Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Gm25239-201ENSMUST00000174915 86 ntBASIC41.2■■■■■ 4.19
Cacnb1Q8R3Z5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.92■■■■□ 3.66
Cacnb1Q8R3Z5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.82■■■■□ 3.65
Cacnb1Q8R3Z5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
Cacnb1Q8R3Z5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
Cacnb1Q8R3Z5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.48■■■■□ 3.43
Cacnb1Q8R3Z5 Gm15042-201ENSMUST00000120212 883 ntBASIC36.39■■■■□ 3.42
Cacnb1Q8R3Z5 Gm15045-201ENSMUST00000117359 883 ntBASIC35.69■■■■□ 3.3
Cacnb1Q8R3Z5 Gm24109-201ENSMUST00000175489 103 ntBASIC35.54■■■■□ 3.28
Cacnb1Q8R3Z5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Cacnb1Q8R3Z5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
Cacnb1Q8R3Z5 Psd-208ENSMUST00000224556 2034 ntBASIC35.06■■■■□ 3.2
Cacnb1Q8R3Z5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.71■■■■□ 3.15
Cacnb1Q8R3Z5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.69■■■■□ 3.14
Cacnb1Q8R3Z5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.58■■■■□ 3.13
Cacnb1Q8R3Z5 Gm23366-201ENSMUST00000175022 89 ntBASIC34.41■■■■□ 3.1
Cacnb1Q8R3Z5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Cacnb1Q8R3Z5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
Cacnb1Q8R3Z5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Cacnb1Q8R3Z5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.17■■■■□ 3.06
Cacnb1Q8R3Z5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Cacnb1Q8R3Z5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.08■■■■□ 3.05
Cacnb1Q8R3Z5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.99■■■■□ 3.03
Cacnb1Q8R3Z5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.93■■■■□ 3.02
Cacnb1Q8R3Z5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
Cacnb1Q8R3Z5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
Cacnb1Q8R3Z5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.77■■■■□ 3
Cacnb1Q8R3Z5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
Cacnb1Q8R3Z5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Cacnb1Q8R3Z5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Cacnb1Q8R3Z5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.46■■■□□ 2.95
Cacnb1Q8R3Z5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Cacnb1Q8R3Z5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.43■■■□□ 2.94
Cacnb1Q8R3Z5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.33■■■□□ 2.93
Cacnb1Q8R3Z5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.31■■■□□ 2.92
Cacnb1Q8R3Z5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Cacnb1Q8R3Z5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Cacnb1Q8R3Z5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
Cacnb1Q8R3Z5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.86
Cacnb1Q8R3Z5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.92■■■□□ 2.86
Cacnb1Q8R3Z5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Cacnb1Q8R3Z5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.66■■■□□ 2.82
Cacnb1Q8R3Z5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.54■■■□□ 2.8
Cacnb1Q8R3Z5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
Cacnb1Q8R3Z5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.53■■■□□ 2.8
Cacnb1Q8R3Z5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Cacnb1Q8R3Z5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Cacnb1Q8R3Z5 Gm25238-201ENSMUST00000174914 89 ntBASIC32.41■■■□□ 2.78
Cacnb1Q8R3Z5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Cacnb1Q8R3Z5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Cacnb1Q8R3Z5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Cacnb1Q8R3Z5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Cacnb1Q8R3Z5 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.25■■■□□ 2.75
Cacnb1Q8R3Z5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.22■■■□□ 2.75
Cacnb1Q8R3Z5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Cacnb1Q8R3Z5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Cacnb1Q8R3Z5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Cacnb1Q8R3Z5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Cacnb1Q8R3Z5 Gm27325-201ENSMUST00000175467 74 ntBASIC31.95■■■□□ 2.71
Cacnb1Q8R3Z5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
Cacnb1Q8R3Z5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Cacnb1Q8R3Z5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Cacnb1Q8R3Z5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.84■■■□□ 2.69
Cacnb1Q8R3Z5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.82■■■□□ 2.68
Cacnb1Q8R3Z5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.81■■■□□ 2.68
Cacnb1Q8R3Z5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Cacnb1Q8R3Z5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Cacnb1Q8R3Z5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.74■■■□□ 2.67
Cacnb1Q8R3Z5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
Cacnb1Q8R3Z5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
Cacnb1Q8R3Z5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.68■■■□□ 2.66
Cacnb1Q8R3Z5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Cacnb1Q8R3Z5 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.67■■■□□ 2.66
Cacnb1Q8R3Z5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Cacnb1Q8R3Z5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Cacnb1Q8R3Z5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Cacnb1Q8R3Z5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Cacnb1Q8R3Z5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Cacnb1Q8R3Z5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Cacnb1Q8R3Z5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.38■■■□□ 2.61
Cacnb1Q8R3Z5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.36■■■□□ 2.61
Cacnb1Q8R3Z5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.33■■■□□ 2.61
Cacnb1Q8R3Z5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Cacnb1Q8R3Z5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Cacnb1Q8R3Z5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.2■■■□□ 2.59
Cacnb1Q8R3Z5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Cacnb1Q8R3Z5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
Cacnb1Q8R3Z5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
Cacnb1Q8R3Z5 Rab21-202ENSMUST00000218831 843 ntBASIC31.07■■■□□ 2.56
Cacnb1Q8R3Z5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Cacnb1Q8R3Z5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Cacnb1Q8R3Z5 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Cacnb1Q8R3Z5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Cacnb1Q8R3Z5 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Cacnb1Q8R3Z5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.91■■■□□ 2.54
Cacnb1Q8R3Z5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.89■■■□□ 2.54
Cacnb1Q8R3Z5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Cacnb1Q8R3Z5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.84■■■□□ 2.53
Cacnb1Q8R3Z5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
Cacnb1Q8R3Z5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms