RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W YPR022CQ12139 1133 aa9.61□□□□□ -0.87
SHH4YLR164W YOR114WQ12219 294 aa9.61□□□□□ -0.87
SHH4YLR164W ADF1Q2V2Q1 113 aa9.61□□□□□ -0.87
SHH4YLR164W SLM5P25345 492 aaKnown RBP9.6□□□□□ -0.87
SHH4YLR164W AGP1P25376 633 aa9.6□□□□□ -0.87
SHH4YLR164W SIN4P32259 974 aa9.6□□□□□ -0.87
SHH4YLR164W NGG1P32494 702 aa9.6□□□□□ -0.87
SHH4YLR164W RRN10P38204 145 aa9.6□□□□□ -0.87
SHH4YLR164W YAL037WP39728 267 aa9.6□□□□□ -0.87
SHH4YLR164W APQ12P40532 138 aa9.6□□□□□ -0.87
SHH4YLR164W GAB1P41733 394 aa9.6□□□□□ -0.87
SHH4YLR164W MDJ2P42834 146 aa9.6□□□□□ -0.87
SHH4YLR164W PMT4P46971 762 aa9.6□□□□□ -0.87
SHH4YLR164W ILM1P47155 203 aa9.6□□□□□ -0.87
SHH4YLR164W YJR142WP47173 342 aa9.6□□□□□ -0.87
SHH4YLR164W UPF3P48412 387 aaKnown RBP9.6□□□□□ -0.87
SHH4YLR164W GET1P53192 235 aa9.6□□□□□ -0.87
SHH4YLR164W SPC2Q04969 178 aa9.6□□□□□ -0.87
SHH4YLR164W GYP1Q08484 637 aa9.6□□□□□ -0.87
SHH4YLR164W MUM3Q08750 479 aa9.6□□□□□ -0.87
SHH4YLR164W PRT1P06103 763 aaKnown RBP9.59□□□□□ -0.87
SHH4YLR164W ALG7P07286 448 aa9.59□□□□□ -0.87
SHH4YLR164W TYR1P20049 452 aa9.59□□□□□ -0.87
SHH4YLR164W SYP1P25623 870 aaKnown RBP9.59□□□□□ -0.87
SHH4YLR164W FMP46P36141 133 aaKnown RBP9.59□□□□□ -0.87
SHH4YLR164W ELO1P39540 310 aa9.59□□□□□ -0.87
SHH4YLR164W ERV46P39727 415 aa9.59□□□□□ -0.87
SHH4YLR164W DLD3P39976 496 aaKnown RBP9.59□□□□□ -0.87
SHH4YLR164W LRO1P40345 661 aa9.59□□□□□ -0.87
SHH4YLR164W SEC26P41810 973 aaKnown RBP9.59□□□□□ -0.87
SHH4YLR164W COS6P53344 381 aa9.59□□□□□ -0.87
SHH4YLR164W IRC15Q02733 499 aa9.59□□□□□ -0.87
SHH4YLR164W YML096WQ04489 525 aa9.59□□□□□ -0.87
SHH4YLR164W ROY1Q04847 553 aa9.59□□□□□ -0.87
SHH4YLR164W NMD4Q12129 218 aa9.59□□□□□ -0.87
SHH4YLR164W RPN5Q12250 445 aaKnown RBP9.59□□□□□ -0.87
SHH4YLR164W RPN6Q12377 434 aa9.59□□□□□ -0.87
SHH4YLR164W UNG1P12887 359 aa9.58□□□□□ -0.88
SHH4YLR164W YAK1P14680 807 aa9.58□□□□□ -0.88
SHH4YLR164W CMP2P14747 604 aa9.58□□□□□ -0.88
SHH4YLR164W YGL015CP33199 130 aa9.58□□□□□ -0.88
SHH4YLR164W SPO23P33757 523 aa9.58□□□□□ -0.88
SHH4YLR164W MRP8P35719 219 aa9.58□□□□□ -0.88
SHH4YLR164W NTR2P36118 322 aaPredicted RBP9.58□□□□□ -0.88
SHH4YLR164W UTH1P36135 365 aa9.58□□□□□ -0.88
SHH4YLR164W ARA1P38115 344 aa9.58□□□□□ -0.88
SHH4YLR164W LYS1P38998 373 aaRIP-Chip data9.58□□□□□ -0.88 RIP-Chip
SHH4YLR164W MTW1P39731 289 aa9.58□□□□□ -0.88
SHH4YLR164W GPI1P53306 609 aa9.58□□□□□ -0.88
SHH4YLR164W ARE2P53629 642 aaKnown RBP9.58□□□□□ -0.88
SHH4YLR164W RHO3Q00245 231 aaKnown RBP9.58□□□□□ -0.88
SHH4YLR164W MSC1Q03104 513 aa9.58□□□□□ -0.88
SHH4YLR164W MTQ2Q03920 221 aaPredicted RBP9.58□□□□□ -0.88
SHH4YLR164W PSR1Q07800 427 aa9.58□□□□□ -0.88
SHH4YLR164W THI73Q07904 523 aa9.58□□□□□ -0.88
SHH4YLR164W YPR096CO13587 100 aa9.57□□□□□ -0.88
SHH4YLR164W MST1P07236 462 aa9.57□□□□□ -0.88
SHH4YLR164W TY2A-LR1P0C2J4 438 aa9.57□□□□□ -0.88
SHH4YLR164W TY2A-FP0CX61 438 aa9.57□□□□□ -0.88
SHH4YLR164W TY2A-GR2P0CX62 438 aa9.57□□□□□ -0.88
SHH4YLR164W TOP3P13099 656 aa9.57□□□□□ -0.88
SHH4YLR164W DAP2P18962 818 aa9.57□□□□□ -0.88
SHH4YLR164W RVS161P25343 265 aaKnown RBP9.57□□□□□ -0.88
SHH4YLR164W TY2A-CP25383 438 aa9.57□□□□□ -0.88
SHH4YLR164W ATP7P30902 174 aa9.57□□□□□ -0.88
SHH4YLR164W SFC1P33303 322 aa9.57□□□□□ -0.88
SHH4YLR164W AST1P35183 429 aa9.57□□□□□ -0.88
SHH4YLR164W DIM1P41819 318 aaKnown RBP9.57□□□□□ -0.88
SHH4YLR164W KEL2P50090 882 aa9.57□□□□□ -0.88
SHH4YLR164W YGR016WP53209 190 aa9.57□□□□□ -0.88
SHH4YLR164W RTS3P53289 263 aa9.57□□□□□ -0.88
SHH4YLR164W YNR021WP53723 404 aaKnown RBP9.57□□□□□ -0.88
SHH4YLR164W MMT1Q03218 510 aa9.57□□□□□ -0.88
SHH4YLR164W TY2A-DR2Q03483 438 aa9.57□□□□□ -0.88
SHH4YLR164W HFD1Q04458 532 aa9.57□□□□□ -0.88
SHH4YLR164W SWF1Q04629 336 aa9.57□□□□□ -0.88
SHH4YLR164W VPS74Q06385 345 aa9.57□□□□□ -0.88
SHH4YLR164W RUP1Q12242 671 aa9.57□□□□□ -0.88
SHH4YLR164W YLL054CQ12244 843 aa9.57□□□□□ -0.88
SHH4YLR164W TY2A-BQ12260 438 aa9.57□□□□□ -0.88
SHH4YLR164W TY2A-OR2Q12293 438 aa9.57□□□□□ -0.88
SHH4YLR164W TY2A-DR1Q12392 438 aa9.57□□□□□ -0.88
SHH4YLR164W TY2A-OR1Q12439 438 aa9.57□□□□□ -0.88
SHH4YLR164W TY2A-DR3Q99303 438 aa9.57□□□□□ -0.88
SHH4YLR164W THP2O13539 261 aaKnown RBP9.56□□□□□ -0.88
SHH4YLR164W FUR1P18562 216 aaKnown RBP9.56□□□□□ -0.88
SHH4YLR164W SKN1P33336 771 aa9.56□□□□□ -0.88
SHH4YLR164W YHR033WP38690 423 aa9.56□□□□□ -0.88
SHH4YLR164W YHR218WP38899 603 aa9.56□□□□□ -0.88
SHH4YLR164W LTP1P40347 161 aa9.56□□□□□ -0.88
SHH4YLR164W LAS21P40367 830 aa9.56□□□□□ -0.88
SHH4YLR164W ARF3P40994 183 aaRIP-Chip data9.56□□□□□ -0.88not detected
SHH4YLR164W PRM10P42946 383 aa9.56□□□□□ -0.88
SHH4YLR164W YJL049WP47048 450 aa9.56□□□□□ -0.88
SHH4YLR164W RPM2Q02773 1202 aa9.56□□□□□ -0.88
SHH4YLR164W MUS81Q04149 632 aaPredicted RBP9.56□□□□□ -0.88
SHH4YLR164W RRP40Q08285 240 aaKnown RBP9.56□□□□□ -0.88
SHH4YLR164W RKM5Q12367 367 aa9.56□□□□□ -0.88
SHH4YLR164W MDM35O60200 86 aa9.55□□□□□ -0.88
SHH4YLR164W ATP4P05626 244 aa9.55□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms