALDH8A1Q9H2A2 487 aaPredicted RBP8.24□□□□□ -1.09
CDHR3-201ENST00000317716 LIMA1Q9UHB6 759 aaKnown RBP8.24□□□□□ -1.09
CDHR3-201ENST00000317716 SNX12Q9UMY4 172 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 SNX24Q9Y343 169 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 RNF225M0QZC1 329 aaPredicted RBP8.24□□□□□ -1.09
CDHR3-201ENST00000317716 DAPK3O43293 454 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 ACTN4O43707 911 aaKnown RBP8.24□□□□□ -1.09
CDHR3-201ENST00000317716 SCG2P13521 617 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 PLCG1P19174 1290 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 COPB2P35606 906 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 TFAP4Q01664 338 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 PLCB3Q01970 1234 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 TRIP13Q15645 432 aaPredicted RBP8.24□□□□□ -1.09
CDHR3-201ENST00000317716 TBC1D10BQ4KMP7 808 aaPredicted RBP8.24□□□□□ -1.09
CDHR3-201ENST00000317716 RETREG2Q8NC44 543 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 ZSCAN10Q96SZ4 725 aaPredicted RBP8.24□□□□□ -1.09
CDHR3-201ENST00000317716 IRAK4Q9NWZ3 460 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 CTTNBP2NLQ9P2B4 639 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 AMACRQ9UHK6 382 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 FBXL5Q9UKA1 691 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 L3MBTL1Q9Y468 752 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 UPP2O95045 317 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 MDH1P40925 334 aaKnown RBP8.24□□□□□ -1.09
CDHR3-201ENST00000317716 DIXDC1Q155Q3 683 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 EAPPQ56P03 285 aaPredicted RBP8.24□□□□□ -1.09
CDHR3-201ENST00000317716 NUGGCQ68CJ6 796 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.24□□□□□ -1.09
CDHR3-201ENST00000317716 SPATS2Q86XZ4 545 aaKnown RBP8.24□□□□□ -1.09
CDHR3-201ENST00000317716 ATP6V1G3Q96LB4 118 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 YY1AP1Q9H869 796 aa8.24□□□□□ -1.09
CDHR3-201ENST00000317716 TXNDC9O14530 226 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 OPLAHO14841 1288 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 EVI5O60447 810 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 FAM153BP0C7A2 387 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 EEF2P13639 858 aaKnown RBP8.23□□□□□ -1.09
CDHR3-201ENST00000317716 FAM153CQ494X1 144 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 NLRP10Q86W26 655 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 CYFIP2Q96F07 1278 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 EPN3Q9H201 632 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 NDST4Q9H3R1 872 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 KIF9Q9HAQ2 790 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 FAM153AQ9UHL3 310 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 ATP6V0A2Q9Y487 856 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 SHPRHQ149N8 1683 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 hCG_2014768A0A024R1R8 64 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 TBCAO75347 108 aaKnown RBP8.23□□□□□ -1.09
CDHR3-201ENST00000317716 ACSL3O95573 720 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 EEF1GP26641 437 aaKnown RBP8.23□□□□□ -1.09
CDHR3-201ENST00000317716 TOB1P50616 345 aaPredicted RBP8.23□□□□□ -1.09
CDHR3-201ENST00000317716 SNX1Q13596 522 aa8.23□□□□□ -1.09
CDHR3-201ENST00000317716 RBBP5Q15291 538 aaKnown RBP8.23□□□□□ -1.09
CDHR3-201ENST00000317716 PUM3Q15397 648 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms