RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeastyeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPE1YKL184W RNA14P25298 677 aaKnown RBP2.39□□□□□ -2.03
SPE1YKL184W ARO2P28777 376 aaKnown RBP2.39□□□□□ -2.03
SPE1YKL184W GLC7P32598 312 aaKnown RBP2.39□□□□□ -2.03
SPE1YKL184W WBP1P33767 430 aaKnown RBP2.39□□□□□ -2.03
SPE1YKL184W MPE1P35728 441 aaKnown RBP2.39□□□□□ -2.03
SPE1YKL184W PTH1P38876 190 aaKnown RBP2.39□□□□□ -2.03
SPE1YKL184W ISC1P40015 477 aaKnown RBP2.39□□□□□ -2.03
SPE1YKL184W SPO22P40511 975 aa2.39□□□□□ -2.03
SPE1YKL184W YIL067CP40514 678 aa2.39□□□□□ -2.03
SPE1YKL184W ARF3P40994 183 aaRIP-Chip data2.39□□□□□ -2.03not detected
SPE1YKL184W AVT4P50944 713 aa2.39□□□□□ -2.03
SPE1YKL184W OCA1P50946 238 aaPredicted RBP2.39□□□□□ -2.03
SPE1YKL184W POP6P53218 158 aa2.39□□□□□ -2.03
SPE1YKL184W CAF130P53280 1122 aaPredicted RBP2.39□□□□□ -2.03
SPE1YKL184W VPS75P53853 264 aa2.39□□□□□ -2.03
SPE1YKL184W SOV1Q04748 898 aa2.39□□□□□ -2.03
SPE1YKL184W IMH1Q06704 911 aaKnown RBP2.39□□□□□ -2.03
SPE1YKL184W MUM3Q08750 479 aa2.39□□□□□ -2.03
SPE1YKL184W YPL199CQ08954 240 aa2.39□□□□□ -2.03
SPE1YKL184W RTP1Q12751 981 aa2.39□□□□□ -2.03
SPE1YKL184W RPL31BP0C2H9 113 aaKnown RBP2.38□□□□□ -2.03
SPE1YKL184W CPR4P25334 318 aa2.38□□□□□ -2.03
SPE1YKL184W ELO2P25358 347 aa2.38□□□□□ -2.03
SPE1YKL184W OCA4P25366 362 aa2.38□□□□□ -2.03
SPE1YKL184W PRD1P25375 712 aa2.38□□□□□ -2.03
SPE1YKL184W YCR100CP25606 316 aa2.38□□□□□ -2.03
SPE1YKL184W REC114P32841 428 aa2.38□□□□□ -2.03
SPE1YKL184W MUM2P38236 366 aa2.38□□□□□ -2.03
SPE1YKL184W SGN1P40561 250 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
SPE1YKL184W WWM1P43582 211 aaKnown RBP2.38□□□□□ -2.03
SPE1YKL184W GOR1P53839 350 aa2.38□□□□□ -2.03
SPE1YKL184W PNG1Q02890 363 aa2.38□□□□□ -2.03
SPE1YKL184W ODC1Q03028 310 aa2.38□□□□□ -2.03
SPE1YKL184W YDR239CQ03780 787 aa2.38□□□□□ -2.03
SPE1YKL184W RRG7Q08774 242 aaPredicted RBP2.38□□□□□ -2.03
SPE1YKL184W RKM5Q12367 367 aa2.38□□□□□ -2.03
SPE1YKL184W YML133CQ03099 1374 aa2.37□□□□□ -2.03
SPE1YKL184W YLL067CQ07888 1374 aa2.37□□□□□ -2.03
SPE1YKL184W YLL066CQ99208 1374 aa2.37□□□□□ -2.03
SPE1YKL184W RED1P14291 827 aa2.37□□□□□ -2.03
SPE1YKL184W MRE11P32829 692 aa2.37□□□□□ -2.03
SPE1YKL184W SYG1P40528 902 aa2.37□□□□□ -2.03
SPE1YKL184W SSN8P47821 323 aa2.37□□□□□ -2.03
SPE1YKL184W SRB7P47822 140 aa2.37□□□□□ -2.03
SPE1YKL184W YGL039WP53183 348 aaKnown RBP2.37□□□□□ -2.03
SPE1YKL184W SYF1Q04048 859 aaPredicted RBP2.37□□□□□ -2.03
SPE1YKL184W PDS5Q04264 1277 aa2.37□□□□□ -2.03
SPE1YKL184W YLR287CQ05881 355 aa2.37□□□□□ -2.03
SPE1YKL184W THP3Q12049 470 aaKnown RBP2.37□□□□□ -2.03
SPE1YKL184W RRG1Q12167 365 aaPredicted RBP2.37□□□□□ -2.03
SPE1YKL184W ERV2Q12284 196 aa2.37□□□□□ -2.03
SPE1YKL184W YDL007C-AQ2V2Q0 85 aa2.37□□□□□ -2.03
SPE1YKL184W CHS1P08004 1131 aa2.36□□□□□ -2.03
SPE1YKL184W SPS22P25380 463 aa2.36□□□□□ -2.03
SPE1YKL184W CST26P38226 397 aa2.36□□□□□ -2.03
SPE1YKL184W GCD10P41814 478 aa2.36□□□□□ -2.03
SPE1YKL184W PET130P47065 347 aa2.36□□□□□ -2.03
SPE1YKL184W SPC19Q03954 165 aa2.36□□□□□ -2.03
SPE1YKL184W TSR1Q07381 788 aaKnown RBP2.36□□□□□ -2.03
SPE1YKL184W TMC1Q08422 150 aaPredicted RBP2.36□□□□□ -2.03
SPE1YKL184W SEC39Q12745 709 aa2.36□□□□□ -2.03
SPE1YKL184W CKA1P15790 372 aa2.35□□□□□ -2.03
SPE1YKL184W YIM1P28625 365 aa2.35□□□□□ -2.03
SPE1YKL184W GPI10P30777 616 aa2.35□□□□□ -2.03
SPE1YKL184W ATP11P32453 318 aa2.35□□□□□ -2.03
SPE1YKL184W GYP6P32806 458 aa2.35□□□□□ -2.03
SPE1YKL184W STB6P36085 766 aa2.35□□□□□ -2.03
SPE1YKL184W YEL057CP39983 233 aa2.35□□□□□ -2.03
SPE1YKL184W GPD2P41911 440 aaKnown RBP2.35□□□□□ -2.03
SPE1YKL184W IRC6P43615 237 aa2.35□□□□□ -2.03
SPE1YKL184W RMD9P53140 646 aaKnown RBP2.35□□□□□ -2.03
SPE1YKL184W TWF1P53250 332 aa2.35□□□□□ -2.03
SPE1YKL184W TOF1P53840 1238 aa2.35□□□□□ -2.03
SPE1YKL184W DSL1P53847 754 aa2.35□□□□□ -2.03
SPE1YKL184W NCS2P53923 493 aaPredicted RBP2.35□□□□□ -2.03
SPE1YKL184W MRP51Q02950 344 aa2.35□□□□□ -2.03
SPE1YKL184W RPC11Q04307 110 aaPredicted RBP2.35□□□□□ -2.03
SPE1YKL184W RIM20Q12033 661 aa2.35□□□□□ -2.03
SPE1YKL184W RHO2P06781 192 aa2.34□□□□□ -2.03
SPE1YKL184W SAM1P10659 382 aaKnown RBP2.34□□□□□ -2.03
SPE1YKL184W SAM2P19358 384 aaKnown RBP2.34□□□□□ -2.03
SPE1YKL184W RVS161P25343 265 aaKnown RBP2.34□□□□□ -2.03
SPE1YKL184W RFS1P38234 210 aaKnown RBP2.34□□□□□ -2.03
SPE1YKL184W VTC2P43585 828 aa2.34□□□□□ -2.03
SPE1YKL184W RRT5P43607 289 aa2.34□□□□□ -2.03
SPE1YKL184W ART5P53244 586 aaKnown RBP2.34□□□□□ -2.03
SPE1YKL184W PEX25Q02969 394 aa2.34□□□□□ -2.03
SPE1YKL184W TAF11Q04226 346 aa2.34□□□□□ -2.03
SPE1YKL184W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
SPE1YKL184W BSC6Q08280 497 aa2.34□□□□□ -2.03
SPE1YKL184W TMS1Q12116 473 aa2.34□□□□□ -2.03
SPE1YKL184W PET123P17558 318 aa2.34□□□□□ -2.04
SPE1YKL184W DAL2P25335 343 aa2.34□□□□□ -2.04
SPE1YKL184W RAD14P28519 371 aa2.34□□□□□ -2.04
SPE1YKL184W AFG1P32317 509 aa2.34□□□□□ -2.04
SPE1YKL184W RIB5P38145 238 aa2.34□□□□□ -2.04
SPE1YKL184W MIX23P38162 196 aa2.34□□□□□ -2.04
SPE1YKL184W REE1P40893 198 aa2.34□□□□□ -2.04
SPE1YKL184W NCA3P46955 337 aa2.34□□□□□ -2.04
SPE1YKL184W YGL108CP53139 140 aa2.34□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms