RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C YEL073CP39974 107 aa5.15□□□□□ -1.58
RAT1YOR048C BST1P43571 1029 aa5.15□□□□□ -1.58
RAT1YOR048C BNA6P43619 295 aa5.15□□□□□ -1.58
RAT1YOR048C STR3P53101 465 aaKnown RBP5.15□□□□□ -1.58
RAT1YOR048C SCW11P53189 542 aa5.15□□□□□ -1.58
RAT1YOR048C RPL6AQ02326 176 aaKnown RBP5.15□□□□□ -1.58
RAT1YOR048C YPL107WQ02873 248 aa5.15□□□□□ -1.58
RAT1YOR048C PNG1Q02890 363 aa5.15□□□□□ -1.58
RAT1YOR048C NOG1Q02892 647 aaKnown RBP5.15□□□□□ -1.58
RAT1YOR048C RPN5Q12250 445 aaKnown RBP5.15□□□□□ -1.58
RAT1YOR048C PST2Q12335 198 aaKnown RBP5.15□□□□□ -1.58
RAT1YOR048C FAR1P21268 830 aa5.15□□□□□ -1.58
RAT1YOR048C PDE1P22434 369 aa5.15□□□□□ -1.58
RAT1YOR048C YCK1P23291 538 aa5.15□□□□□ -1.58
RAT1YOR048C ADK2P26364 225 aa5.15□□□□□ -1.58
RAT1YOR048C PHO91P27514 894 aa5.15□□□□□ -1.58
RAT1YOR048C ATP11P32453 318 aa5.15□□□□□ -1.58
RAT1YOR048C LHP1P33399 275 aaKnown RBP5.15□□□□□ -1.58
RAT1YOR048C ZRT3P34240 503 aa5.15□□□□□ -1.58
RAT1YOR048C PHO11P35842 467 aa5.15□□□□□ -1.58
RAT1YOR048C FRE2P36033 711 aa5.15□□□□□ -1.58
RAT1YOR048C LDB7P38210 180 aa5.15□□□□□ -1.58
RAT1YOR048C PHO12P38693 467 aa5.15□□□□□ -1.58
RAT1YOR048C GTS1P40956 396 aa5.15□□□□□ -1.58
RAT1YOR048C FET5P43561 622 aa5.15□□□□□ -1.58
RAT1YOR048C CSL4P53859 292 aaPredicted RBP5.15□□□□□ -1.58
RAT1YOR048C YAT1P80235 687 aa5.15□□□□□ -1.58
RAT1YOR048C MSC1Q03104 513 aa5.15□□□□□ -1.58
RAT1YOR048C SRN2Q99176 213 aa5.15□□□□□ -1.58
RAT1YOR048C SAM35P14693 329 aa5.15□□□□□ -1.59
RAT1YOR048C AAR2P32357 355 aaPredicted RBP5.15□□□□□ -1.59
RAT1YOR048C CLG1P35190 452 aa5.15□□□□□ -1.59
RAT1YOR048C MCM7P38132 845 aa5.15□□□□□ -1.59
RAT1YOR048C YHR020WP38708 688 aaKnown RBP5.15□□□□□ -1.59
RAT1YOR048C SER2P42941 309 aa5.15□□□□□ -1.59
RAT1YOR048C YNR068CP53754 272 aa5.15□□□□□ -1.59
RAT1YOR048C AIM32Q04689 311 aa5.15□□□□□ -1.59
RAT1YOR048C PLB3Q08108 686 aa5.15□□□□□ -1.59
RAT1YOR048C LEA1Q08963 238 aaPredicted RBP5.15□□□□□ -1.59
RAT1YOR048C YDR056CQ12025 205 aa5.15□□□□□ -1.59
RAT1YOR048C HAL9Q12180 1030 aa5.15□□□□□ -1.59
RAT1YOR048C SVS1Q12254 260 aa5.15□□□□□ -1.59
RAT1YOR048C YDL199CQ12407 687 aa5.15□□□□□ -1.59
RAT1YOR048C MHT1Q12525 324 aa5.15□□□□□ -1.59
RAT1YOR048C PRP2P20095 876 aaPredicted RBP5.14□□□□□ -1.59
RAT1YOR048C PEX1P24004 1043 aa5.14□□□□□ -1.59
RAT1YOR048C GUT2P32191 649 aa5.14□□□□□ -1.59
RAT1YOR048C NDC1P32500 655 aa5.14□□□□□ -1.59
RAT1YOR048C PRP18P33411 251 aaPredicted RBP5.14□□□□□ -1.59
RAT1YOR048C SOP4P39543 234 aaPredicted RBP5.14□□□□□ -1.59
RAT1YOR048C YJR107WP47145 328 aa5.14□□□□□ -1.59
RAT1YOR048C MET13P53128 600 aa5.14□□□□□ -1.59
RAT1YOR048C SDH1Q00711 640 aa5.14□□□□□ -1.59
RAT1YOR048C URC2Q04411 772 aa5.14□□□□□ -1.59
RAT1YOR048C YDR109CQ04585 715 aa5.14□□□□□ -1.59
RAT1YOR048C SSQ1Q05931 657 aaPredicted RBP5.14□□□□□ -1.59
RAT1YOR048C YLL007CQ07799 665 aa5.14□□□□□ -1.59
RAT1YOR048C IRC10Q08118 586 aa5.14□□□□□ -1.59
RAT1YOR048C THP1Q08231 455 aa5.14□□□□□ -1.59
RAT1YOR048C RKM1Q08961 583 aaPredicted RBP5.14□□□□□ -1.59
RAT1YOR048C SUT2Q12286 268 aa5.14□□□□□ -1.59
RAT1YOR048C AHA1Q12449 350 aaKnown RBP5.14□□□□□ -1.59
RAT1YOR048C MDM12Q92328 271 aa5.14□□□□□ -1.59
RAT1YOR048C SPT3P06844 337 aa5.14□□□□□ -1.59
RAT1YOR048C AAT2P23542 418 aaKnown RBP5.14□□□□□ -1.59
RAT1YOR048C ERG9P29704 444 aa5.14□□□□□ -1.59
RAT1YOR048C MF(ALPHA)2P32435 120 aa5.14□□□□□ -1.59
RAT1YOR048C SLX5P32828 619 aaKnown RBP5.14□□□□□ -1.59
RAT1YOR048C SEC61P32915 480 aa5.14□□□□□ -1.59
RAT1YOR048C THI80P35202 319 aa5.14□□□□□ -1.59
RAT1YOR048C MAK5P38112 773 aaPredicted RBP5.14□□□□□ -1.59
RAT1YOR048C ARA1P38115 344 aa5.14□□□□□ -1.59
RAT1YOR048C YHR045WP38775 560 aa5.14□□□□□ -1.59
RAT1YOR048C TAT2P38967 592 aa5.14□□□□□ -1.59
RAT1YOR048C TIR3P40552 269 aa5.14□□□□□ -1.59
RAT1YOR048C IDP3P53982 420 aaKnown RBP5.14□□□□□ -1.59
RAT1YOR048C SWP1Q02795 286 aa5.14□□□□□ -1.59
RAT1YOR048C YMD8Q03697 442 aa5.14□□□□□ -1.59
RAT1YOR048C GGA1Q06336 557 aa5.14□□□□□ -1.59
RAT1YOR048C HSP42Q12329 375 aa5.14□□□□□ -1.59
RAT1YOR048C MMP1Q12372 583 aa5.14□□□□□ -1.59
RAT1YOR048C ALG7P07286 448 aa5.13□□□□□ -1.59
RAT1YOR048C MAS1P10507 462 aa5.13□□□□□ -1.59
RAT1YOR048C YKL100CP34248 587 aa5.13□□□□□ -1.59
RAT1YOR048C PCL5P38794 229 aa5.13□□□□□ -1.59
RAT1YOR048C CEM1P39525 442 aa5.13□□□□□ -1.59
RAT1YOR048C ALD5P40047 520 aaKnown RBP5.13□□□□□ -1.59
RAT1YOR048C UFE1P41834 346 aa5.13□□□□□ -1.59
RAT1YOR048C GNP1P48813 663 aa5.13□□□□□ -1.59
RAT1YOR048C MDM32Q12171 622 aa5.13□□□□□ -1.59
RAT1YOR048C RGT2Q12300 763 aa5.13□□□□□ -1.59
RAT1YOR048C GTT2Q12390 233 aa5.13□□□□□ -1.59
RAT1YOR048C PEX11Q12462 236 aa5.13□□□□□ -1.59
RAT1YOR048C GIT1P25346 518 aa5.13□□□□□ -1.59
RAT1YOR048C RSC6P25632 483 aa5.13□□□□□ -1.59
RAT1YOR048C RCK1P38622 512 aa5.13□□□□□ -1.59
RAT1YOR048C YHL041WP38730 149 aa5.13□□□□□ -1.59
RAT1YOR048C SBE22P38814 852 aa5.13□□□□□ -1.59
RAT1YOR048C GAB1P41733 394 aa5.13□□□□□ -1.59
RAT1YOR048C SRL4Q03085 281 aa5.13□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms