RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeastyeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR1YKR101W RRF1P38771 230 aa4.53□□□□□ -1.68
SIR1YKR101W ATF1P40353 525 aa4.53□□□□□ -1.68
SIR1YKR101W VHS2P40463 436 aa4.53□□□□□ -1.68
SIR1YKR101W OCA1P50946 238 aaPredicted RBP4.53□□□□□ -1.68
SIR1YKR101W YPL014WQ02606 381 aa4.53□□□□□ -1.68
SIR1YKR101W YDR341CQ05506 607 aaKnown RBP4.53□□□□□ -1.68
SIR1YKR101W DBP9Q06218 594 aaKnown RBP4.53□□□□□ -1.68
SIR1YKR101W YDL218WQ07629 317 aa4.53□□□□□ -1.68
SIR1YKR101W APL5Q08951 932 aaKnown RBP4.53□□□□□ -1.68
SIR1YKR101W PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.53□□□□□ -1.68not detected
SIR1YKR101W NUP159P40477 1460 aa4.52□□□□□ -1.69
SIR1YKR101W EDE1P34216 1381 aa4.52□□□□□ -1.69
SIR1YKR101W YPR089WO13585 888 aa4.52□□□□□ -1.69
SIR1YKR101W SUC2P00724 532 aa4.52□□□□□ -1.69
SIR1YKR101W STF1P01098 86 aa4.52□□□□□ -1.69
SIR1YKR101W GLK1P17709 500 aaKnown RBP4.52□□□□□ -1.69
SIR1YKR101W PPZ1P26570 692 aa4.52□□□□□ -1.69
SIR1YKR101W BEM1P29366 551 aa4.52□□□□□ -1.69
SIR1YKR101W SIN4P32259 974 aa4.52□□□□□ -1.69
SIR1YKR101W PHO90P39535 881 aa4.52□□□□□ -1.69
SIR1YKR101W QRI1P43123 477 aaKnown RBP4.52□□□□□ -1.69
SIR1YKR101W YJR154WP47181 346 aa4.52□□□□□ -1.69
SIR1YKR101W ATP23P53722 227 aa4.52□□□□□ -1.69
SIR1YKR101W SHR3Q02774 210 aa4.52□□□□□ -1.69
SIR1YKR101W RKM1Q08961 583 aaPredicted RBP4.52□□□□□ -1.69
SIR1YKR101W VTH1P40438 1549 aa4.52□□□□□ -1.69
SIR1YKR101W VTH2P40890 1549 aa4.52□□□□□ -1.69
SIR1YKR101W YMR085WP0CF18 432 aa4.51□□□□□ -1.69
SIR1YKR101W PEP5P12868 1029 aa4.51□□□□□ -1.69
SIR1YKR101W PHO84P25297 587 aaKnown RBP4.51□□□□□ -1.69
SIR1YKR101W VHC1P38329 1120 aa4.51□□□□□ -1.69
SIR1YKR101W CCT2P39076 527 aaKnown RBP4.51□□□□□ -1.69
SIR1YKR101W RPS0BP46654 252 aaKnown RBP4.51□□□□□ -1.69
SIR1YKR101W UBP8P50102 471 aa4.51□□□□□ -1.69
SIR1YKR101W SOL4P53315 255 aa4.51□□□□□ -1.69
SIR1YKR101W YNR068CP53754 272 aa4.51□□□□□ -1.69
SIR1YKR101W NUP100Q02629 959 aa4.51□□□□□ -1.69
SIR1YKR101W PPM1Q04081 328 aa4.51□□□□□ -1.69
SIR1YKR101W CAC2Q04199 468 aa4.51□□□□□ -1.69
SIR1YKR101W OSW1Q08692 278 aa4.51□□□□□ -1.69
SIR1YKR101W PNS1Q12412 539 aa4.51□□□□□ -1.69
SIR1YKR101W SNT2P53127 1403 aa4.51□□□□□ -1.69
SIR1YKR101W RPA190P10964 1664 aaKnown RBP4.51□□□□□ -1.69
SIR1YKR101W ESC1Q03661 1658 aaKnown RBP4.51□□□□□ -1.69
SIR1YKR101W MES1P00958 751 aaKnown RBP4.51□□□□□ -1.69
SIR1YKR101W TYR1P20049 452 aa4.51□□□□□ -1.69
SIR1YKR101W KRE2P27809 442 aa4.51□□□□□ -1.69
SIR1YKR101W MCM4P30665 933 aaKnown RBP4.51□□□□□ -1.69
SIR1YKR101W PRP21P32524 280 aaPredicted RBP4.51□□□□□ -1.69
SIR1YKR101W STV1P37296 890 aa4.51□□□□□ -1.69
SIR1YKR101W PCA1P38360 1216 aa4.51□□□□□ -1.69
SIR1YKR101W TFG2P41896 400 aaPredicted RBP4.51□□□□□ -1.69
SIR1YKR101W GAT1P43574 510 aa4.51□□□□□ -1.69
SIR1YKR101W LGE1Q02796 332 aaKnown RBP4.51□□□□□ -1.69
SIR1YKR101W ARP10Q04549 284 aa4.51□□□□□ -1.69
SIR1YKR101W RDR1Q08904 546 aa4.51□□□□□ -1.69
SIR1YKR101W RRI1Q12468 440 aa4.51□□□□□ -1.69
SIR1YKR101W MTR10Q99189 972 aa4.51□□□□□ -1.69
SIR1YKR101W BAR1P12630 587 aa4.5□□□□□ -1.69
SIR1YKR101W SRV2P17555 526 aaKnown RBP4.5□□□□□ -1.69
SIR1YKR101W RHB1P25378 209 aa4.5□□□□□ -1.69
SIR1YKR101W COQ3P27680 312 aa4.5□□□□□ -1.69
SIR1YKR101W YEL043WP32618 956 aa4.5□□□□□ -1.69
SIR1YKR101W MMS4P38257 691 aa4.5□□□□□ -1.69
SIR1YKR101W CAR1P00812 333 aaKnown RBP4.49□□□□□ -1.69
SIR1YKR101W RPB8P20436 146 aa4.49□□□□□ -1.69
SIR1YKR101W LAG1P38703 411 aa4.49□□□□□ -1.69
SIR1YKR101W CHS6P40955 746 aa4.49□□□□□ -1.69
SIR1YKR101W NCS2P53923 493 aaPredicted RBP4.49□□□□□ -1.69
SIR1YKR101W PRO2P54885 456 aaKnown RBP4.49□□□□□ -1.69
SIR1YKR101W RHO4Q00246 291 aa4.49□□□□□ -1.69
SIR1YKR101W DIC1Q06143 298 aa4.49□□□□□ -1.69
SIR1YKR101W URE2P23202 354 aaKnown RBP4.49□□□□□ -1.69
SIR1YKR101W MBR1P23493 339 aa4.49□□□□□ -1.69
SIR1YKR101W WSS1P38838 269 aa4.49□□□□□ -1.69
SIR1YKR101W SHE4P51534 789 aa4.49□□□□□ -1.69
SIR1YKR101W RMD9P53140 646 aaKnown RBP4.49□□□□□ -1.69
SIR1YKR101W PDR16P53860 351 aaKnown RBP4.49□□□□□ -1.69
SIR1YKR101W POS5Q06892 414 aa4.49□□□□□ -1.69
SIR1YKR101W MED2Q12124 431 aa4.49□□□□□ -1.69
SIR1YKR101W UBX3Q12229 455 aa4.49□□□□□ -1.69
SIR1YKR101W HSP42Q12329 375 aa4.49□□□□□ -1.69
SIR1YKR101W RKM5Q12367 367 aa4.49□□□□□ -1.69
SIR1YKR101W GEA2P39993 1459 aaKnown RBP4.49□□□□□ -1.69
SIR1YKR101W YLR278CQ05854 1341 aa4.49□□□□□ -1.69
SIR1YKR101W BNR1P40450 1375 aa4.48□□□□□ -1.69
SIR1YKR101W FUN19P28003 413 aaPredicted RBP4.48□□□□□ -1.69
SIR1YKR101W YMR124WP39523 943 aaKnown RBP4.48□□□□□ -1.69
SIR1YKR101W YTA12P40341 825 aa4.48□□□□□ -1.69
SIR1YKR101W YLR112WQ12130 139 aa4.48□□□□□ -1.69
SIR1YKR101W SNQ2P32568 1501 aaKnown RBP4.47□□□□□ -1.69
SIR1YKR101W RPL6BP05739 176 aaKnown RBP4.47□□□□□ -1.69
SIR1YKR101W MRPL4P36517 319 aa4.47□□□□□ -1.69
SIR1YKR101W NMD5P46970 1048 aa4.47□□□□□ -1.69
SIR1YKR101W MPP10P47083 593 aaKnown RBP4.47□□□□□ -1.69
SIR1YKR101W RPL6AQ02326 176 aaKnown RBP4.47□□□□□ -1.69
SIR1YKR101W RSC9Q03124 581 aa4.47□□□□□ -1.69
SIR1YKR101W MCP2Q06567 569 aa4.47□□□□□ -1.69
SIR1YKR101W DRS2P39524 1355 aa4.47□□□□□ -1.69
SIR1YKR101W CRM1P30822 1084 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms