RNA–Protein interactions for RNA: YNL329C

PEX6, Transcript of AAA-peroxin, yeast

Gene PEX6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX6	YNL329C	RPN2	P32565	945 aa	Known RBP	3.13	□□□□□ -1.91
PEX6	YNL329C	SMI1	P32566	505 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	LAS1	P36146	502 aa	Predicted RBP	3.13	□□□□□ -1.91
PEX6	YNL329C	FAD1	P38913	306 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	SOL4	P53315	255 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	RHO5	P53879	331 aa	Known RBP	3.13	□□□□□ -1.91
PEX6	YNL329C	HEF3	P53978	1044 aa	Known RBP	3.13	□□□□□ -1.91
PEX6	YNL329C	SKO1	Q02100	647 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	POS5	Q06892	414 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	AEP3	Q12089	606 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	DOP1	Q03921	1698 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	YPR089W	O13585	888 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	RHO2	P06781	192 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	YML002W	P0CF17	737 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	PRP2	P20095	876 aa	Predicted RBP	3.13	□□□□□ -1.91
PEX6	YNL329C	LAG1	P38703	411 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	URB2	P47108	1174 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	SEC5	P89102	971 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	GLO2	Q05584	274 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	DCS1	Q06151	350 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	NRT1	Q08485	598 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	KEL3	Q08979	651 aa	Predicted RBP	3.13	□□□□□ -1.91
PEX6	YNL329C	YDR061W	Q12298	539 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	BNI1	P41832	1953 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	DNF3	Q12674	1656 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	TY1B-A	O13527	1196 aa	Known RBP	3.13	□□□□□ -1.91
PEX6	YNL329C	TCM62	P38228	572 aa	Known RBP	3.13	□□□□□ -1.91
PEX6	YNL329C	UBA4	P38820	440 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	PES4	P39684	611 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	HXT9	P40885	567 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	GAT1	P43574	510 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	YPL107W	Q02873	248 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	MMR1	Q06324	491 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	VAM3	Q12241	283 aa		3.13	□□□□□ -1.91
PEX6	YNL329C	NUP188	P52593	1655 aa	Known RBP	3.12	□□□□□ -1.91
PEX6	YNL329C	PEP4	P07267	405 aa	Known RBP	3.12	□□□□□ -1.91
PEX6	YNL329C	PEP5	P12868	1029 aa		3.12	□□□□□ -1.91
PEX6	YNL329C	REC114	P32841	428 aa		3.12	□□□□□ -1.91
PEX6	YNL329C	PDR3	P33200	976 aa		3.12	□□□□□ -1.91
PEX6	YNL329C	XBP1	P40489	647 aa		3.12	□□□□□ -1.91
PEX6	YNL329C	COS5	P47187	383 aa		3.12	□□□□□ -1.91
PEX6	YNL329C	OCA2	P53949	197 aa		3.12	□□□□□ -1.91
PEX6	YNL329C	IDP3	P53982	420 aa	Known RBP	3.12	□□□□□ -1.91
PEX6	YNL329C	ACL4	Q03771	387 aa		3.12	□□□□□ -1.91
PEX6	YNL329C	COS7	Q07788	383 aa		3.12	□□□□□ -1.91
PEX6	YNL329C	RPP0	P05317	312 aa	Known RBP	3.12	□□□□□ -1.91
PEX6	YNL329C	RAD52	P06778	471 aa	Known RBP	3.12	□□□□□ -1.91
PEX6	YNL329C	CLN1	P20437	546 aa		3.12	□□□□□ -1.91
PEX6	YNL329C	BEM1	P29366	551 aa		3.12	□□□□□ -1.91
PEX6	YNL329C	FLO10	P36170	1169 aa		3.12	□□□□□ -1.91
PEX6	YNL329C	TIF4631	P39935	952 aa	Known RBP	3.12	□□□□□ -1.91
PEX6	YNL329C	NMD5	P46970	1048 aa		3.12	□□□□□ -1.91
PEX6	YNL329C	PYK2	P52489	506 aa	Known RBP	3.12	□□□□□ -1.91
PEX6	YNL329C	PKP2	P53170	491 aa		3.12	□□□□□ -1.91
PEX6	YNL329C	RSC9	Q03124	581 aa		3.12	□□□□□ -1.91
PEX6	YNL329C	CUE5	Q08412	411 aa	Known RBP	3.12	□□□□□ -1.91
PEX6	YNL329C	TPM1	P17536	199 aa	Known RBP	3.11	□□□□□ -1.91
PEX6	YNL329C	SPO7	P18410	259 aa		3.11	□□□□□ -1.91
PEX6	YNL329C	YIL024C	P40543	189 aa		3.11	□□□□□ -1.91
PEX6	YNL329C	PIB2	P53191	635 aa		3.11	□□□□□ -1.91
PEX6	YNL329C	YIF1	P53845	314 aa	Known RBP	3.11	□□□□□ -1.91
PEX6	YNL329C	PRP42	Q03776	544 aa	Known RBP	3.11	□□□□□ -1.91
PEX6	YNL329C	PPM1	Q04081	328 aa		3.11	□□□□□ -1.91
PEX6	YNL329C	YDL144C	Q07589	356 aa		3.11	□□□□□ -1.91
PEX6	YNL329C	CYB2	P00175	591 aa		3.11	□□□□□ -1.91
PEX6	YNL329C	ATP10	P18496	279 aa		3.11	□□□□□ -1.91
PEX6	YNL329C	ILV6	P25605	309 aa	Known RBP	3.11	□□□□□ -1.91
PEX6	YNL329C	MSP1	P28737	362 aa		3.11	□□□□□ -1.91
PEX6	YNL329C	MSN2	P33748	704 aa		3.11	□□□□□ -1.91
PEX6	YNL329C	KEL1	P38853	1164 aa	Known RBP	3.11	□□□□□ -1.91
PEX6	YNL329C	VPS41	P38959	992 aa		3.11	□□□□□ -1.91
PEX6	YNL329C	YJL132W	P47014	750 aa		3.11	□□□□□ -1.91
PEX6	YNL329C	COP1	P53622	1201 aa	Known RBP	3.11	□□□□□ -1.91
PEX6	YNL329C	CTL1	Q03220	320 aa	Known RBP	3.11	□□□□□ -1.91
PEX6	YNL329C	MLP1	Q02455	1875 aa	Known RBP	3.11	□□□□□ -1.91
PEX6	YNL329C	NUP192	P47054	1683 aa		3.11	□□□□□ -1.91
PEX6	YNL329C	HIR2	P32480	875 aa		3.11	□□□□□ -1.91
PEX6	YNL329C	LTV1	P34078	463 aa		3.11	□□□□□ -1.91
PEX6	YNL329C	SER3	P40054	469 aa		3.11	□□□□□ -1.91
PEX6	YNL329C	YIR016W	P40572	265 aa		3.11	□□□□□ -1.91
PEX6	YNL329C	EPL1	P43572	832 aa		3.11	□□□□□ -1.91
PEX6	YNL329C	EKI1	Q03764	534 aa		3.11	□□□□□ -1.91
PEX6	YNL329C	CRC1	Q12289	327 aa		3.11	□□□□□ -1.91
PEX6	YNL329C	BRR1	Q99177	341 aa	Predicted RBP	3.11	□□□□□ -1.91
PEX6	YNL329C	RPL42A	P0CX27	106 aa	Known RBP	3.1	□□□□□ -1.91
PEX6	YNL329C	RPL42B	P0CX28	106 aa	Known RBP	3.1	□□□□□ -1.91
PEX6	YNL329C	SEC7	P11075	2009 aa	Known RBP	3.1	□□□□□ -1.91
PEX6	YNL329C	BAR1	P12630	587 aa		3.1	□□□□□ -1.91
PEX6	YNL329C	SNF2	P22082	1703 aa		3.1	□□□□□ -1.91
PEX6	YNL329C	SNC1	P31109	117 aa		3.1	□□□□□ -1.91
PEX6	YNL329C	RIM1	P32445	135 aa	Known RBP	3.1	□□□□□ -1.91
PEX6	YNL329C	RRP1	P35178	278 aa	Predicted RBP	3.1	□□□□□ -1.91
PEX6	YNL329C	YHR210C	P38893	341 aa		3.1	□□□□□ -1.91
PEX6	YNL329C	FET5	P43561	622 aa		3.1	□□□□□ -1.91
PEX6	YNL329C	MPP10	P47083	593 aa	Known RBP	3.1	□□□□□ -1.91
PEX6	YNL329C	YGL082W	P53155	381 aa		3.1	□□□□□ -1.91
PEX6	YNL329C	IVY1	Q04934	453 aa		3.1	□□□□□ -1.91
PEX6	YNL329C	DIC1	Q06143	298 aa		3.1	□□□□□ -1.91
PEX6	YNL329C	RRP9	Q06506	573 aa	Known RBP	3.1	□□□□□ -1.91
PEX6	YNL329C	YSP2	Q06681	1438 aa		3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms