RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W HEF3P53978 1044 aaKnown RBP1.69□□□□□ -2.14
YOP1YPR028W PDS5Q04264 1277 aa1.69□□□□□ -2.14
YOP1YPR028W MRD1Q06106 887 aaKnown RBP1.69□□□□□ -2.14
YOP1YPR028W VPS74Q06385 345 aa1.69□□□□□ -2.14
YOP1YPR028W KEL3Q08979 651 aaPredicted RBP1.69□□□□□ -2.14
YOP1YPR028W RIM20Q12033 661 aa1.69□□□□□ -2.14
YOP1YPR028W RKM5Q12367 367 aa1.69□□□□□ -2.14
YOP1YPR028W YDL012CQ12489 107 aa1.69□□□□□ -2.14
YOP1YPR028W YDL007C-AQ2V2Q0 85 aa1.69□□□□□ -2.14
YOP1YPR028W RAV1P47104 1357 aa1.69□□□□□ -2.14
YOP1YPR028W MET17P06106 444 aa1.68□□□□□ -2.14
YOP1YPR028W COR1P07256 457 aa1.68□□□□□ -2.14
YOP1YPR028W LPD1P09624 499 aaKnown RBP1.68□□□□□ -2.14
YOP1YPR028W RPL31BP0C2H9 113 aaKnown RBP1.68□□□□□ -2.14
YOP1YPR028W ROX1P25042 368 aa1.68□□□□□ -2.14
YOP1YPR028W NAM9P27929 486 aa1.68□□□□□ -2.14
YOP1YPR028W FUN19P28003 413 aaPredicted RBP1.68□□□□□ -2.14
YOP1YPR028W SPR1P32603 445 aa1.68□□□□□ -2.14
YOP1YPR028W PAD1P33751 242 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
YOP1YPR028W SEC66P33754 206 aa1.68□□□□□ -2.14
YOP1YPR028W PMT1P33775 817 aa1.68□□□□□ -2.14
YOP1YPR028W YBL059WP34224 193 aa1.68□□□□□ -2.14
YOP1YPR028W YMR147WP40218 223 aaKnown RBP1.68□□□□□ -2.14
YOP1YPR028W GCD10P41814 478 aa1.68□□□□□ -2.14
YOP1YPR028W URB2P47108 1174 aa1.68□□□□□ -2.14
YOP1YPR028W ZPR1P53303 486 aaKnown RBP1.68□□□□□ -2.14
YOP1YPR028W RQC1Q05468 723 aaKnown RBP1.68□□□□□ -2.14
YOP1YPR028W RBS1Q05672 457 aaKnown RBP1.68□□□□□ -2.14
YOP1YPR028W YLR287CQ05881 355 aa1.68□□□□□ -2.14
YOP1YPR028W YML133CQ03099 1374 aa1.68□□□□□ -2.14
YOP1YPR028W YLL067CQ07888 1374 aa1.68□□□□□ -2.14
YOP1YPR028W YLL066CQ99208 1374 aa1.68□□□□□ -2.14
YOP1YPR028W MES1P00958 751 aaKnown RBP1.67□□□□□ -2.14
YOP1YPR028W CHS1P08004 1131 aa1.67□□□□□ -2.14
YOP1YPR028W RED1P14291 827 aa1.67□□□□□ -2.14
YOP1YPR028W BUB3P26449 341 aa1.67□□□□□ -2.14
YOP1YPR028W ATP11P32453 318 aa1.67□□□□□ -2.14
YOP1YPR028W MFT1P33441 392 aaKnown RBP1.67□□□□□ -2.14
YOP1YPR028W CBP4P37267 147 aa1.67□□□□□ -2.14
YOP1YPR028W SMF1P38925 575 aa1.67□□□□□ -2.14
YOP1YPR028W FAU1P40099 211 aa1.67□□□□□ -2.14
YOP1YPR028W POP1P41812 875 aa1.67□□□□□ -2.14
YOP1YPR028W HXT14P42833 540 aa1.67□□□□□ -2.14
YOP1YPR028W ELP2P42935 788 aa1.67□□□□□ -2.14
YOP1YPR028W YGR210CP42942 411 aa1.67□□□□□ -2.14
YOP1YPR028W RRT5P43607 289 aa1.67□□□□□ -2.14
YOP1YPR028W ART5P53244 586 aaKnown RBP1.67□□□□□ -2.14
YOP1YPR028W YLR152CP54072 576 aa1.67□□□□□ -2.14
YOP1YPR028W SLG1P54867 378 aa1.67□□□□□ -2.14
YOP1YPR028W TAF11Q04226 346 aa1.67□□□□□ -2.14
YOP1YPR028W VTA1Q06263 330 aa1.67□□□□□ -2.14
YOP1YPR028W SCM3Q12334 223 aa1.67□□□□□ -2.14
YOP1YPR028W SFI1Q12369 946 aa1.67□□□□□ -2.14
YOP1YPR028W GRX6Q12438 231 aa1.67□□□□□ -2.14
YOP1YPR028W LEU4P06208 619 aaKnown RBP1.66□□□□□ -2.14
YOP1YPR028W HIP1P06775 603 aa1.66□□□□□ -2.14
YOP1YPR028W RHO2P06781 192 aa1.66□□□□□ -2.14
YOP1YPR028W CLC1P17891 233 aa1.66□□□□□ -2.14
YOP1YPR028W SPB1P25582 841 aaPredicted RBP1.66□□□□□ -2.14
YOP1YPR028W RAD14P28519 371 aa1.66□□□□□ -2.14
YOP1YPR028W YIM1P28625 365 aa1.66□□□□□ -2.14
YOP1YPR028W ERG3P32353 365 aa1.66□□□□□ -2.14
YOP1YPR028W GYP6P32806 458 aa1.66□□□□□ -2.14
YOP1YPR028W NPL6P32832 435 aa1.66□□□□□ -2.14
YOP1YPR028W REC114P32841 428 aa1.66□□□□□ -2.14
YOP1YPR028W NOC2P39744 710 aaKnown RBP1.66□□□□□ -2.14
YOP1YPR028W SYG1P40528 902 aa1.66□□□□□ -2.14
YOP1YPR028W OCA1P50946 238 aaPredicted RBP1.66□□□□□ -2.14
YOP1YPR028W YGL108CP53139 140 aa1.66□□□□□ -2.14
YOP1YPR028W RMD9P53140 646 aaKnown RBP1.66□□□□□ -2.14
YOP1YPR028W RNY1Q02933 434 aaKnown RBP1.66□□□□□ -2.14
YOP1YPR028W PIR3Q03180 325 aa1.66□□□□□ -2.14
YOP1YPR028W GIR2Q03768 265 aaPredicted RBP1.66□□□□□ -2.14
YOP1YPR028W SPC19Q03954 165 aa1.66□□□□□ -2.14
YOP1YPR028W SYF1Q04048 859 aaPredicted RBP1.66□□□□□ -2.14
YOP1YPR028W TMS1Q12116 473 aa1.66□□□□□ -2.14
YOP1YPR028W ERV2Q12284 196 aa1.66□□□□□ -2.14
YOP1YPR028W RTN2Q12443 393 aa1.66□□□□□ -2.14
YOP1YPR028W RRD2Q12461 358 aa1.66□□□□□ -2.14
YOP1YPR028W SPS4P09937 338 aa1.65□□□□□ -2.15
YOP1YPR028W CPR1P14832 162 aaKnown RBP1.65□□□□□ -2.15
YOP1YPR028W CLB3P24870 427 aa1.65□□□□□ -2.15
YOP1YPR028W AFG1P32317 509 aa1.65□□□□□ -2.15
YOP1YPR028W MRP4P32902 394 aa1.65□□□□□ -2.15
YOP1YPR028W FRE2P36033 711 aa1.65□□□□□ -2.15
YOP1YPR028W RSM22P36056 628 aa1.65□□□□□ -2.15
YOP1YPR028W YIL067CP40514 678 aa1.65□□□□□ -2.15
YOP1YPR028W YGR149WP48236 432 aa1.65□□□□□ -2.15
YOP1YPR028W AVT4P50944 713 aa1.65□□□□□ -2.15
YOP1YPR028W MNP1P53163 194 aaPredicted RBP1.65□□□□□ -2.15
YOP1YPR028W TAP42Q04372 366 aa1.65□□□□□ -2.15
YOP1YPR028W SOV1Q04748 898 aa1.65□□□□□ -2.15
YOP1YPR028W RRG7Q08774 242 aaPredicted RBP1.65□□□□□ -2.15
YOP1YPR028W FAB1P34756 2278 aa1.65□□□□□ -2.15
YOP1YPR028W SUP35P05453 685 aaKnown RBP1.64□□□□□ -2.15
YOP1YPR028W GPH1P06738 902 aaKnown RBP1.64□□□□□ -2.15
YOP1YPR028W RPL3P14126 387 aaKnown RBP1.64□□□□□ -2.15
YOP1YPR028W HEM15P16622 393 aa1.64□□□□□ -2.15
YOP1YPR028W ATP10P18496 279 aa1.64□□□□□ -2.15
YOP1YPR028W FUR1P18562 216 aaKnown RBP1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms