RNA–Protein interactions for RNA: ENSMUST00000036690.6

Ptchd3-201, Transcript of Patched domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd3, Length 3,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3-201ENSMUST00000036690 NischQ80TM9 1593 aa22.82■■□□□ 1.24
Ptchd3-201ENSMUST00000036690 Gm35339A0A140LHH9 1649 aa22.14■■□□□ 1.13
Ptchd3-201ENSMUST00000036690 Abcc9P70170 1546 aa22.01■■□□□ 1.11
Ptchd3-201ENSMUST00000036690 Abcc8B2RUS7 1588 aa21.62■■□□□ 1.05
Ptchd3-201ENSMUST00000036690 Rhox8Q6VSS7 320 aa21.58■■□□□ 1.05
Ptchd3-201ENSMUST00000036690 Rtl1Q7M732 1744 aa20.37■□□□□ 0.85
Ptchd3-201ENSMUST00000036690 ScribQ80U72 1612 aa20.25■□□□□ 0.83
Ptchd3-201ENSMUST00000036690 Ccdc180J3QNE4 1664 aa20.17■□□□□ 0.82
Ptchd3-201ENSMUST00000036690 Rpgrip1Q9EPQ2 1331 aa20.06■□□□□ 0.8
Ptchd3-201ENSMUST00000036690 Ccdc136Q3TVA9 1136 aa20.04■□□□□ 0.8
Ptchd3-201ENSMUST00000036690 Rb1cc1Q9ESK9 1588 aa20■□□□□ 0.79
Ptchd3-201ENSMUST00000036690 Kdm5dQ62240 1548 aa19.91■□□□□ 0.78
Ptchd3-201ENSMUST00000036690 Dcaf1Q80TR8 1506 aa19.9■□□□□ 0.78
Ptchd3-201ENSMUST00000036690 NacadQ5SWP3 1504 aa19.72■□□□□ 0.75
Ptchd3-201ENSMUST00000036690 Zcchc6Q5BLK4 1491 aaKnown RBP19.72■□□□□ 0.75
Ptchd3-201ENSMUST00000036690 Baz1aO88379 1555 aa19.66■□□□□ 0.74
Ptchd3-201ENSMUST00000036690 Acin1Q9JIX8 1338 aaKnown RBP19.61■□□□□ 0.73
Ptchd3-201ENSMUST00000036690 Ehmt2Q9Z148 1263 aaKnown RBP19.48■□□□□ 0.71
Ptchd3-201ENSMUST00000036690 Trim41Q5NCC3 630 aa19.34■□□□□ 0.69
Ptchd3-201ENSMUST00000036690 Sycp2Q9CUU3 1500 aa19.29■□□□□ 0.68
Ptchd3-201ENSMUST00000036690 HrcG5E8J6 738 aa19.23■□□□□ 0.67
Ptchd3-201ENSMUST00000036690 Cngb1E1AZ71 1325 aa19.17■□□□□ 0.66
Ptchd3-201ENSMUST00000036690 Smarca2Q6DIC0 1577 aa19.16■□□□□ 0.66
Ptchd3-201ENSMUST00000036690 Crybg2B7ZCC2 1516 aa19.13■□□□□ 0.65
Ptchd3-201ENSMUST00000036690 Pcgf6Q99NA9 353 aa19.12■□□□□ 0.65
Ptchd3-201ENSMUST00000036690 Cecr2E9Q2Z1 1453 aa18.98■□□□□ 0.63
Ptchd3-201ENSMUST00000036690 Esf1Q3V1V3 845 aaKnown RBP18.98■□□□□ 0.63
Ptchd3-201ENSMUST00000036690 Gab3Q8BSM5 595 aa18.93■□□□□ 0.62
Ptchd3-201ENSMUST00000036690 BicraF8VPZ9 1578 aa18.89■□□□□ 0.62
Ptchd3-201ENSMUST00000036690 Brd4Q9ESU6 1400 aaKnown RBP18.86■□□□□ 0.61
Ptchd3-201ENSMUST00000036690 Chic1Q8CBW7 227 aa18.83■□□□□ 0.61
Ptchd3-201ENSMUST00000036690 Synj1Q8CHC4 1574 aa18.72■□□□□ 0.59
Ptchd3-201ENSMUST00000036690 Cep164Q5DU05 1446 aa18.71■□□□□ 0.59
Ptchd3-201ENSMUST00000036690 Supt5hO55201 1082 aaKnown RBP18.71■□□□□ 0.58
Ptchd3-201ENSMUST00000036690 Rsf1E9PWW9 1441 aaKnown RBP18.68■□□□□ 0.58
Ptchd3-201ENSMUST00000036690 Golga3P55937 1487 aa18.61■□□□□ 0.57
Ptchd3-201ENSMUST00000036690 Ccdc88bQ4QRL3 1481 aa18.6■□□□□ 0.57
Ptchd3-201ENSMUST00000036690 CftrP26361 1476 aa18.59■□□□□ 0.57
Ptchd3-201ENSMUST00000036690 Smarca4Q3TKT4 1613 aaKnown RBP18.45■□□□□ 0.54
Ptchd3-201ENSMUST00000036690 Neurod1Q60867 357 aa18.41■□□□□ 0.54
Ptchd3-201ENSMUST00000036690 Cttnbp2B9EJA2 1648 aa18.41■□□□□ 0.54
Ptchd3-201ENSMUST00000036690 Zeb1Q64318 1117 aa18.36■□□□□ 0.53
Ptchd3-201ENSMUST00000036690 Myt1lP97500 1187 aa18.31■□□□□ 0.52
Ptchd3-201ENSMUST00000036690 Iqgap2Q3UQ44 1575 aa18.27■□□□□ 0.52
Ptchd3-201ENSMUST00000036690 Cc2d2aQ8CFW7 1633 aa18.27■□□□□ 0.52
Ptchd3-201ENSMUST00000036690 Top2bQ64511 1612 aa18.24■□□□□ 0.51
Ptchd3-201ENSMUST00000036690 Npm2Q80W85 207 aa18.23■□□□□ 0.51
Ptchd3-201ENSMUST00000036690 Il27Q8K3I6 234 aa18.2■□□□□ 0.5
Ptchd3-201ENSMUST00000036690 NefmP08553 848 aa18.19■□□□□ 0.5
Ptchd3-201ENSMUST00000036690 Atad2bE9Q166 1460 aaKnown RBP18.18■□□□□ 0.5
Ptchd3-201ENSMUST00000036690 Pds5bQ4VA53 1446 aaKnown RBP18.15■□□□□ 0.5
Ptchd3-201ENSMUST00000036690 Mier1Q5UAK0 511 aa18.14■□□□□ 0.49
Ptchd3-201ENSMUST00000036690 Fmn1Q05860 1466 aa18.1■□□□□ 0.49
Ptchd3-201ENSMUST00000036690 Las1lA2BE28 776 aaKnown RBP18.1■□□□□ 0.49
Ptchd3-201ENSMUST00000036690 Sall2Q9QX96 1004 aa18.1■□□□□ 0.49
Ptchd3-201ENSMUST00000036690 UbtfP25976 765 aaKnown RBP18.05■□□□□ 0.48
Ptchd3-201ENSMUST00000036690 Frmpd1A2AKB4 1549 aa17.95■□□□□ 0.46
Ptchd3-201ENSMUST00000036690 Top2aQ01320 1528 aaKnown RBP17.94■□□□□ 0.46
Ptchd3-201ENSMUST00000036690 Kif15Q6P9L6 1387 aa17.93■□□□□ 0.46
Ptchd3-201ENSMUST00000036690 Rapgef2Q8CHG7 1496 aa17.93■□□□□ 0.46
Ptchd3-201ENSMUST00000036690 Ercc6F8VPZ5 1481 aa17.92■□□□□ 0.46
Ptchd3-201ENSMUST00000036690 Cep162Q6ZQ06 1403 aa17.88■□□□□ 0.45
Ptchd3-201ENSMUST00000036690 Anks4bQ8K3X6 423 aa17.87■□□□□ 0.45
Ptchd3-201ENSMUST00000036690 Wdr62Q3U3T8 1523 aa17.86■□□□□ 0.45
Ptchd3-201ENSMUST00000036690 Ap3b1Q9Z1T1 1105 aa17.84■□□□□ 0.45
Ptchd3-201ENSMUST00000036690 Plekhg3Q4VAC9 1341 aa17.84■□□□□ 0.45
Ptchd3-201ENSMUST00000036690 Wdr66E9Q743 1299 aa17.83■□□□□ 0.45
Ptchd3-201ENSMUST00000036690 1700123L14RikQ3V2K7 440 aa17.83■□□□□ 0.45
Ptchd3-201ENSMUST00000036690 Csrnp3P59055 597 aa17.82■□□□□ 0.44
Ptchd3-201ENSMUST00000036690 Ubl4bQ9CQ84 188 aa17.79■□□□□ 0.44
Ptchd3-201ENSMUST00000036690 Clip1Q922J3 1391 aa17.75■□□□□ 0.43
Ptchd3-201ENSMUST00000036690 Aebp2Q9Z248 504 aaKnown RBP17.75■□□□□ 0.43
Ptchd3-201ENSMUST00000036690 PtprkP35822 1457 aa17.71■□□□□ 0.43
Ptchd3-201ENSMUST00000036690 Npm1Q61937 292 aaKnown RBP17.71■□□□□ 0.42
Ptchd3-201ENSMUST00000036690 TnnQ80Z71 1560 aa17.67■□□□□ 0.42
Ptchd3-201ENSMUST00000036690 Cdk11bP24788 784 aaKnown RBP17.67■□□□□ 0.42
Ptchd3-201ENSMUST00000036690 Lamc3Q9R0B6 1581 aa17.65■□□□□ 0.42
Ptchd3-201ENSMUST00000036690 Nop58Q6DFW4 536 aaKnown RBP17.64■□□□□ 0.41
Ptchd3-201ENSMUST00000036690 Unc13aQ4KUS2 1712 aa17.64■□□□□ 0.41
Ptchd3-201ENSMUST00000036690 Ppargc1bQ8VHJ7 1014 aa17.64■□□□□ 0.41
Ptchd3-201ENSMUST00000036690 Ccdc18Q640L5 1455 aa17.62■□□□□ 0.41
Ptchd3-201ENSMUST00000036690 ClspnQ80YR7 1315 aa17.62■□□□□ 0.41
Ptchd3-201ENSMUST00000036690 Phldb1Q6PDH0 1371 aaKnown RBP17.61■□□□□ 0.41
Ptchd3-201ENSMUST00000036690 Cux2P70298 1426 aa17.6■□□□□ 0.41
Ptchd3-201ENSMUST00000036690 Arhgap35Q91YM2 1499 aa17.58■□□□□ 0.41
Ptchd3-201ENSMUST00000036690 Camsap1A2AHC3 1581 aa17.57■□□□□ 0.4
Ptchd3-201ENSMUST00000036690 Setd5Q5XJV7 1441 aa17.53■□□□□ 0.4
Ptchd3-201ENSMUST00000036690 Aplp2Q06335 707 aa17.51■□□□□ 0.39
Ptchd3-201ENSMUST00000036690 Shroom4Q1W617 1475 aa17.51■□□□□ 0.39
Ptchd3-201ENSMUST00000036690 Eea1Q8BL66 1411 aa17.48■□□□□ 0.39
Ptchd3-201ENSMUST00000036690 Baz1bQ9Z277 1479 aa17.48■□□□□ 0.39
Ptchd3-201ENSMUST00000036690 Lmod2Q3UHZ5 550 aa17.48■□□□□ 0.39
Ptchd3-201ENSMUST00000036690 Grin2bQ01097 1482 aa17.47■□□□□ 0.39
Ptchd3-201ENSMUST00000036690 NrkQ9R0G8 1455 aa17.47■□□□□ 0.39
Ptchd3-201ENSMUST00000036690 TonslQ6NZL6 1363 aa17.46■□□□□ 0.39
Ptchd3-201ENSMUST00000036690 Eif4g1Q6NZJ6 1600 aaKnown RBP17.46■□□□□ 0.38
Ptchd3-201ENSMUST00000036690 Thoc2B1AZI6 1594 aaKnown RBP17.45■□□□□ 0.38
Ptchd3-201ENSMUST00000036690 CenpbP27790 599 aa17.44■□□□□ 0.38
Ptchd3-201ENSMUST00000036690 Gm38655A0A286YDK6 273 aa17.42■□□□□ 0.38
Ptchd3-201ENSMUST00000036690 Arap1Q4LDD4 1452 aa17.4■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 9.6 ms