RNA–Protein interactions for RNA: ENSMUST00000036690.6

Ptchd3-201, Transcript of Patched domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd3, Length 3,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3-201ENSMUST00000036690 Gdf10P97737 476 aa13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Kcnb1Q03717 857 aa13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Ssrp1Q08943 708 aaKnown RBP13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Tmtc1Q3UV71 942 aa13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Ddx49Q4FZF3 480 aaKnown RBP13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Kiaa1211Q5PR69 1207 aa13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Hirip3Q8BLH7 601 aa13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Arhgef19Q8BWA8 802 aa13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Slc13a4Q8BZ82 625 aa13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Prl7b1Q8CGZ9 251 aa13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Plekhg6Q8R0J1 787 aa13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Vps37cQ8R105 352 aa13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Eif4a3Q91VC3 411 aaKnown RBP13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Tmem192Q9CXT7 266 aa13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 TbcbQ9D1E6 244 aa13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Plcb1Q9Z1B3 1216 aa13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Vmn2r78K7N6U5 853 aa13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Hnrnph2P70333 449 aaKnown RBP13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Hdhd2Q3UGR5 259 aa13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Foxn3Q499D0 457 aa13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Mybpc2Q5XKE0 1136 aa13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Nell2Q61220 819 aa13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Cd37Q61470 281 aa13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Mcm7Q61881 719 aaKnown RBP13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 BbxQ8VBW5 907 aa13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Fam173bQ9D1Z3 247 aa13.16□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Ltbp2O08999 1813 aa13.15□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Gm1993A6X8I0 212 aa13.15□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 SlxD3Z347 212 aa13.15□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Hnrnph1O35737 449 aaKnown RBP13.15□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Sh3gl2Q62420 352 aa13.15□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Ushbp1Q8R370 680 aa13.15□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Cd248Q91V98 765 aa13.15□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Syce1Q9D495 329 aa13.15□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Nxnl2Q9D531 156 aa13.15□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Git2Q9JLQ2 708 aa13.15□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Prl2c5Q9JLV9 222 aa13.15□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Tnip1Q9WUU8 647 aa13.15□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Tal1P22091 329 aa13.15□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Vcam1P29533 739 aa13.15□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Qrich1Q3UA37 777 aa13.15□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Ddx3xQ62167 662 aaKnown RBP13.15□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Rassf10Q8BL43 508 aa13.15□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Morc2bQ8C5W4 1022 aa13.15□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Zbed3Q9D0L1 228 aa13.15□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Nlrp5Q9R1M5 1163 aa13.15□□□□□ -0.3
Ptchd3-201ENSMUST00000036690 Ankrd35E9Q9D8 996 aa13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Tcp1P11983 556 aaKnown RBP13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Nap1l2P51860 460 aa13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Ccdc172Q810N9 267 aa13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Ccdc186Q8C9S4 917 aa13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Pcdh11xF6ZNL5 1338 aa13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Ighmbp2P40694 993 aa13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 HmmrQ00547 794 aaKnown RBP13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Fbln1Q08879 705 aa13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Ccdc33Q3ULW6 985 aa13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Igf2bp2Q5SF07 592 aaKnown RBP13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Fnbp1Q80TY0 616 aa13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 RragaQ80X95 313 aa13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Calr3Q9D9Q6 380 aa13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Akr1b10G5E895 316 aa13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Mybl2P48972 704 aa13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Fam107bQ3TGF2 131 aa13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Tax1bp1Q3UKC1 814 aaKnown RBP13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Lrrc36Q3V0M2 755 aa13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Exoc3Q6KAR6 755 aa13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Fnbp4Q6ZQ03 1031 aa13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Q8BWG4 1187 aa13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Cacnb1Q8R3Z5 597 aa13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Pkd2l2Q9JLG4 621 aa13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Prkab1Q9R078 270 aa13.14□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Proca1B0QZF7 307 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Sema3fO88632 785 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Nedd4P46935 887 aaKnown RBP13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Lig3P97386 1015 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Hdgfl1Q2VPR5 283 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Slc2a13Q3UHK1 637 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Prom2Q3UUY6 835 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Nr1d1Q3UV55 615 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Akap4Q60662 849 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Ncapg2Q6DFV1 1138 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Lca5Q80ST9 704 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Slc9b1Q8C0X2 565 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Eif3hQ91WK2 352 aaKnown RBP13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Plagl2Q925T4 496 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Efhd1Q9D4J1 240 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Stat2Q9WVL2 923 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Mtmr9Q9Z2D0 545 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Sec14l1A8Y5H7 715 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Tcp10bE9PYJ0 438 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Dnajb6O54946 365 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Irx1P81068 480 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Znf697Q569E7 569 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Slc30a9Q5IRJ6 567 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Mettl25Q6NXH8 597 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Trim9Q8C7M3 817 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Calcoco1Q8CGU1 691 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Spata2Q8K004 515 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 BlmhQ8R016 455 aa13.13□□□□□ -0.31
Ptchd3-201ENSMUST00000036690 Ubxn6Q99PL6 442 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms