RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W HNM1P19807 563 aa4.29□□□□□ -1.72
SOF1YLL011W RDS1P25611 832 aa4.29□□□□□ -1.72
SOF1YLL011W BEM1P29366 551 aa4.29□□□□□ -1.72
SOF1YLL011W ASC1P38011 319 aaKnown RBP4.29□□□□□ -1.72
SOF1YLL011W DBP8P38719 431 aa4.29□□□□□ -1.72
SOF1YLL011W PIH1P38768 344 aa4.29□□□□□ -1.72
SOF1YLL011W CTM1P38818 585 aa4.29□□□□□ -1.72
SOF1YLL011W RIX1P38883 763 aaPredicted RBP4.29□□□□□ -1.72
SOF1YLL011W CIN1P40987 1014 aa4.29□□□□□ -1.72
SOF1YLL011W ATG27P46989 271 aa4.29□□□□□ -1.72
SOF1YLL011W KTR5P53966 522 aaPredicted RBP4.29□□□□□ -1.72
SOF1YLL011W SMA1Q02651 245 aa4.29□□□□□ -1.72
SOF1YLL011W RRB1Q04225 511 aaKnown RBP4.29□□□□□ -1.72
SOF1YLL011W ARO10Q06408 635 aa4.29□□□□□ -1.72
SOF1YLL011W ARV1Q06541 321 aa4.29□□□□□ -1.72
SOF1YLL011W ECM30Q06673 1274 aa4.29□□□□□ -1.72
SOF1YLL011W CYK3Q07533 885 aa4.29□□□□□ -1.72
SOF1YLL011W MED7Q08278 222 aa4.29□□□□□ -1.72
SOF1YLL011W RPS10AQ08745 105 aaPredicted RBP4.29□□□□□ -1.72
SOF1YLL011W LEU4P06208 619 aaKnown RBP4.28□□□□□ -1.72
SOF1YLL011W PUT2P07275 575 aa4.28□□□□□ -1.72
SOF1YLL011W PMR1P13586 950 aa4.28□□□□□ -1.72
SOF1YLL011W KRS1P15180 591 aaKnown RBP4.28□□□□□ -1.72
SOF1YLL011W PTK1P36002 662 aaPredicted RBP4.28□□□□□ -1.72
SOF1YLL011W LIN1P38852 340 aaPredicted RBP4.28□□□□□ -1.72
SOF1YLL011W ROG1P53118 685 aa4.28□□□□□ -1.72
SOF1YLL011W ERG26P53199 349 aaKnown RBP4.28□□□□□ -1.72
SOF1YLL011W LSB1P53281 241 aa4.28□□□□□ -1.72
SOF1YLL011W ATG4P53867 494 aa4.28□□□□□ -1.72
SOF1YLL011W RSM23Q01163 450 aa4.28□□□□□ -1.72
SOF1YLL011W EMI2Q04409 500 aaKnown RBP4.28□□□□□ -1.72
SOF1YLL011W RAV1P47104 1357 aa4.27□□□□□ -1.73
SOF1YLL011W GPH1P06738 902 aaKnown RBP4.27□□□□□ -1.73
SOF1YLL011W SAG1P20840 650 aa4.27□□□□□ -1.73
SOF1YLL011W DMC1P25453 334 aa4.27□□□□□ -1.73
SOF1YLL011W MRPL9P31334 269 aa4.27□□□□□ -1.73
SOF1YLL011W COY1P34237 679 aa4.27□□□□□ -1.73
SOF1YLL011W KEL1P38853 1164 aaKnown RBP4.27□□□□□ -1.73
SOF1YLL011W MNL1P38888 796 aa4.27□□□□□ -1.73
SOF1YLL011W SKN7P38889 622 aa4.27□□□□□ -1.73
SOF1YLL011W MBB1P39534 108 aa4.27□□□□□ -1.73
SOF1YLL011W RPS10BP46784 105 aaKnown RBP4.27□□□□□ -1.73
SOF1YLL011W PNC1P53184 216 aaKnown RBP4.27□□□□□ -1.73
SOF1YLL011W WAR1Q03631 944 aa4.27□□□□□ -1.73
SOF1YLL011W EKI1Q03764 534 aa4.27□□□□□ -1.73
SOF1YLL011W SMA2Q04658 369 aa4.27□□□□□ -1.73
SOF1YLL011W HRD3Q05787 833 aa4.27□□□□□ -1.73
SOF1YLL011W YDL057WQ07379 328 aa4.27□□□□□ -1.73
SOF1YLL011W AHA1Q12449 350 aaKnown RBP4.27□□□□□ -1.73
SOF1YLL011W STE2D6VTK4 431 aa4.26□□□□□ -1.73
SOF1YLL011W TDH1P00360 332 aaKnown RBP4.26□□□□□ -1.73
SOF1YLL011W CDC37P06101 506 aaKnown RBP4.26□□□□□ -1.73
SOF1YLL011W WHI2P12611 486 aa4.26□□□□□ -1.73
SOF1YLL011W PET123P17558 318 aa4.26□□□□□ -1.73
SOF1YLL011W ERG4P25340 473 aa4.26□□□□□ -1.73
SOF1YLL011W PTC6P25646 442 aa4.26□□□□□ -1.73
SOF1YLL011W PMI40P29952 429 aaKnown RBP4.26□□□□□ -1.73
SOF1YLL011W YBR139WP38109 508 aa4.26□□□□□ -1.73
SOF1YLL011W VHC1P38329 1120 aa4.26□□□□□ -1.73
SOF1YLL011W PCA1P38360 1216 aa4.26□□□□□ -1.73
SOF1YLL011W LSC1P53598 329 aaKnown RBP4.26□□□□□ -1.73
SOF1YLL011W SLG1P54867 378 aa4.26□□□□□ -1.73
SOF1YLL011W PFA5Q03289 374 aa4.26□□□□□ -1.73
SOF1YLL011W NDL1Q06568 189 aa4.26□□□□□ -1.73
SOF1YLL011W YPR172WQ06608 200 aa4.26□□□□□ -1.73
SOF1YLL011W ETT1Q08421 412 aaKnown RBP4.26□□□□□ -1.73
SOF1YLL011W LEA1Q08963 238 aaPredicted RBP4.26□□□□□ -1.73
SOF1YLL011W TY3A-GQ12173 290 aa4.26□□□□□ -1.73
SOF1YLL011W RUD3Q12234 484 aaKnown RBP4.26□□□□□ -1.73
SOF1YLL011W YOR012WQ12351 137 aa4.26□□□□□ -1.73
SOF1YLL011W ZPS1Q12512 249 aa4.26□□□□□ -1.73
SOF1YLL011W TY3A-IQ99219 290 aa4.26□□□□□ -1.73
SOF1YLL011W RTC1Q08281 1341 aa4.26□□□□□ -1.73
SOF1YLL011W QCR6P00127 147 aa4.25□□□□□ -1.73
SOF1YLL011W COX3P00420 269 aa4.25□□□□□ -1.73
SOF1YLL011W RHO2P06781 192 aa4.25□□□□□ -1.73
SOF1YLL011W RIP1P08067 215 aa4.25□□□□□ -1.73
SOF1YLL011W CHO1P08456 276 aa4.25□□□□□ -1.73
SOF1YLL011W YMR085WP0CF18 432 aa4.25□□□□□ -1.73
SOF1YLL011W SAM1P10659 382 aaKnown RBP4.25□□□□□ -1.73
SOF1YLL011W UNG1P12887 359 aa4.25□□□□□ -1.73
SOF1YLL011W ALG1P16661 449 aa4.25□□□□□ -1.73
SOF1YLL011W GEX1P25596 615 aa4.25□□□□□ -1.73
SOF1YLL011W KRE2P27809 442 aa4.25□□□□□ -1.73
SOF1YLL011W NTG1P31378 399 aa4.25□□□□□ -1.73
SOF1YLL011W GLG1P36143 616 aa4.25□□□□□ -1.73
SOF1YLL011W MRPL37P36532 105 aa4.25□□□□□ -1.73
SOF1YLL011W ATP3P38077 311 aaKnown RBP4.25□□□□□ -1.73
SOF1YLL011W YHR210CP38893 341 aa4.25□□□□□ -1.73
SOF1YLL011W YER130CP39959 443 aa4.25□□□□□ -1.73
SOF1YLL011W AIM20P40451 204 aa4.25□□□□□ -1.73
SOF1YLL011W YGR126WP53274 230 aa4.25□□□□□ -1.73
SOF1YLL011W YPR003CP53394 754 aa4.25□□□□□ -1.73
SOF1YLL011W YDR541CQ03049 344 aa4.25□□□□□ -1.73
SOF1YLL011W YMR178WQ03219 274 aaKnown RBP4.25□□□□□ -1.73
SOF1YLL011W GFD1Q04839 188 aaKnown RBP4.25□□□□□ -1.73
SOF1YLL011W YLR297WQ05899 129 aa4.25□□□□□ -1.73
SOF1YLL011W STE23Q06010 1027 aa4.25□□□□□ -1.73
SOF1YLL011W ULA1Q12059 462 aa4.25□□□□□ -1.73
SOF1YLL011W SUP35P05453 685 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 78.1 ms