RNA–Protein interactions for RNA: YPL193W

RSA1, Transcript of Protein involved in the assembly of 60S ribosomal subunits, yeast

Gene RSA1, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA1	YPL193W	RRP12	Q12754	1228 aa	Known RBP	2.61	□□□□□ -1.99
RSA1	YPL193W	RPP0	P05317	312 aa	Known RBP	2.6	□□□□□ -1.99
RSA1	YPL193W	PUT2	P07275	575 aa		2.6	□□□□□ -1.99
RSA1	YPL193W	SAM1	P10659	382 aa	Known RBP	2.6	□□□□□ -1.99
RSA1	YPL193W	PRS1	P32895	427 aa	Known RBP	2.6	□□□□□ -1.99
RSA1	YPL193W	SHP1	P34223	423 aa		2.6	□□□□□ -1.99
RSA1	YPL193W	YBL059W	P34224	193 aa		2.6	□□□□□ -1.99
RSA1	YPL193W	SNU114	P36048	1008 aa	Known RBP	2.6	□□□□□ -1.99
RSA1	YPL193W	YHL041W	P38730	149 aa		2.6	□□□□□ -1.99
RSA1	YPL193W	TVP23	P38962	199 aa		2.6	□□□□□ -1.99
RSA1	YPL193W	CSM2	P40465	213 aa		2.6	□□□□□ -1.99
RSA1	YPL193W	SEC24	P40482	926 aa	Known RBP	2.6	□□□□□ -1.99
RSA1	YPL193W	RRI2	Q12348	645 aa		2.6	□□□□□ -1.99
RSA1	YPL193W	GCN1	P33892	2672 aa	Known RBP	2.59	□□□□□ -1.99
RSA1	YPL193W	SGV1	P23293	657 aa	Known RBP	2.59	□□□□□ -1.99
RSA1	YPL193W	ERG8	P24521	451 aa		2.59	□□□□□ -1.99
RSA1	YPL193W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	2.59	□□□□□ -1.99	not detected
RSA1	YPL193W	TEF4	P36008	412 aa	Known RBP	2.59	□□□□□ -1.99
RSA1	YPL193W	JNM1	P36224	373 aa		2.59	□□□□□ -1.99
RSA1	YPL193W	BUR6	P40096	142 aa		2.59	□□□□□ -1.99
RSA1	YPL193W	ALG8	P40351	577 aa		2.59	□□□□□ -1.99
RSA1	YPL193W	HEF3	P53978	1044 aa	Known RBP	2.59	□□□□□ -1.99
RSA1	YPL193W	RSM23	Q01163	450 aa		2.59	□□□□□ -1.99
RSA1	YPL193W	YMR321C	Q04898	105 aa		2.59	□□□□□ -1.99
RSA1	YPL193W	BLS1	Q06071	122 aa		2.59	□□□□□ -1.99
RSA1	YPL193W	VCX1	Q99385	411 aa		2.59	□□□□□ -1.99
RSA1	YPL193W	RIF1	P29539	1916 aa		2.59	□□□□□ -1.99
RSA1	YPL193W	YLR422W	Q06409	1932 aa		2.58	□□□□□ -2
RSA1	YPL193W	YLR302C	O13544	120 aa		2.58	□□□□□ -2
RSA1	YPL193W	RPL40A	P0CH08	128 aa	Known RBP	2.58	□□□□□ -2
RSA1	YPL193W	RPL40B	P0CH09	128 aa	Known RBP	2.58	□□□□□ -2
RSA1	YPL193W	MAS2	P11914	482 aa		2.58	□□□□□ -2
RSA1	YPL193W	CLN3	P13365	580 aa		2.58	□□□□□ -2
RSA1	YPL193W	CPR1	P14832	162 aa	Known RBP	2.58	□□□□□ -2
RSA1	YPL193W	HSC82	P15108	705 aa	Known RBP	2.58	□□□□□ -2
RSA1	YPL193W	SAM2	P19358	384 aa	Known RBP	2.58	□□□□□ -2
RSA1	YPL193W	PRE8	P23639	250 aa		2.58	□□□□□ -2
RSA1	YPL193W	CBF2	P32504	956 aa		2.58	□□□□□ -2
RSA1	YPL193W	SPR1	P32603	445 aa		2.58	□□□□□ -2
RSA1	YPL193W	DBP7	P36120	742 aa	Known RBP	2.58	□□□□□ -2
RSA1	YPL193W	IME4	P41833	600 aa		2.58	□□□□□ -2
RSA1	YPL193W	AZR1	P50080	613 aa		2.58	□□□□□ -2
RSA1	YPL193W	DUG3	P53871	357 aa		2.58	□□□□□ -2
RSA1	YPL193W	RHO4	Q00246	291 aa		2.58	□□□□□ -2
RSA1	YPL193W	SYO1	Q07395	620 aa		2.58	□□□□□ -2
RSA1	YPL193W	RRG7	Q08774	242 aa	Predicted RBP	2.58	□□□□□ -2
RSA1	YPL193W	HRT3	Q12347	344 aa		2.58	□□□□□ -2
RSA1	YPL193W	ERP3	Q12403	225 aa		2.58	□□□□□ -2
RSA1	YPL193W	BEM2	P39960	2167 aa	Known RBP	2.57	□□□□□ -2
RSA1	YPL193W	AMD1	P15274	810 aa	Known RBP	2.57	□□□□□ -2
RSA1	YPL193W	PUT3	P25502	979 aa	Predicted RBP	2.57	□□□□□ -2
RSA1	YPL193W	YCL049C	P25577	312 aa		2.57	□□□□□ -2
RSA1	YPL193W	CNS1	P33313	385 aa		2.57	□□□□□ -2
RSA1	YPL193W	PTH2	P34222	208 aa		2.57	□□□□□ -2
RSA1	YPL193W	TSC10	P38342	320 aa		2.57	□□□□□ -2
RSA1	YPL193W	PSD1	P39006	500 aa		2.57	□□□□□ -2
RSA1	YPL193W	UIP3	P39547	235 aa		2.57	□□□□□ -2
RSA1	YPL193W	RIC1	P40395	1056 aa		2.57	□□□□□ -2
RSA1	YPL193W	YGR210C	P42942	411 aa		2.57	□□□□□ -2
RSA1	YPL193W	MDM1	Q01846	1127 aa		2.57	□□□□□ -2
RSA1	YPL193W	PNG1	Q02890	363 aa		2.57	□□□□□ -2
RSA1	YPL193W	SVL3	Q03088	825 aa	Known RBP	2.57	□□□□□ -2
RSA1	YPL193W	TMS1	Q12116	473 aa		2.57	□□□□□ -2
RSA1	YPL193W	YDL009C	Q12210	107 aa		2.57	□□□□□ -2
RSA1	YPL193W	CTF3	Q12748	733 aa		2.57	□□□□□ -2
RSA1	YPL193W	YBR085C-A	O43137	85 aa		2.56	□□□□□ -2
RSA1	YPL193W	ISY1	P21374	235 aa	Predicted RBP	2.56	□□□□□ -2
RSA1	YPL193W	OPI1	P21957	404 aa		2.56	□□□□□ -2
RSA1	YPL193W	CHS3	P29465	1165 aa		2.56	□□□□□ -2
RSA1	YPL193W	SSH4	P32343	579 aa		2.56	□□□□□ -2
RSA1	YPL193W	NFU1	P32860	256 aa		2.56	□□□□□ -2
RSA1	YPL193W	MRS6	P32864	603 aa	Known RBP	2.56	□□□□□ -2
RSA1	YPL193W	REG2	P38232	338 aa		2.56	□□□□□ -2
RSA1	YPL193W	SIM1	P40472	476 aa		2.56	□□□□□ -2
RSA1	YPL193W	YIL067C	P40514	678 aa		2.56	□□□□□ -2
RSA1	YPL193W	SRB7	P47822	140 aa		2.56	□□□□□ -2
RSA1	YPL193W	ELP3	Q02908	557 aa	Known RBP	2.56	□□□□□ -2
RSA1	YPL193W	CSI1	Q04368	295 aa		2.56	□□□□□ -2
RSA1	YPL193W	SKG3	Q06315	1026 aa		2.56	□□□□□ -2
RSA1	YPL193W	RLP24	Q07915	199 aa	Known RBP	2.56	□□□□□ -2
RSA1	YPL193W	SYN8	P31377	255 aa		2.55	□□□□□ -2
RSA1	YPL193W	XRS2	P33301	854 aa		2.55	□□□□□ -2
RSA1	YPL193W	MCR1	P36060	302 aa	Known RBP	2.55	□□□□□ -2
RSA1	YPL193W	KTR3	P38130	404 aa	Predicted RBP	2.55	□□□□□ -2
RSA1	YPL193W	PHO88	P38264	188 aa	Predicted RBP	2.55	□□□□□ -2
RSA1	YPL193W	IFA38	P38286	347 aa		2.55	□□□□□ -2
RSA1	YPL193W	ALD5	P40047	520 aa	Known RBP	2.55	□□□□□ -2
RSA1	YPL193W	IES5	P40060	125 aa		2.55	□□□□□ -2
RSA1	YPL193W	VID27	P40157	782 aa		2.55	□□□□□ -2
RSA1	YPL193W	SNG1	P46950	547 aa		2.55	□□□□□ -2
RSA1	YPL193W	UBX4	P54730	416 aa		2.55	□□□□□ -2
RSA1	YPL193W	MEH1	Q02205	184 aa		2.55	□□□□□ -2
RSA1	YPL193W	SPC19	Q03954	165 aa		2.55	□□□□□ -2
RSA1	YPL193W	PBA1	Q05778	276 aa		2.55	□□□□□ -2
RSA1	YPL193W	SPH1	Q06160	661 aa		2.55	□□□□□ -2
RSA1	YPL193W	PSK2	Q08217	1101 aa		2.55	□□□□□ -2
RSA1	YPL193W	NBP2	Q12163	236 aa		2.55	□□□□□ -2
RSA1	YPL193W	INH1	P01097	85 aa		2.54	□□□□□ -2
RSA1	YPL193W	SNA3	P14359	133 aa		2.54	□□□□□ -2
RSA1	YPL193W	UBC1	P21734	215 aa	Known RBP	2.54	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms