RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C MGM101P32787 269 aaKnown RBP7.15□□□□□ -1.27
AFG2YLR397C MRPL3P36516 390 aa7.15□□□□□ -1.27
AFG2YLR397C DUG2P38149 878 aa7.15□□□□□ -1.27
AFG2YLR397C SLI15P38283 698 aa7.15□□□□□ -1.27
AFG2YLR397C SPL2P38839 148 aa7.15□□□□□ -1.27
AFG2YLR397C TIF11P38912 153 aaKnown RBP7.15□□□□□ -1.27
AFG2YLR397C SHU2P38957 223 aa7.15□□□□□ -1.27
AFG2YLR397C PAC1P39946 494 aaKnown RBP7.15□□□□□ -1.27
AFG2YLR397C CTR1P49573 406 aa7.15□□□□□ -1.27
AFG2YLR397C CLD1P53264 445 aa7.15□□□□□ -1.27
AFG2YLR397C PFA5Q03289 374 aa7.15□□□□□ -1.27
AFG2YLR397C NHX1Q04121 633 aa7.15□□□□□ -1.27
AFG2YLR397C SIZ1Q04195 904 aa7.15□□□□□ -1.27
AFG2YLR397C FMP25Q08023 583 aa7.15□□□□□ -1.27
AFG2YLR397C ESA1Q08649 445 aa7.15□□□□□ -1.27
AFG2YLR397C SMF3Q12078 473 aaPredicted RBP7.15□□□□□ -1.27
AFG2YLR397C REC8Q12188 680 aa7.15□□□□□ -1.27
AFG2YLR397C RRP42Q12277 265 aaPredicted RBP7.15□□□□□ -1.27
AFG2YLR397C ATP1P07251 545 aaKnown RBP7.14□□□□□ -1.27
AFG2YLR397C MIP1P15801 1254 aa7.14□□□□□ -1.27
AFG2YLR397C YCK1P23291 538 aa7.14□□□□□ -1.27
AFG2YLR397C SFP1P32432 683 aa7.14□□□□□ -1.27
AFG2YLR397C EFM1P38732 585 aa7.14□□□□□ -1.27
AFG2YLR397C GTO1P48239 356 aa7.14□□□□□ -1.27
AFG2YLR397C AMA1P50082 593 aa7.14□□□□□ -1.27
AFG2YLR397C YAT1P80235 687 aa7.14□□□□□ -1.27
AFG2YLR397C CSN9Q03981 162 aa7.14□□□□□ -1.27
AFG2YLR397C RCO1Q04779 684 aa7.14□□□□□ -1.27
AFG2YLR397C RCL1Q08096 367 aaPredicted RBP7.14□□□□□ -1.27
AFG2YLR397C GIS3Q12418 502 aa7.14□□□□□ -1.27
AFG2YLR397C PHR1P05066 565 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27not detected
AFG2YLR397C DFR1P07807 211 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27not detected
AFG2YLR397C ADP1P25371 1049 aa7.13□□□□□ -1.27
AFG2YLR397C NDC1P32500 655 aa7.13□□□□□ -1.27
AFG2YLR397C MAL32P38158 584 aa7.13□□□□□ -1.27
AFG2YLR397C FTH1P38310 465 aa7.13□□□□□ -1.27
AFG2YLR397C MMS21P38632 267 aa7.13□□□□□ -1.27
AFG2YLR397C LAG1P38703 411 aa7.13□□□□□ -1.27
AFG2YLR397C YHR054CP38780 354 aa7.13□□□□□ -1.27
AFG2YLR397C RSC30P38781 883 aa7.13□□□□□ -1.27
AFG2YLR397C UFE1P41834 346 aa7.13□□□□□ -1.27
AFG2YLR397C MRH4P53166 561 aa7.13□□□□□ -1.27
AFG2YLR397C GET1P53192 235 aa7.13□□□□□ -1.27
AFG2YLR397C GPI1P53306 609 aa7.13□□□□□ -1.27
AFG2YLR397C MAL12P53341 584 aa7.13□□□□□ -1.27
AFG2YLR397C YNR062CP53748 327 aa7.13□□□□□ -1.27
AFG2YLR397C OST6Q03723 332 aa7.13□□□□□ -1.27
AFG2YLR397C AIM36Q03798 255 aa7.13□□□□□ -1.27
AFG2YLR397C MRN1Q08925 612 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27not detected
AFG2YLR397C RRI2Q12348 645 aa7.13□□□□□ -1.27
AFG2YLR397C FUR4P05316 633 aaKnown RBP7.13□□□□□ -1.27
AFG2YLR397C RAD52P06778 471 aaKnown RBP7.13□□□□□ -1.27
AFG2YLR397C SPE1P08432 466 aa7.13□□□□□ -1.27
AFG2YLR397C YPK2P18961 677 aa7.13□□□□□ -1.27
AFG2YLR397C NTG1P31378 399 aa7.13□□□□□ -1.27
AFG2YLR397C RGT1P32862 1170 aa7.13□□□□□ -1.27
AFG2YLR397C DHR2P36009 735 aaPredicted RBP7.13□□□□□ -1.27
AFG2YLR397C SNU114P36048 1008 aaKnown RBP7.13□□□□□ -1.27
AFG2YLR397C YBR056WP38081 501 aa7.13□□□□□ -1.27
AFG2YLR397C HSE1P38753 452 aa7.13□□□□□ -1.27
AFG2YLR397C YJL206CP39529 758 aa7.13□□□□□ -1.27
AFG2YLR397C IDP2P41939 412 aa7.13□□□□□ -1.27
AFG2YLR397C JIP4Q03361 876 aa7.13□□□□□ -1.27
AFG2YLR397C APC4Q04601 652 aa7.13□□□□□ -1.27
AFG2YLR397C TFC6Q06339 672 aa7.13□□□□□ -1.27
AFG2YLR397C OPT2Q06593 877 aa7.13□□□□□ -1.27
AFG2YLR397C ERG27Q12452 347 aaKnown RBP7.13□□□□□ -1.27
AFG2YLR397C COQ1P18900 473 aa7.12□□□□□ -1.27
AFG2YLR397C RNA14P25298 677 aaKnown RBP7.12□□□□□ -1.27
AFG2YLR397C PHA2P32452 334 aa7.12□□□□□ -1.27
AFG2YLR397C PCS60P38137 543 aaKnown RBP RIP-Chip data7.12□□□□□ -1.27not detected
AFG2YLR397C NCL1P38205 684 aaKnown RBP7.12□□□□□ -1.27
AFG2YLR397C SCY1P53009 804 aa7.12□□□□□ -1.27
AFG2YLR397C ARK1P53974 638 aa7.12□□□□□ -1.27
AFG2YLR397C TRS130Q03660 1102 aa7.12□□□□□ -1.27
AFG2YLR397C TMA10Q06177 86 aa7.12□□□□□ -1.27
AFG2YLR397C YDL129WQ07555 291 aa7.12□□□□□ -1.27
AFG2YLR397C HRT3Q12347 344 aa7.12□□□□□ -1.27
AFG2YLR397C MMP1Q12372 583 aa7.12□□□□□ -1.27
AFG2YLR397C MED11Q99278 115 aa7.12□□□□□ -1.27
AFG2YLR397C AI3P03877 415 aa7.12□□□□□ -1.27
AFG2YLR397C ZWF1P11412 505 aaKnown RBP7.12□□□□□ -1.27
AFG2YLR397C RRP7P25368 297 aaPredicted RBP7.12□□□□□ -1.27
AFG2YLR397C YDJ1P25491 409 aaKnown RBP7.12□□□□□ -1.27
AFG2YLR397C ERG9P29704 444 aa7.12□□□□□ -1.27
AFG2YLR397C RPD3P32561 433 aa7.12□□□□□ -1.27
AFG2YLR397C BEM3P32873 1128 aa7.12□□□□□ -1.27
AFG2YLR397C ECT1P33412 323 aa7.12□□□□□ -1.27
AFG2YLR397C SOF1P33750 489 aaKnown RBP7.12□□□□□ -1.27
AFG2YLR397C ZRT3P34240 503 aa7.12□□□□□ -1.27
AFG2YLR397C CST26P38226 397 aa7.12□□□□□ -1.27
AFG2YLR397C IST2P38250 946 aa7.12□□□□□ -1.27
AFG2YLR397C PTC7P38797 343 aa7.12□□□□□ -1.27
AFG2YLR397C UBA4P38820 440 aa7.12□□□□□ -1.27
AFG2YLR397C ICE2P40499 491 aa7.12□□□□□ -1.27
AFG2YLR397C RPL10P41805 221 aaKnown RBP7.12□□□□□ -1.27
AFG2YLR397C TAX4P47030 604 aa7.12□□□□□ -1.27
AFG2YLR397C SNN1P48232 102 aa7.12□□□□□ -1.27
AFG2YLR397C UBC12P52491 188 aa7.12□□□□□ -1.27
AFG2YLR397C ERV14P53173 138 aa7.12□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 431.9 ms