RNA–Protein interactions for RNA: YLR227W-B

YLR227W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR227W-B, Length 5,268 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR227W-BYLR227W-B TIF11P38912 153 aaKnown RBP3.34□□□□□ -1.88
YLR227W-BYLR227W-B IST1P53843 298 aaPredicted RBP3.34□□□□□ -1.88
YLR227W-BYLR227W-B SIW14P53965 281 aa3.34□□□□□ -1.88
YLR227W-BYLR227W-B YMR102CQ03177 834 aa3.34□□□□□ -1.88
YLR227W-BYLR227W-B LOT6Q07923 191 aa3.34□□□□□ -1.88
YLR227W-BYLR227W-B FDH1Q08911 376 aa3.34□□□□□ -1.88
YLR227W-BYLR227W-B PEX11Q12462 236 aa3.34□□□□□ -1.88
YLR227W-BYLR227W-B CBP6P07253 162 aaPredicted RBP3.34□□□□□ -1.88
YLR227W-BYLR227W-B MRPL8P22353 238 aa3.34□□□□□ -1.88
YLR227W-BYLR227W-B VAN1P23642 535 aa3.34□□□□□ -1.88
YLR227W-BYLR227W-B NAM7P30771 971 aaKnown RBP3.34□□□□□ -1.88
YLR227W-BYLR227W-B MDH3P32419 343 aaKnown RBP RIP-Chip data3.34□□□□□ -1.88not detected
YLR227W-BYLR227W-B GCD7P32502 381 aaPredicted RBP3.34□□□□□ -1.88
YLR227W-BYLR227W-B REV7P38927 245 aa3.34□□□□□ -1.88
YLR227W-BYLR227W-B RIC1P40395 1056 aa3.34□□□□□ -1.88
YLR227W-BYLR227W-B YIL092WP40497 633 aa3.34□□□□□ -1.88
YLR227W-BYLR227W-B AVT7P40501 490 aa3.34□□□□□ -1.88
YLR227W-BYLR227W-B RTA1P53047 317 aa3.34□□□□□ -1.88
YLR227W-BYLR227W-B CPR8P53728 308 aa3.34□□□□□ -1.88
YLR227W-BYLR227W-B UTP6Q02354 440 aaKnown RBP3.34□□□□□ -1.88
YLR227W-BYLR227W-B PFA5Q03289 374 aa3.34□□□□□ -1.88
YLR227W-BYLR227W-B YMR087WQ04299 284 aa3.34□□□□□ -1.88
YLR227W-BYLR227W-B MEI5P32489 222 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B MAE1P36013 669 aaKnown RBP3.33□□□□□ -1.88
YLR227W-BYLR227W-B CCT2P39076 527 aaKnown RBP3.33□□□□□ -1.88
YLR227W-BYLR227W-B FHL1P39521 936 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B NDE1P40215 560 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B SCY1P53009 804 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B CAF130P53280 1122 aaPredicted RBP3.33□□□□□ -1.88
YLR227W-BYLR227W-B SMM1P53720 384 aaKnown RBP3.33□□□□□ -1.88
YLR227W-BYLR227W-B SLU7Q02775 382 aaKnown RBP3.33□□□□□ -1.88
YLR227W-BYLR227W-B TRM12Q04235 462 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B RUP1Q12242 671 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B HSH49Q99181 213 aaPredicted RBP3.33□□□□□ -1.88
YLR227W-BYLR227W-B YLR149CQ99296 730 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B RAD52P06778 471 aaKnown RBP3.33□□□□□ -1.88
YLR227W-BYLR227W-B YML002WP0CF17 737 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B MIG1P27705 504 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B UBC6P33296 250 aaPredicted RBP3.33□□□□□ -1.88
YLR227W-BYLR227W-B CTF8P38877 133 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B RET3P53600 189 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B YNR064CP53750 290 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B BOP3P53958 396 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B CRZ1P53968 678 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B YPL067CQ02754 198 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B YMR187CQ03236 431 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B POP5P28005 173 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B SUA7P29055 345 aaPredicted RBP3.33□□□□□ -1.88
YLR227W-BYLR227W-B EAP1P36041 632 aaKnown RBP3.33□□□□□ -1.88
YLR227W-BYLR227W-B CHK1P38147 527 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B UBA4P38820 440 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B YJL068CP40363 299 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B PLB2Q03674 706 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B TDA6Q06466 467 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B RIB2Q12362 591 aaKnown RBP3.33□□□□□ -1.88
YLR227W-BYLR227W-B GPP1P41277 250 aaKnown RBP3.33□□□□□ -1.88
YLR227W-BYLR227W-B KAR5Q04746 504 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B YLL007CQ07799 665 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B RSC58Q07979 502 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B RSA1Q08932 381 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B AVL9Q12500 764 aa3.33□□□□□ -1.88
YLR227W-BYLR227W-B PDE2P06776 526 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B NAM2P11325 894 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B YBR284WP38150 797 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B AVT1P47082 602 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B ATP22P50273 684 aaPredicted RBP3.32□□□□□ -1.88
YLR227W-BYLR227W-B GIM3P53900 129 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B CSI2Q08054 341 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B DBF4P32325 704 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B HSL7P38274 827 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B RPP1P38786 293 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B SWD1P39706 426 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B YEL028WP39989 153 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B YRB1P41920 201 aaKnown RBP3.32□□□□□ -1.88
YLR227W-BYLR227W-B DPB11P47027 764 aaPredicted RBP3.32□□□□□ -1.88
YLR227W-BYLR227W-B YDR179W-AQ03983 463 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B GPI17Q04080 534 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B SEC10Q06245 871 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B YDL180WQ12301 547 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B SFL1P20134 766 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B OLE1P21147 510 aaKnown RBP3.32□□□□□ -1.88
YLR227W-BYLR227W-B CBP3P21560 335 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B BUD5P25300 642 aaPredicted RBP3.32□□□□□ -1.88
YLR227W-BYLR227W-B PTC6P25646 442 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B ACS2P52910 683 aaKnown RBP3.32□□□□□ -1.88
YLR227W-BYLR227W-B YNL144CP53907 740 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B RRN10P38204 145 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B SHO1P40073 367 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B PAN6P40459 309 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B MIC19P43594 170 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B YMR1P47147 688 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
YLR227W-BYLR227W-B KAP95Q06142 861 aaKnown RBP3.32□□□□□ -1.88
YLR227W-BYLR227W-B YLR177WQ06251 628 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B YPR174CQ06616 221 aaPredicted RBP3.32□□□□□ -1.88
YLR227W-BYLR227W-B ATG34Q12292 412 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B AFI1Q99222 893 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B FIG2P25653 1609 aa3.32□□□□□ -1.88
YLR227W-BYLR227W-B YMR085WP0CF18 432 aa3.31□□□□□ -1.88
YLR227W-BYLR227W-B EST1P17214 699 aaPredicted RBP3.31□□□□□ -1.88
YLR227W-BYLR227W-B SED4P25365 1065 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 72.8 ms