RNA–Protein interactions for RNA: YLR097C

HRT3, Transcript of Putative SCF-ubiquitin ligase F-box protein, yeast

Gene HRT3, Length 1,035 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRT3	YLR097C	YGL138C	P53122	345 aa		4.28	□□□□□ -1.72
HRT3	YLR097C	KAP120	Q02932	1032 aa		4.28	□□□□□ -1.72
HRT3	YLR097C	ROY1	Q04847	553 aa		4.28	□□□□□ -1.72
HRT3	YLR097C	YMR317W	Q04893	1140 aa		4.28	□□□□□ -1.72
HRT3	YLR097C	ERP1	Q05359	219 aa	Known RBP	4.28	□□□□□ -1.72
HRT3	YLR097C	TIP41	Q12199	356 aa		4.28	□□□□□ -1.72
HRT3	YLR097C	RPL15A	P05748	204 aa	Known RBP	4.27	□□□□□ -1.73
HRT3	YLR097C	PRO3	P32263	286 aa	Known RBP	4.27	□□□□□ -1.73
HRT3	YLR097C	NIP100	P33420	868 aa		4.27	□□□□□ -1.73
HRT3	YLR097C	MEP2	P41948	499 aa		4.27	□□□□□ -1.73
HRT3	YLR097C	GWT1	P47026	490 aa		4.27	□□□□□ -1.73
HRT3	YLR097C	COS5	P47187	383 aa		4.27	□□□□□ -1.73
HRT3	YLR097C	BNI5	P53890	448 aa	Known RBP	4.27	□□□□□ -1.73
HRT3	YLR097C	RMT2	Q03305	412 aa		4.27	□□□□□ -1.73
HRT3	YLR097C	DON1	Q05610	365 aa		4.27	□□□□□ -1.73
HRT3	YLR097C	COS7	Q07788	383 aa		4.27	□□□□□ -1.73
HRT3	YLR097C	HSP42	Q12329	375 aa		4.27	□□□□□ -1.73
HRT3	YLR097C	ISA2	Q12425	185 aa		4.27	□□□□□ -1.73
HRT3	YLR097C	ERP4	Q12450	207 aa		4.27	□□□□□ -1.73
HRT3	YLR097C	RRD2	Q12461	358 aa		4.27	□□□□□ -1.73
HRT3	YLR097C	AFI1	Q99222	893 aa		4.27	□□□□□ -1.73
HRT3	YLR097C	RIP1	P08067	215 aa		4.26	□□□□□ -1.73
HRT3	YLR097C	MTC4	P38335	694 aa	Known RBP	4.26	□□□□□ -1.73
HRT3	YLR097C	MDM31	P38880	579 aa		4.26	□□□□□ -1.73
HRT3	YLR097C	ALG8	P40351	577 aa		4.26	□□□□□ -1.73
HRT3	YLR097C	YGL260W	P53056	76 aa		4.26	□□□□□ -1.73
HRT3	YLR097C	DSL1	P53847	754 aa		4.26	□□□□□ -1.73
HRT3	YLR097C	ERB1	Q04660	807 aa	Known RBP	4.26	□□□□□ -1.73
HRT3	YLR097C	SET6	Q12529	373 aa		4.26	□□□□□ -1.73
HRT3	YLR097C	RPL20A	P0CX23	172 aa	Known RBP	4.25	□□□□□ -1.73
HRT3	YLR097C	RPL20B	P0CX24	172 aa	Predicted RBP	4.25	□□□□□ -1.73
HRT3	YLR097C	SNT1	P25357	1226 aa		4.25	□□□□□ -1.73
HRT3	YLR097C	YCR022C	P25620	114 aa		4.25	□□□□□ -1.73
HRT3	YLR097C	PRP21	P32524	280 aa	Predicted RBP	4.25	□□□□□ -1.73
HRT3	YLR097C	TFB1	P32776	642 aa		4.25	□□□□□ -1.73
HRT3	YLR097C	PXA2	P34230	853 aa		4.25	□□□□□ -1.73
HRT3	YLR097C	FRE2	P36033	711 aa		4.25	□□□□□ -1.73
HRT3	YLR097C	PIM1	P36775	1133 aa		4.25	□□□□□ -1.73
HRT3	YLR097C	DHH1	P39517	506 aa	Known RBP	4.25	□□□□□ -1.73
HRT3	YLR097C	RPH1	P39956	796 aa		4.25	□□□□□ -1.73
HRT3	YLR097C	HAT2	P39984	401 aa		4.25	□□□□□ -1.73
HRT3	YLR097C	ISC1	P40015	477 aa	Known RBP	4.25	□□□□□ -1.73
HRT3	YLR097C	RPR2	P40571	144 aa		4.25	□□□□□ -1.73
HRT3	YLR097C	YFR016C	P43597	1233 aa	Known RBP	4.25	□□□□□ -1.73
HRT3	YLR097C	OGG1	P53397	376 aa	Predicted RBP	4.25	□□□□□ -1.73
HRT3	YLR097C	SKO1	Q02100	647 aa		4.25	□□□□□ -1.73
HRT3	YLR097C	HSP31	Q04432	237 aa		4.25	□□□□□ -1.73
HRT3	YLR097C	AYT1	Q12226	474 aa		4.25	□□□□□ -1.73
HRT3	YLR097C	SMC6	Q12749	1114 aa		4.25	□□□□□ -1.73
HRT3	YLR097C	ISN1	Q99312	450 aa		4.25	□□□□□ -1.73
HRT3	YLR097C	YLR278C	Q05854	1341 aa		4.24	□□□□□ -1.73
HRT3	YLR097C	ATR1	P13090	542 aa		4.24	□□□□□ -1.73
HRT3	YLR097C	CLB1	P24868	471 aa		4.24	□□□□□ -1.73
HRT3	YLR097C	YUR1	P26725	428 aa		4.24	□□□□□ -1.73
HRT3	YLR097C	URA7	P28274	579 aa	Known RBP	4.24	□□□□□ -1.73
HRT3	YLR097C	VMA8	P32610	256 aa	Known RBP	4.24	□□□□□ -1.73
HRT3	YLR097C	PMU1	P36069	295 aa		4.24	□□□□□ -1.73
HRT3	YLR097C	SRP72	P38688	640 aa	Known RBP	4.24	□□□□□ -1.73
HRT3	YLR097C	CCT2	P39076	527 aa	Known RBP	4.24	□□□□□ -1.73
HRT3	YLR097C	SCS3	P53012	380 aa		4.24	□□□□□ -1.73
HRT3	YLR097C	PNG1	Q02890	363 aa		4.24	□□□□□ -1.73
HRT3	YLR097C	VAM3	Q12241	283 aa		4.24	□□□□□ -1.73
HRT3	YLR097C	YAR066W	P0CX18	203 aa		4.23	□□□□□ -1.73
HRT3	YLR097C	YHR214W	P0CX19	203 aa		4.23	□□□□□ -1.73
HRT3	YLR097C	CRM1	P30822	1084 aa	Known RBP	4.23	□□□□□ -1.73
HRT3	YLR097C	ATS1	P31386	333 aa		4.23	□□□□□ -1.73
HRT3	YLR097C	FMP46	P36141	133 aa	Known RBP	4.23	□□□□□ -1.73
HRT3	YLR097C	RPS0B	P46654	252 aa	Known RBP	4.23	□□□□□ -1.73
HRT3	YLR097C	KTR5	P53966	522 aa	Predicted RBP	4.23	□□□□□ -1.73
HRT3	YLR097C	PPT2	Q12036	173 aa		4.23	□□□□□ -1.73
HRT3	YLR097C	YCR100C	P25606	316 aa		4.22	□□□□□ -1.73
HRT3	YLR097C	KRE2	P27809	442 aa		4.22	□□□□□ -1.73
HRT3	YLR097C	NDI1	P32340	513 aa		4.22	□□□□□ -1.73
HRT3	YLR097C	LOS1	P33418	1100 aa	Predicted RBP	4.22	□□□□□ -1.73
HRT3	YLR097C	APE3	P37302	537 aa	Known RBP	4.22	□□□□□ -1.73
HRT3	YLR097C	YJL213W	P40896	331 aa		4.22	□□□□□ -1.73
HRT3	YLR097C	CAK1	P43568	368 aa	Predicted RBP	4.22	□□□□□ -1.73
HRT3	YLR097C	YDR387C	Q04162	555 aa		4.22	□□□□□ -1.73
HRT3	YLR097C	YLR345W	Q06137	509 aa		4.22	□□□□□ -1.73
HRT3	YLR097C	GDH1	P07262	454 aa	Known RBP	4.21	□□□□□ -1.74
HRT3	YLR097C	MCK1	P21965	375 aa	Known RBP	4.21	□□□□□ -1.74
HRT3	YLR097C	PUT3	P25502	979 aa	Predicted RBP	4.21	□□□□□ -1.74
HRT3	YLR097C	ERV1	P27882	189 aa		4.21	□□□□□ -1.74
HRT3	YLR097C	SIN4	P32259	974 aa		4.21	□□□□□ -1.74
HRT3	YLR097C	APE2	P32454	952 aa	Known RBP	4.21	□□□□□ -1.74
HRT3	YLR097C	HIR2	P32480	875 aa		4.21	□□□□□ -1.74
HRT3	YLR097C	MMS4	P38257	691 aa		4.21	□□□□□ -1.74
HRT3	YLR097C	ZIM17	P42844	174 aa		4.21	□□□□□ -1.74
HRT3	YLR097C	YJR011C	P47086	261 aa	Predicted RBP	4.21	□□□□□ -1.74
HRT3	YLR097C	ECM27	P47144	725 aa		4.21	□□□□□ -1.74
HRT3	YLR097C	YML6	P51998	286 aa		4.21	□□□□□ -1.74
HRT3	YLR097C	COS10	P52924	374 aa		4.21	□□□□□ -1.74
HRT3	YLR097C	ART5	P53244	586 aa	Known RBP	4.21	□□□□□ -1.74
HRT3	YLR097C	PCP1	P53259	346 aa		4.21	□□□□□ -1.74
HRT3	YLR097C	YIF1	P53845	314 aa	Known RBP	4.21	□□□□□ -1.74
HRT3	YLR097C	ODC1	Q03028	310 aa		4.21	□□□□□ -1.74
HRT3	YLR097C	AIM32	Q04689	311 aa		4.21	□□□□□ -1.74
HRT3	YLR097C	CTF3	Q12748	733 aa		4.21	□□□□□ -1.74
HRT3	YLR097C	HIS4	P00815	799 aa	Known RBP	4.2	□□□□□ -1.74
HRT3	YLR097C	HEM2	P05373	342 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms