RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W UIP5P36137 443 aa3.91□□□□□ -1.78
CTK1YKL139W ASC1P38011 319 aaKnown RBP3.91□□□□□ -1.78
CTK1YKL139W SCO2P38072 301 aa3.91□□□□□ -1.78
CTK1YKL139W PFF1P38244 976 aa3.91□□□□□ -1.78
CTK1YKL139W CFD1P40558 293 aa3.91□□□□□ -1.78
CTK1YKL139W MDE1P47095 244 aa3.91□□□□□ -1.78
CTK1YKL139W ERG13P54839 491 aaKnown RBP3.91□□□□□ -1.78
CTK1YKL139W SMA1Q02651 245 aa3.91□□□□□ -1.78
CTK1YKL139W IZH1Q03419 316 aa3.91□□□□□ -1.78
CTK1YKL139W PHO92Q06390 306 aa3.91□□□□□ -1.78
CTK1YKL139W RPL6BP05739 176 aaKnown RBP3.9□□□□□ -1.78
CTK1YKL139W PEX2P32800 271 aa3.9□□□□□ -1.78
CTK1YKL139W GYP6P32806 458 aa3.9□□□□□ -1.78
CTK1YKL139W REC114P32841 428 aa3.9□□□□□ -1.78
CTK1YKL139W PHD1P36093 366 aa3.9□□□□□ -1.78
CTK1YKL139W CBP4P37267 147 aa3.9□□□□□ -1.78
CTK1YKL139W RFC3P38629 340 aa3.9□□□□□ -1.78
CTK1YKL139W CCT2P39076 527 aaKnown RBP3.9□□□□□ -1.78
CTK1YKL139W PES4P39684 611 aa3.9□□□□□ -1.78
CTK1YKL139W RPL6AQ02326 176 aaKnown RBP3.9□□□□□ -1.78
CTK1YKL139W PDE2P06776 526 aa3.89□□□□□ -1.79
CTK1YKL139W PMR1P13586 950 aa3.89□□□□□ -1.79
CTK1YKL139W GLK1P17709 500 aaKnown RBP3.89□□□□□ -1.79
CTK1YKL139W RIM1P32445 135 aaKnown RBP3.89□□□□□ -1.79
CTK1YKL139W UTR4P32626 227 aa3.89□□□□□ -1.79
CTK1YKL139W MLH1P38920 769 aa3.89□□□□□ -1.79
CTK1YKL139W YER130CP39959 443 aa3.89□□□□□ -1.79
CTK1YKL139W YTA12P40341 825 aa3.89□□□□□ -1.79
CTK1YKL139W RTS2P40962 232 aa3.89□□□□□ -1.79
CTK1YKL139W SAS2P40963 338 aa3.89□□□□□ -1.79
CTK1YKL139W EPL1P43572 832 aa3.89□□□□□ -1.79
CTK1YKL139W FYV8P46949 817 aaKnown RBP3.89□□□□□ -1.79
CTK1YKL139W NCS2P53923 493 aaPredicted RBP3.89□□□□□ -1.79
CTK1YKL139W HSP31Q04432 237 aa3.89□□□□□ -1.79
CTK1YKL139W IVY1Q04934 453 aa3.89□□□□□ -1.79
CTK1YKL139W YDR341CQ05506 607 aaKnown RBP3.89□□□□□ -1.79
CTK1YKL139W GLO2Q05584 274 aa3.89□□□□□ -1.79
CTK1YKL139W DBP9Q06218 594 aaKnown RBP3.89□□□□□ -1.79
CTK1YKL139W PML1Q07930 204 aaPredicted RBP3.89□□□□□ -1.79
CTK1YKL139W GSH2Q08220 491 aa3.89□□□□□ -1.79
CTK1YKL139W REX3Q12090 404 aa3.89□□□□□ -1.79
CTK1YKL139W HER1Q12276 1246 aa3.89□□□□□ -1.79
CTK1YKL139W YDR061WQ12298 539 aa3.89□□□□□ -1.79
CTK1YKL139W PSY3Q12318 242 aa3.89□□□□□ -1.79
CTK1YKL139W RKM5Q12367 367 aa3.89□□□□□ -1.79
CTK1YKL139W COX3P00420 269 aa3.89□□□□□ -1.79
CTK1YKL139W SCEIP03882 235 aa3.89□□□□□ -1.79
CTK1YKL139W RPL42AP0CX27 106 aaKnown RBP3.89□□□□□ -1.79
CTK1YKL139W RPL42BP0CX28 106 aaKnown RBP3.89□□□□□ -1.79
CTK1YKL139W SOR1P35497 357 aaKnown RBP3.89□□□□□ -1.79
CTK1YKL139W YPK3P38070 525 aa3.89□□□□□ -1.79
CTK1YKL139W EFM2P38347 419 aa3.89□□□□□ -1.79
CTK1YKL139W PCA1P38360 1216 aa3.89□□□□□ -1.79
CTK1YKL139W ERG7P38604 731 aa3.89□□□□□ -1.79
CTK1YKL139W NAS2P40555 220 aa3.89□□□□□ -1.79
CTK1YKL139W GPI1P53306 609 aa3.89□□□□□ -1.79
CTK1YKL139W YNL181WP53878 407 aa3.89□□□□□ -1.79
CTK1YKL139W SLD5Q03406 294 aa3.89□□□□□ -1.79
CTK1YKL139W ECI1Q05871 280 aa3.89□□□□□ -1.79
CTK1YKL139W SOR2Q07786 357 aa3.89□□□□□ -1.79
CTK1YKL139W BSC1Q12140 328 aa3.89□□□□□ -1.79
CTK1YKL139W TFB5Q3E7C1 72 aaPredicted RBP3.89□□□□□ -1.79
CTK1YKL139W LEU4P06208 619 aaKnown RBP3.88□□□□□ -1.79
CTK1YKL139W SPC110P32380 944 aa3.88□□□□□ -1.79
CTK1YKL139W MRPL4P36517 319 aa3.88□□□□□ -1.79
CTK1YKL139W RRN10P38204 145 aa3.88□□□□□ -1.79
CTK1YKL139W IAH1P41734 238 aa3.88□□□□□ -1.79
CTK1YKL139W SCD6P45978 349 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79 RIP-Chip
CTK1YKL139W YJR011CP47086 261 aaPredicted RBP3.88□□□□□ -1.79
CTK1YKL139W YIF1P53845 314 aaKnown RBP3.88□□□□□ -1.79
CTK1YKL139W ESBP6P53918 673 aa3.88□□□□□ -1.79
CTK1YKL139W RPN9Q04062 393 aaKnown RBP3.88□□□□□ -1.79
CTK1YKL139W ATX2Q12067 313 aa3.88□□□□□ -1.79
CTK1YKL139W ARP6Q12509 438 aa3.88□□□□□ -1.79
CTK1YKL139W YER190C-BP0CX94 160 aa3.87□□□□□ -1.79
CTK1YKL139W YEL077W-AP0CX95 160 aa3.87□□□□□ -1.79
CTK1YKL139W YGR296C-BP0CX96 160 aa3.87□□□□□ -1.79
CTK1YKL139W YPL283W-BP0CX97 160 aa3.87□□□□□ -1.79
CTK1YKL139W YPR204C-AP0CX98 160 aa3.87□□□□□ -1.79
CTK1YKL139W DAL5P15365 543 aa3.87□□□□□ -1.79
CTK1YKL139W YCR007CP25354 239 aa3.87□□□□□ -1.79
CTK1YKL139W YEL043WP32618 956 aa3.87□□□□□ -1.79
CTK1YKL139W GDT1P38301 280 aaPredicted RBP3.87□□□□□ -1.79
CTK1YKL139W RRP4P38792 359 aaKnown RBP3.87□□□□□ -1.79
CTK1YKL139W FAU1P40099 211 aa3.87□□□□□ -1.79
CTK1YKL139W CHS6P40955 746 aa3.87□□□□□ -1.79
CTK1YKL139W DSL1P53847 754 aa3.87□□□□□ -1.79
CTK1YKL139W SAM50P53969 484 aa3.87□□□□□ -1.79
CTK1YKL139W RPL15BP54780 204 aaPredicted RBP3.87□□□□□ -1.79
CTK1YKL139W MSS11Q03825 758 aa3.87□□□□□ -1.79
CTK1YKL139W YDR387CQ04162 555 aa3.87□□□□□ -1.79
CTK1YKL139W NRT1Q08485 598 aa3.87□□□□□ -1.79
CTK1YKL139W ADE4P04046 510 aaKnown RBP3.86□□□□□ -1.79
CTK1YKL139W RPI1P23250 407 aaKnown RBP3.86□□□□□ -1.79
CTK1YKL139W BUB3P26449 341 aa3.86□□□□□ -1.79
CTK1YKL139W FRE1P32791 686 aa3.86□□□□□ -1.79
CTK1YKL139W SPC34P36131 295 aa3.86□□□□□ -1.79
CTK1YKL139W OSH3P38713 996 aaKnown RBP3.86□□□□□ -1.79
CTK1YKL139W THI20Q08224 551 aa3.86□□□□□ -1.79
CTK1YKL139W UBX3Q12229 455 aa3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms