RNA–Protein interactions for RNA: snR19

snR19, Transcript of U1 spliceosomal RNA (U1 snRNA), yeast

Gene snR19, Length 568 nt, Biotype snRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR19	snR19	LSB1	P53281	241 aa		4.76	□□□□□ -1.65
snR19	snR19	RBG2	P53295	368 aa	Known RBP	4.76	□□□□□ -1.65
snR19	snR19	BOP3	P53958	396 aa		4.76	□□□□□ -1.65
snR19	snR19	GTR1	Q00582	310 aa		4.76	□□□□□ -1.65
snR19	snR19	RPT6	Q01939	405 aa	Known RBP	4.76	□□□□□ -1.65
snR19	snR19	CWC21	Q03375	135 aa	Known RBP	4.76	□□□□□ -1.65
snR19	snR19	NSE1	Q07913	336 aa		4.76	□□□□□ -1.65
snR19	snR19	UIP4	Q08926	304 aa		4.76	□□□□□ -1.65
snR19	snR19	YPL191C	Q08930	360 aa		4.76	□□□□□ -1.65
snR19	snR19	PNO1	Q99216	274 aa	Known RBP	4.76	□□□□□ -1.65
snR19	snR19	RAD1	P06777	1100 aa		4.75	□□□□□ -1.65
snR19	snR19	DPB2	P24482	689 aa	Predicted RBP	4.75	□□□□□ -1.65
snR19	snR19	RPC53	P25441	422 aa		4.75	□□□□□ -1.65
snR19	snR19	SPB1	P25582	841 aa	Predicted RBP	4.75	□□□□□ -1.65
snR19	snR19	SMI1	P32566	505 aa		4.75	□□□□□ -1.65
snR19	snR19	CSE2	P33308	149 aa		4.75	□□□□□ -1.65
snR19	snR19	PXA2	P34230	853 aa		4.75	□□□□□ -1.65
snR19	snR19	VPS51	P36116	164 aa		4.75	□□□□□ -1.65
snR19	snR19	TVP38	P36164	337 aa		4.75	□□□□□ -1.65
snR19	snR19	FUI1	P38196	639 aa		4.75	□□□□□ -1.65
snR19	snR19	VBA2	P38358	474 aa	Known RBP	4.75	□□□□□ -1.65
snR19	snR19	SER3	P40054	469 aa		4.75	□□□□□ -1.65
snR19	snR19	YER186C	P40101	306 aa		4.75	□□□□□ -1.65
snR19	snR19	SNZ3	P43545	298 aa		4.75	□□□□□ -1.65
snR19	snR19	YGR021W	P53212	290 aa		4.75	□□□□□ -1.65
snR19	snR19	SNZ2	P53824	298 aa		4.75	□□□□□ -1.65
snR19	snR19	VPS75	P53853	264 aa		4.75	□□□□□ -1.65
snR19	snR19	YNL144C	P53907	740 aa		4.75	□□□□□ -1.65
snR19	snR19	AAT1	Q01802	451 aa		4.75	□□□□□ -1.65
snR19	snR19	MRPL13	Q02204	264 aa		4.75	□□□□□ -1.65
snR19	snR19	GTB1	Q04924	702 aa		4.75	□□□□□ -1.65
snR19	snR19	BSP1	Q06604	576 aa		4.75	□□□□□ -1.65
snR19	snR19	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
snR19	snR19	PSR2	Q07949	397 aa		4.75	□□□□□ -1.65
snR19	snR19	MLH2	Q07980	695 aa		4.75	□□□□□ -1.65
snR19	snR19	APL4	Q12028	832 aa		4.75	□□□□□ -1.65
snR19	snR19	SEY1	Q99287	776 aa		4.75	□□□□□ -1.65
snR19	snR19	MSB2	P32334	1306 aa		4.74	□□□□□ -1.65
snR19	snR19	LAA1	P39526	2014 aa		4.74	□□□□□ -1.65
snR19	snR19	BI2	P03873	423 aa		4.74	□□□□□ -1.65
snR19	snR19	ILS1	P09436	1072 aa	Known RBP	4.74	□□□□□ -1.65
snR19	snR19	MTF2	P10849	440 aa		4.74	□□□□□ -1.65
snR19	snR19	RAP1	P11938	827 aa		4.74	□□□□□ -1.65
snR19	snR19	STF2	P16965	84 aa		4.74	□□□□□ -1.65
snR19	snR19	NUP1	P20676	1076 aa		4.74	□□□□□ -1.65
snR19	snR19	SGF29	P25554	259 aa		4.74	□□□□□ -1.65
snR19	snR19	MEI4	P29467	408 aa		4.74	□□□□□ -1.65
snR19	snR19	YPT53	P36019	220 aa		4.74	□□□□□ -1.65
snR19	snR19	UBP11	P36026	717 aa		4.74	□□□□□ -1.65
snR19	snR19	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
snR19	snR19	SPP381	P38282	291 aa	Predicted RBP	4.74	□□□□□ -1.65
snR19	snR19	YHL026C	P38740	315 aa		4.74	□□□□□ -1.65
snR19	snR19	RRF1	P38771	230 aa		4.74	□□□□□ -1.65
snR19	snR19	VMA22	P38784	181 aa		4.74	□□□□□ -1.65
snR19	snR19	CCT6	P39079	546 aa		4.74	□□□□□ -1.65
snR19	snR19	RPH1	P39956	796 aa		4.74	□□□□□ -1.65
snR19	snR19	JLP2	P40206	208 aa		4.74	□□□□□ -1.65
snR19	snR19	IMD3	P50095	523 aa	Known RBP	4.74	□□□□□ -1.65
snR19	snR19	YGR079W	P53249	370 aa		4.74	□□□□□ -1.65
snR19	snR19	ATP23	P53722	227 aa		4.74	□□□□□ -1.65
snR19	snR19	SRL4	Q03085	281 aa		4.74	□□□□□ -1.65
snR19	snR19	MTG1	Q03151	367 aa	Predicted RBP	4.74	□□□□□ -1.65
snR19	snR19	SEG1	Q04279	960 aa		4.74	□□□□□ -1.65
snR19	snR19	RNH1	Q04740	348 aa		4.74	□□□□□ -1.65
snR19	snR19	SEC10	Q06245	871 aa		4.74	□□□□□ -1.65
snR19	snR19	RAD34	Q06665	692 aa		4.74	□□□□□ -1.65
snR19	snR19	DIS3	Q08162	1001 aa	Known RBP	4.74	□□□□□ -1.65
snR19	snR19	TAF10	Q12030	206 aa		4.74	□□□□□ -1.65
snR19	snR19	YLR111W	Q12528	110 aa		4.74	□□□□□ -1.65
snR19	snR19	MEX67	Q99257	599 aa	Known RBP	4.74	□□□□□ -1.65
snR19	snR19	ADE4	P04046	510 aa	Known RBP	4.73	□□□□□ -1.65
snR19	snR19	RPS14A	P06367	137 aa	Known RBP	4.73	□□□□□ -1.65
snR19	snR19	RPL19A	P0CX82	189 aa	Known RBP	4.73	□□□□□ -1.65
snR19	snR19	RPL19B	P0CX83	189 aa	Predicted RBP	4.73	□□□□□ -1.65
snR19	snR19	PHO13	P19881	312 aa		4.73	□□□□□ -1.65
snR19	snR19	ISY1	P21374	235 aa	Predicted RBP	4.73	□□□□□ -1.65
snR19	snR19	CLB2	P24869	491 aa		4.73	□□□□□ -1.65
snR19	snR19	SIN4	P32259	974 aa		4.73	□□□□□ -1.65
snR19	snR19	PRX1	P34227	261 aa	Known RBP	4.73	□□□□□ -1.65
snR19	snR19	JNM1	P36224	373 aa		4.73	□□□□□ -1.65
snR19	snR19	MRPL36	P36531	177 aa		4.73	□□□□□ -1.65
snR19	snR19	MAL33	P38157	468 aa		4.73	□□□□□ -1.65
snR19	snR19	YBR225W	P38321	900 aa		4.73	□□□□□ -1.65
snR19	snR19	LSM12	P38828	187 aa	Known RBP	4.73	□□□□□ -1.65
snR19	snR19	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
snR19	snR19	SMC2	P38989	1170 aa	Known RBP	4.73	□□□□□ -1.65
snR19	snR19	PCF11	P39081	626 aa	Predicted RBP	4.73	□□□□□ -1.65
snR19	snR19	RPS14B	P39516	138 aa	Known RBP	4.73	□□□□□ -1.65
snR19	snR19	YER137C	P40083	148 aa	Known RBP	4.73	□□□□□ -1.65
snR19	snR19	YPT11	P48559	417 aa		4.73	□□□□□ -1.65
snR19	snR19	MIG2	P53035	382 aa		4.73	□□□□□ -1.65
snR19	snR19	MRM2	P53123	320 aa		4.73	□□□□□ -1.65
snR19	snR19	YAT1	P80235	687 aa		4.73	□□□□□ -1.65
snR19	snR19	TAF12	Q03761	539 aa		4.73	□□□□□ -1.65
snR19	snR19	RIM13	Q03792	727 aa		4.73	□□□□□ -1.65
snR19	snR19	MYO5	Q04439	1219 aa	Known RBP	4.73	□□□□□ -1.65
snR19	snR19	ADE13	Q05911	482 aa	Known RBP	4.73	□□□□□ -1.65
snR19	snR19	DBP9	Q06218	594 aa	Known RBP	4.73	□□□□□ -1.65
snR19	snR19	FRE7	Q12333	620 aa		4.73	□□□□□ -1.65
snR19	snR19	COX1	P00401	534 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 12 ms