RNA–Protein interactions for RNA: YMR179W

SPT21, Transcript of Protein with a role in transcriptional silencing, yeastyeast

Gene SPT21, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT21YMR179W RPT6Q01939 405 aaKnown RBP1.41□□□□□ -2.18
SPT21YMR179W SYF1Q04048 859 aaPredicted RBP1.41□□□□□ -2.18
SPT21YMR179W RCN2Q12044 265 aa1.41□□□□□ -2.18
SPT21YMR179W ERP4Q12450 207 aa1.41□□□□□ -2.18
SPT21YMR179W MET17P06106 444 aa1.41□□□□□ -2.18
SPT21YMR179W BUB3P26449 341 aa1.41□□□□□ -2.18
SPT21YMR179W NDI1P32340 513 aa1.41□□□□□ -2.18
SPT21YMR179W GLC7P32598 312 aaKnown RBP1.41□□□□□ -2.18
SPT21YMR179W NPL6P32832 435 aa1.41□□□□□ -2.18
SPT21YMR179W UBP11P36026 717 aa1.41□□□□□ -2.18
SPT21YMR179W PIM1P36775 1133 aa1.41□□□□□ -2.18
SPT21YMR179W NAT2P37293 288 aa1.41□□□□□ -2.18
SPT21YMR179W BNA4P38169 460 aa1.41□□□□□ -2.18
SPT21YMR179W CCT6P39079 546 aa1.41□□□□□ -2.18
SPT21YMR179W SPO22P40511 975 aa1.41□□□□□ -2.18
SPT21YMR179W ALK1P43633 760 aaKnown RBP1.41□□□□□ -2.18
SPT21YMR179W AIM22P47051 409 aa1.41□□□□□ -2.18
SPT21YMR179W LCL3P53153 274 aa1.41□□□□□ -2.18
SPT21YMR179W SHY1P53266 389 aa1.41□□□□□ -2.18
SPT21YMR179W BUD22Q04347 519 aaKnown RBP1.41□□□□□ -2.18
SPT21YMR179W YMR027WQ04371 470 aa1.41□□□□□ -2.18
SPT21YMR179W YEH1Q07804 573 aa1.41□□□□□ -2.18
SPT21YMR179W FMP40Q08968 688 aaPredicted RBP1.41□□□□□ -2.18
SPT21YMR179W SCM3Q12334 223 aa1.41□□□□□ -2.18
SPT21YMR179W CBS1P14066 229 aa1.4□□□□□ -2.19
SPT21YMR179W FUR1P18562 216 aaKnown RBP1.4□□□□□ -2.19
SPT21YMR179W OCA4P25366 362 aa1.4□□□□□ -2.19
SPT21YMR179W FRE2P36033 711 aa1.4□□□□□ -2.19
SPT21YMR179W UTP9P38882 575 aaKnown RBP1.4□□□□□ -2.19
SPT21YMR179W IBD2P53892 351 aa1.4□□□□□ -2.19
SPT21YMR179W HEF3P53978 1044 aaKnown RBP1.4□□□□□ -2.19
SPT21YMR179W TOF2Q02208 771 aa1.4□□□□□ -2.19
SPT21YMR179W YML037CQ03703 340 aa1.4□□□□□ -2.19
SPT21YMR179W RRG1Q12167 365 aaPredicted RBP1.4□□□□□ -2.19
SPT21YMR179W YJR112W-AQ3E743 109 aa1.4□□□□□ -2.19
SPT21YMR179W SGS1P35187 1447 aa1.4□□□□□ -2.19
SPT21YMR179W RED1P14291 827 aa1.4□□□□□ -2.19
SPT21YMR179W ROX1P25042 368 aa1.4□□□□□ -2.19
SPT21YMR179W ERG3P32353 365 aa1.4□□□□□ -2.19
SPT21YMR179W UTH1P36135 365 aa1.4□□□□□ -2.19
SPT21YMR179W REG2P38232 338 aa1.4□□□□□ -2.19
SPT21YMR179W YEL057CP39983 233 aa1.4□□□□□ -2.19
SPT21YMR179W SGN1P40561 250 aaKnown RBP RIP-Chip data1.4□□□□□ -2.19not detected
SPT21YMR179W MET28P40573 187 aa1.4□□□□□ -2.19
SPT21YMR179W RPC11Q04307 110 aaPredicted RBP1.4□□□□□ -2.19
SPT21YMR179W YLR108CQ12259 485 aa1.4□□□□□ -2.19
SPT21YMR179W SFI1Q12369 946 aa1.4□□□□□ -2.19
SPT21YMR179W PGA3Q12746 312 aaKnown RBP1.4□□□□□ -2.19
SPT21YMR179W YPT6Q99260 215 aa1.4□□□□□ -2.19
SPT21YMR179W MES1P00958 751 aaKnown RBP1.39□□□□□ -2.19
SPT21YMR179W PET123P17558 318 aa1.39□□□□□ -2.19
SPT21YMR179W MIX23P38162 196 aa1.39□□□□□ -2.19
SPT21YMR179W PAN6P40459 309 aa1.39□□□□□ -2.19
SPT21YMR179W YGR066CP53242 292 aa1.39□□□□□ -2.19
SPT21YMR179W ZPR1P53303 486 aaKnown RBP1.39□□□□□ -2.19
SPT21YMR179W YMR155WQ03795 547 aa1.39□□□□□ -2.19
SPT21YMR179W HRI1Q05905 244 aaKnown RBP1.39□□□□□ -2.19
SPT21YMR179W WTM1Q12363 437 aaKnown RBP1.39□□□□□ -2.19
SPT21YMR179W DFR1P07807 211 aaKnown RBP RIP-Chip data1.38□□□□□ -2.19not detected
SPT21YMR179W PRP2P20095 876 aaPredicted RBP1.38□□□□□ -2.19
SPT21YMR179W PCL1P24867 279 aa1.38□□□□□ -2.19
SPT21YMR179W BYE1P36106 594 aa1.38□□□□□ -2.19
SPT21YMR179W MRP21P38175 177 aa1.38□□□□□ -2.19
SPT21YMR179W AFG3P39925 761 aa1.38□□□□□ -2.19
SPT21YMR179W LSM5P40089 93 aaKnown RBP1.38□□□□□ -2.19
SPT21YMR179W MET18P40469 1032 aa1.38□□□□□ -2.19
SPT21YMR179W DOT5P40553 215 aa1.38□□□□□ -2.19
SPT21YMR179W GPD2P41911 440 aaKnown RBP1.38□□□□□ -2.19
SPT21YMR179W VID30P53076 958 aa1.38□□□□□ -2.19
SPT21YMR179W YGR250CP53316 781 aaKnown RBP1.38□□□□□ -2.19
SPT21YMR179W OGG1P53397 376 aaPredicted RBP1.38□□□□□ -2.19
SPT21YMR179W GOR1P53839 350 aa1.38□□□□□ -2.19
SPT21YMR179W JJJ1P53863 590 aa1.38□□□□□ -2.19
SPT21YMR179W VPS38Q05919 439 aa1.38□□□□□ -2.19
SPT21YMR179W GRX6Q12438 231 aa1.38□□□□□ -2.19
SPT21YMR179W RTN2Q12443 393 aa1.38□□□□□ -2.19
SPT21YMR179W GAL80P04387 435 aa1.38□□□□□ -2.19
SPT21YMR179W EST1P17214 699 aaPredicted RBP1.38□□□□□ -2.19
SPT21YMR179W CRM1P30822 1084 aaKnown RBP1.38□□□□□ -2.19
SPT21YMR179W ATP11P32453 318 aa1.38□□□□□ -2.19
SPT21YMR179W TCD2P36101 447 aaKnown RBP1.38□□□□□ -2.19
SPT21YMR179W VID24P38263 362 aa1.38□□□□□ -2.19
SPT21YMR179W SMF1P38925 575 aa1.38□□□□□ -2.19
SPT21YMR179W HAL1Q01766 294 aa1.38□□□□□ -2.19
SPT21YMR179W FDH1Q08911 376 aa1.38□□□□□ -2.19
SPT21YMR179W RIM20Q12033 661 aa1.38□□□□□ -2.19
SPT21YMR179W AVL9Q12500 764 aa1.38□□□□□ -2.19
SPT21YMR179W YOL159C-AQ3E769 90 aa1.38□□□□□ -2.19
SPT21YMR179W HOM3P10869 527 aa1.37□□□□□ -2.19
SPT21YMR179W PDX1P16451 410 aa1.37□□□□□ -2.19
SPT21YMR179W GPI10P30777 616 aa1.37□□□□□ -2.19
SPT21YMR179W VMA8P32610 256 aaKnown RBP1.37□□□□□ -2.19
SPT21YMR179W SEF1P34228 1148 aa1.37□□□□□ -2.19
SPT21YMR179W CST26P38226 397 aa1.37□□□□□ -2.19
SPT21YMR179W ALG5P40350 334 aa1.37□□□□□ -2.19
SPT21YMR179W PRM5P40476 318 aa1.37□□□□□ -2.19
SPT21YMR179W IMD4P50094 524 aaKnown RBP1.37□□□□□ -2.19
SPT21YMR179W POP6P53218 158 aa1.37□□□□□ -2.19
SPT21YMR179W IPI3P53877 555 aa1.37□□□□□ -2.19
SPT21YMR179W RNY1Q02933 434 aaKnown RBP1.37□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms