RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W RPN2P32565 945 aaKnown RBP5.13□□□□□ -1.59
SPC42YKL042W VPS17P32913 551 aa5.13□□□□□ -1.59
SPC42YKL042W HEL1P36113 551 aa5.13□□□□□ -1.59
SPC42YKL042W GND1P38720 489 aaKnown RBP5.13□□□□□ -1.59
SPC42YKL042W SCD6P45978 349 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
SPC42YKL042W ECM27P47144 725 aa5.13□□□□□ -1.59
SPC42YKL042W YGL082WP53155 381 aa5.13□□□□□ -1.59
SPC42YKL042W YDR415CQ04033 374 aaPredicted RBP5.13□□□□□ -1.59
SPC42YKL042W THI20Q08224 551 aa5.13□□□□□ -1.59
SPC42YKL042W SMF3Q12078 473 aaPredicted RBP5.13□□□□□ -1.59
SPC42YKL042W MTR10Q99189 972 aa5.13□□□□□ -1.59
SPC42YKL042W LEU4P06208 619 aaKnown RBP5.12□□□□□ -1.59
SPC42YKL042W RPL1AP0CX43 217 aaKnown RBP5.12□□□□□ -1.59
SPC42YKL042W RPL1BP0CX44 217 aaKnown RBP5.12□□□□□ -1.59
SPC42YKL042W RHB1P25378 209 aa5.12□□□□□ -1.59
SPC42YKL042W PPZ1P26570 692 aa5.12□□□□□ -1.59
SPC42YKL042W SIN4P32259 974 aa5.12□□□□□ -1.59
SPC42YKL042W ACH1P32316 526 aa5.12□□□□□ -1.59
SPC42YKL042W PRP21P32524 280 aaPredicted RBP5.12□□□□□ -1.59
SPC42YKL042W ANP1P32629 500 aa5.12□□□□□ -1.59
SPC42YKL042W ECM15P35195 104 aa5.12□□□□□ -1.59
SPC42YKL042W SWH1P35845 1188 aa5.12□□□□□ -1.59
SPC42YKL042W MIC60P36112 540 aa5.12□□□□□ -1.59
SPC42YKL042W OSH3P38713 996 aaKnown RBP5.12□□□□□ -1.59
SPC42YKL042W CSM2P40465 213 aa5.12□□□□□ -1.59
SPC42YKL042W ATP22P50273 684 aaPredicted RBP5.12□□□□□ -1.59
SPC42YKL042W TDA7P53882 636 aaPredicted RBP5.12□□□□□ -1.59
SPC42YKL042W EOS1P53938 366 aa5.12□□□□□ -1.59
SPC42YKL042W OCA2P53949 197 aa5.12□□□□□ -1.59
SPC42YKL042W NRT1Q08485 598 aa5.12□□□□□ -1.59
SPC42YKL042W KEL3Q08979 651 aaPredicted RBP5.12□□□□□ -1.59
SPC42YKL042W FRE6Q12473 712 aa5.12□□□□□ -1.59
SPC42YKL042W TY1B-AO13527 1196 aaKnown RBP5.11□□□□□ -1.59
SPC42YKL042W SEC62P21825 274 aa5.11□□□□□ -1.59
SPC42YKL042W YNK1P36010 153 aaKnown RBP5.11□□□□□ -1.59
SPC42YKL042W RRP3P38712 501 aaKnown RBP5.11□□□□□ -1.59
SPC42YKL042W CCT2P39076 527 aaKnown RBP5.11□□□□□ -1.59
SPC42YKL042W FAU1P40099 211 aa5.11□□□□□ -1.59
SPC42YKL042W PCI8P40512 444 aa5.11□□□□□ -1.59
SPC42YKL042W TOM22P49334 152 aa5.11□□□□□ -1.59
SPC42YKL042W DSL1P53847 754 aa5.11□□□□□ -1.59
SPC42YKL042W HSP31Q04432 237 aa5.11□□□□□ -1.59
SPC42YKL042W YDR286CQ05530 114 aa5.11□□□□□ -1.59
SPC42YKL042W RKM1Q08961 583 aaPredicted RBP5.11□□□□□ -1.59
SPC42YKL042W UBX3Q12229 455 aa5.11□□□□□ -1.59
SPC42YKL042W LSP1Q12230 341 aaKnown RBP5.11□□□□□ -1.59
SPC42YKL042W RKM5Q12367 367 aa5.11□□□□□ -1.59
SPC42YKL042W YPT1P01123 206 aaKnown RBP5.1□□□□□ -1.59
SPC42YKL042W SEC63P14906 663 aa5.1□□□□□ -1.59
SPC42YKL042W TPM1P17536 199 aaKnown RBP5.1□□□□□ -1.59
SPC42YKL042W GEX1P25596 615 aa5.1□□□□□ -1.59
SPC42YKL042W FRE1P32791 686 aa5.1□□□□□ -1.59
SPC42YKL042W ZTA1P38230 334 aaKnown RBP5.1□□□□□ -1.59
SPC42YKL042W FAD1P38913 306 aa5.1□□□□□ -1.59
SPC42YKL042W YER130CP39959 443 aa5.1□□□□□ -1.59
SPC42YKL042W VHS2P40463 436 aa5.1□□□□□ -1.59
SPC42YKL042W BTN2P53286 410 aa5.1□□□□□ -1.59
SPC42YKL042W YPL107WQ02873 248 aa5.1□□□□□ -1.59
SPC42YKL042W YMR254CQ04838 102 aa5.1□□□□□ -1.59
SPC42YKL042W MDM30Q05930 598 aa5.1□□□□□ -1.59
SPC42YKL042W DSE3Q08729 430 aa5.1□□□□□ -1.59
SPC42YKL042W EXO70P19658 623 aa5.09□□□□□ -1.59
SPC42YKL042W ERG1P32476 496 aaKnown RBP5.09□□□□□ -1.59
SPC42YKL042W EFM2P38347 419 aa5.09□□□□□ -1.59
SPC42YKL042W RFC3P38629 340 aa5.09□□□□□ -1.59
SPC42YKL042W SPC97P38863 823 aa5.09□□□□□ -1.59
SPC42YKL042W YTA12P40341 825 aa5.09□□□□□ -1.59
SPC42YKL042W AZF1P41696 914 aa5.09□□□□□ -1.59
SPC42YKL042W GUF1P46943 645 aa5.09□□□□□ -1.59
SPC42YKL042W RHO5P53879 331 aaKnown RBP5.09□□□□□ -1.59
SPC42YKL042W SEC5P89102 971 aa5.09□□□□□ -1.59
SPC42YKL042W MLH2Q07980 695 aa5.09□□□□□ -1.59
SPC42YKL042W NFI1Q12216 726 aa5.09□□□□□ -1.59
SPC42YKL042W SKS1Q12505 502 aa5.09□□□□□ -1.59
SPC42YKL042W CAR1P00812 333 aaKnown RBP5.08□□□□□ -1.6
SPC42YKL042W SCEIP03882 235 aa5.08□□□□□ -1.6
SPC42YKL042W YML002WP0CF17 737 aa5.08□□□□□ -1.6
SPC42YKL042W HNM1P19807 563 aa5.08□□□□□ -1.6
SPC42YKL042W BUB3P26449 341 aa5.08□□□□□ -1.6
SPC42YKL042W SAS2P40963 338 aa5.08□□□□□ -1.6
SPC42YKL042W YJR011CP47086 261 aaPredicted RBP5.08□□□□□ -1.6
SPC42YKL042W YMR087WQ04299 284 aa5.08□□□□□ -1.6
SPC42YKL042W RBA50Q04418 439 aa5.08□□□□□ -1.6
SPC42YKL042W BNA5Q05979 453 aa5.08□□□□□ -1.6
SPC42YKL042W YLR456WQ06199 204 aa5.08□□□□□ -1.6
SPC42YKL042W YEH2Q07950 538 aa5.08□□□□□ -1.6
SPC42YKL042W CUE5Q08412 411 aaKnown RBP5.08□□□□□ -1.6
SPC42YKL042W PGC1Q08959 321 aa5.08□□□□□ -1.6
SPC42YKL042W RPI1P23250 407 aaKnown RBP5.07□□□□□ -1.6
SPC42YKL042W MSP1P28737 362 aa5.07□□□□□ -1.6
SPC42YKL042W RAD24P32641 659 aa5.07□□□□□ -1.6
SPC42YKL042W SOR1P35497 357 aaKnown RBP5.07□□□□□ -1.6
SPC42YKL042W ASK1P35734 292 aa5.07□□□□□ -1.6
SPC42YKL042W VPS52P39904 641 aa5.07□□□□□ -1.6
SPC42YKL042W YIF1P53845 314 aaKnown RBP5.07□□□□□ -1.6
SPC42YKL042W YDR387CQ04162 555 aa5.07□□□□□ -1.6
SPC42YKL042W SOR2Q07786 357 aa5.07□□□□□ -1.6
SPC42YKL042W PDE2P06776 526 aa5.06□□□□□ -1.6
SPC42YKL042W YFL068WP0CX99 160 aa5.06□□□□□ -1.6
SPC42YKL042W YLL066W-AP0CY00 160 aa5.06□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms