RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C DAL81P21657 970 aa3.18□□□□□ -1.9
SDO1YLR022C CTM1P38818 585 aa3.18□□□□□ -1.9
SDO1YLR022C YJR030CP47101 745 aa3.18□□□□□ -1.9
SDO1YLR022C YPT11P48559 417 aa3.18□□□□□ -1.9
SDO1YLR022C NBP35P52920 328 aa3.18□□□□□ -1.9
SDO1YLR022C YGR079WP53249 370 aa3.18□□□□□ -1.9
SDO1YLR022C YPR003CP53394 754 aa3.18□□□□□ -1.9
SDO1YLR022C SPG3Q04398 127 aaPredicted RBP3.18□□□□□ -1.9
SDO1YLR022C STP3Q05937 343 aa3.18□□□□□ -1.9
SDO1YLR022C TSR2Q06672 205 aaKnown RBP3.18□□□□□ -1.9
SDO1YLR022C ATG10Q07879 167 aa3.18□□□□□ -1.9
SDO1YLR022C NEW1Q08972 1196 aaKnown RBP3.18□□□□□ -1.9
SDO1YLR022C ERP4Q12450 207 aa3.18□□□□□ -1.9
SDO1YLR022C COX1P00401 534 aa3.17□□□□□ -1.9
SDO1YLR022C PHO81P17442 1178 aa3.17□□□□□ -1.9
SDO1YLR022C PPH21P23594 369 aa3.17□□□□□ -1.9
SDO1YLR022C CBF2P32504 956 aa3.17□□□□□ -1.9
SDO1YLR022C MUD1P32605 298 aaKnown RBP3.17□□□□□ -1.9
SDO1YLR022C PMT1P33775 817 aa3.17□□□□□ -1.9
SDO1YLR022C SCO2P38072 301 aa3.17□□□□□ -1.9
SDO1YLR022C OPY1P38271 328 aa3.17□□□□□ -1.9
SDO1YLR022C PHM8P40025 321 aa3.17□□□□□ -1.9
SDO1YLR022C CAB2P40506 365 aa3.17□□□□□ -1.9
SDO1YLR022C SAP185P40856 1058 aa3.17□□□□□ -1.9
SDO1YLR022C SRB7P47822 140 aa3.17□□□□□ -1.9
SDO1YLR022C EMC4P53073 190 aa3.17□□□□□ -1.9
SDO1YLR022C NNF2P53253 936 aa3.17□□□□□ -1.9
SDO1YLR022C TRM112P53738 135 aaPredicted RBP3.17□□□□□ -1.9
SDO1YLR022C YNL144CP53907 740 aa3.17□□□□□ -1.9
SDO1YLR022C EGD1Q02642 157 aaKnown RBP3.17□□□□□ -1.9
SDO1YLR022C YPL108WQ02872 168 aaPredicted RBP3.17□□□□□ -1.9
SDO1YLR022C PEX25Q02969 394 aa3.17□□□□□ -1.9
SDO1YLR022C SPC19Q03954 165 aa3.17□□□□□ -1.9
SDO1YLR022C NKP2Q06162 153 aa3.17□□□□□ -1.9
SDO1YLR022C CSR1Q06705 408 aaKnown RBP3.17□□□□□ -1.9
SDO1YLR022C OPY2Q06810 360 aa3.17□□□□□ -1.9
SDO1YLR022C YOL114CQ12322 202 aa3.17□□□□□ -1.9
SDO1YLR022C HSP42Q12329 375 aa3.17□□□□□ -1.9
SDO1YLR022C BIK1P11709 440 aa3.16□□□□□ -1.9
SDO1YLR022C CKA2P19454 339 aa3.16□□□□□ -1.9
SDO1YLR022C VPS1P21576 704 aaKnown RBP3.16□□□□□ -1.9
SDO1YLR022C YCR043CP25361 127 aa3.16□□□□□ -1.9
SDO1YLR022C ADH7P25377 361 aa3.16□□□□□ -1.9
SDO1YLR022C MKK1P32490 508 aa3.16□□□□□ -1.9
SDO1YLR022C BLI1P35727 113 aa3.16□□□□□ -1.9
SDO1YLR022C ARC40P38328 384 aaKnown RBP3.16□□□□□ -1.9
SDO1YLR022C YHL041WP38730 149 aa3.16□□□□□ -1.9
SDO1YLR022C GPI16P38875 610 aa3.16□□□□□ -1.9
SDO1YLR022C VPS41P38959 992 aa3.16□□□□□ -1.9
SDO1YLR022C TIM17P39515 158 aa3.16□□□□□ -1.9
SDO1YLR022C HIS6P40545 261 aa3.16□□□□□ -1.9
SDO1YLR022C TEP1P53916 434 aa3.16□□□□□ -1.9
SDO1YLR022C PDR8Q06149 701 aa3.16□□□□□ -1.9
SDO1YLR022C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
SDO1YLR022C SIL1Q08199 421 aa3.16□□□□□ -1.9
SDO1YLR022C GSH2Q08220 491 aa3.16□□□□□ -1.9
SDO1YLR022C ABP140Q08641 628 aaKnown RBP3.16□□□□□ -1.9
SDO1YLR022C APC5Q08683 685 aa3.16□□□□□ -1.9
SDO1YLR022C HUA2Q12134 243 aa3.16□□□□□ -1.9
SDO1YLR022C NBL1Q3E7Y6 73 aa3.16□□□□□ -1.9
SDO1YLR022C YFL068WP0CX99 160 aa3.15□□□□□ -1.91
SDO1YLR022C YLL066W-AP0CY00 160 aa3.15□□□□□ -1.91
SDO1YLR022C YLL067W-AP0CY01 160 aa3.15□□□□□ -1.91
SDO1YLR022C SNT1P25357 1226 aa3.15□□□□□ -1.91
SDO1YLR022C RRT12P25381 491 aa3.15□□□□□ -1.91
SDO1YLR022C GEX1P25596 615 aa3.15□□□□□ -1.91
SDO1YLR022C DBF20P32328 564 aa3.15□□□□□ -1.91
SDO1YLR022C GEX2P36173 615 aa3.15□□□□□ -1.91
SDO1YLR022C TMA108P40462 946 aa3.15□□□□□ -1.91
SDO1YLR022C TES1P41903 349 aaKnown RBP3.15□□□□□ -1.91
SDO1YLR022C MSY1P48527 492 aa3.15□□□□□ -1.91
SDO1YLR022C IMA1P53051 589 aa3.15□□□□□ -1.91
SDO1YLR022C PRM1P53835 661 aa3.15□□□□□ -1.91
SDO1YLR022C YML131WQ03102 365 aa3.15□□□□□ -1.91
SDO1YLR022C CAC2Q04199 468 aa3.15□□□□□ -1.91
SDO1YLR022C IWR1Q07532 353 aaPredicted RBP3.15□□□□□ -1.91
SDO1YLR022C YDL218WQ07629 317 aa3.15□□□□□ -1.91
SDO1YLR022C YLR012CQ07927 99 aa3.15□□□□□ -1.91
SDO1YLR022C MCH4Q08268 501 aa3.15□□□□□ -1.91
SDO1YLR022C BAG7Q12128 409 aa3.15□□□□□ -1.91
SDO1YLR022C YLR046CQ12253 270 aa3.15□□□□□ -1.91
SDO1YLR022C MDN1Q12019 4910 aaKnown RBP3.14□□□□□ -1.91
SDO1YLR022C SSA3P09435 649 aaKnown RBP3.14□□□□□ -1.91
SDO1YLR022C YKR104WP0CE69 306 aa3.14□□□□□ -1.91
SDO1YLR022C YCR006CP25350 157 aa3.14□□□□□ -1.91
SDO1YLR022C SIN4P32259 974 aa3.14□□□□□ -1.91
SDO1YLR022C SWI3P32591 825 aa3.14□□□□□ -1.91
SDO1YLR022C EXO84P38261 753 aa3.14□□□□□ -1.91
SDO1YLR022C URA8P38627 578 aaPredicted RBP3.14□□□□□ -1.91
SDO1YLR022C YAT2P40017 923 aa3.14□□□□□ -1.91
SDO1YLR022C PCL6P40038 420 aa3.14□□□□□ -1.91
SDO1YLR022C SEC24P40482 926 aaKnown RBP3.14□□□□□ -1.91
SDO1YLR022C CTK3P46963 296 aaPredicted RBP3.14□□□□□ -1.91
SDO1YLR022C RTT101P47050 842 aa3.14□□□□□ -1.91
SDO1YLR022C RSC1P53236 928 aa3.14□□□□□ -1.91
SDO1YLR022C CPR6P53691 371 aaKnown RBP3.14□□□□□ -1.91
SDO1YLR022C INN1P53901 409 aa3.14□□□□□ -1.91
SDO1YLR022C YNL040WP53960 456 aaPredicted RBP3.14□□□□□ -1.91
SDO1YLR022C ATG21Q02887 496 aa3.14□□□□□ -1.91
SDO1YLR022C PIR1Q03178 341 aa3.14□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms