RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C SLD3P53135 668 aa2.09□□□□□ -2.07
UFD4YKL010C YGR127WP53275 312 aa2.09□□□□□ -2.07
UFD4YKL010C ABZ2Q03266 374 aa2.09□□□□□ -2.07
UFD4YKL010C EFR3Q03653 782 aaKnown RBP2.09□□□□□ -2.07
UFD4YKL010C YPS7Q06325 596 aa2.09□□□□□ -2.07
UFD4YKL010C YPR196WQ06595 470 aa2.09□□□□□ -2.07
UFD4YKL010C MCM21Q06675 368 aa2.09□□□□□ -2.07
UFD4YKL010C THP1Q08231 455 aa2.09□□□□□ -2.07
UFD4YKL010C YOL131WQ08270 108 aa2.09□□□□□ -2.07
UFD4YKL010C NDD1Q08887 554 aa2.09□□□□□ -2.07
UFD4YKL010C DDC1Q08949 612 aa2.09□□□□□ -2.07
UFD4YKL010C THP3Q12049 470 aaKnown RBP2.09□□□□□ -2.07
UFD4YKL010C LDB17Q12342 491 aa2.09□□□□□ -2.07
UFD4YKL010C LPX1Q12405 387 aaKnown RBP2.09□□□□□ -2.07
UFD4YKL010C MSS116P15424 664 aaKnown RBP2.09□□□□□ -2.08
UFD4YKL010C MDH1P17505 334 aaKnown RBP RIP-Chip data2.09□□□□□ -2.08not detected
UFD4YKL010C FPR1P20081 114 aaKnown RBP2.09□□□□□ -2.08
UFD4YKL010C PPH22P23595 377 aa2.09□□□□□ -2.08
UFD4YKL010C CLB2P24869 491 aa2.09□□□□□ -2.08
UFD4YKL010C RVS161P25343 265 aaKnown RBP2.09□□□□□ -2.08
UFD4YKL010C TAH1P25638 111 aaPredicted RBP2.09□□□□□ -2.08
UFD4YKL010C RAD27P26793 382 aa2.09□□□□□ -2.08
UFD4YKL010C ACH1P32316 526 aa2.09□□□□□ -2.08
UFD4YKL010C SPT14P32363 452 aa2.09□□□□□ -2.08
UFD4YKL010C PTC1P35182 281 aa2.09□□□□□ -2.08
UFD4YKL010C ARA1P38115 344 aa2.09□□□□□ -2.08
UFD4YKL010C IML3P38265 245 aa2.09□□□□□ -2.08
UFD4YKL010C RCK1P38622 512 aa2.09□□□□□ -2.08
UFD4YKL010C TIM17P39515 158 aa2.09□□□□□ -2.08
UFD4YKL010C GIP4P39732 760 aa2.09□□□□□ -2.08
UFD4YKL010C THO1P40040 218 aaKnown RBP2.09□□□□□ -2.08
UFD4YKL010C MGS1P40151 587 aa2.09□□□□□ -2.08
UFD4YKL010C SNM1P40993 198 aa2.09□□□□□ -2.08
UFD4YKL010C GUS1P46655 708 aaKnown RBP RIP-Chip data2.09□□□□□ -2.08not detected
UFD4YKL010C SIP4P46954 829 aa2.09□□□□□ -2.08
UFD4YKL010C YGR168CP53293 376 aa2.09□□□□□ -2.08
UFD4YKL010C COP1P53622 1201 aaKnown RBP2.09□□□□□ -2.08
UFD4YKL010C YNR040WP53736 256 aa2.09□□□□□ -2.08
UFD4YKL010C TGL2P54857 326 aa2.09□□□□□ -2.08
UFD4YKL010C RSC4Q02206 625 aa2.09□□□□□ -2.08
UFD4YKL010C RSN1Q03516 953 aa2.09□□□□□ -2.08
UFD4YKL010C YCS4Q06156 1176 aa2.09□□□□□ -2.08
UFD4YKL010C EAF1Q06337 982 aa2.09□□□□□ -2.08
UFD4YKL010C NGL1Q08213 363 aaKnown RBP2.09□□□□□ -2.08
UFD4YKL010C NMD4Q12129 218 aa2.09□□□□□ -2.08
UFD4YKL010C AFI1Q99222 893 aa2.09□□□□□ -2.08
UFD4YKL010C TY2A-LR1P0C2J4 438 aa2.09□□□□□ -2.08
UFD4YKL010C TY2A-FP0CX61 438 aa2.09□□□□□ -2.08
UFD4YKL010C TY2A-GR2P0CX62 438 aa2.09□□□□□ -2.08
UFD4YKL010C RRP7P25368 297 aaPredicted RBP2.09□□□□□ -2.08
UFD4YKL010C TY2A-CP25383 438 aa2.09□□□□□ -2.08
UFD4YKL010C CRM1P30822 1084 aaKnown RBP2.09□□□□□ -2.08
UFD4YKL010C DRE2P36152 348 aa2.09□□□□□ -2.08
UFD4YKL010C ALG14P38242 237 aa2.09□□□□□ -2.08
UFD4YKL010C YBP1P38315 674 aa2.09□□□□□ -2.08
UFD4YKL010C YEL068CP39977 110 aa2.09□□□□□ -2.08
UFD4YKL010C YNL018CP53976 612 aa2.09□□□□□ -2.08
UFD4YKL010C PIR1Q03178 341 aa2.09□□□□□ -2.08
UFD4YKL010C TY2A-DR2Q03483 438 aa2.09□□□□□ -2.08
UFD4YKL010C URC2Q04411 772 aa2.09□□□□□ -2.08
UFD4YKL010C EMG1Q06287 252 aaKnown RBP2.09□□□□□ -2.08
UFD4YKL010C PUS7Q08647 676 aaKnown RBP2.09□□□□□ -2.08
UFD4YKL010C RUP1Q12242 671 aa2.09□□□□□ -2.08
UFD4YKL010C TY2A-BQ12260 438 aa2.09□□□□□ -2.08
UFD4YKL010C TY2A-OR2Q12293 438 aa2.09□□□□□ -2.08
UFD4YKL010C TY2A-DR1Q12392 438 aa2.09□□□□□ -2.08
UFD4YKL010C TY2A-OR1Q12439 438 aa2.09□□□□□ -2.08
UFD4YKL010C YDR524C-BQ3E6R4 66 aa2.09□□□□□ -2.08
UFD4YKL010C TY2A-DR3Q99303 438 aa2.09□□□□□ -2.08
UFD4YKL010C MAS1P10507 462 aa2.08□□□□□ -2.08
UFD4YKL010C IDI1P15496 288 aa2.08□□□□□ -2.08
UFD4YKL010C CCA1P21269 546 aa2.08□□□□□ -2.08
UFD4YKL010C MIH1P23748 554 aa2.08□□□□□ -2.08
UFD4YKL010C MNE1P24720 663 aa2.08□□□□□ -2.08
UFD4YKL010C HSP30P25619 332 aa2.08□□□□□ -2.08
UFD4YKL010C PTC6P25646 442 aa2.08□□□□□ -2.08
UFD4YKL010C RFA2P26754 273 aaKnown RBP2.08□□□□□ -2.08
UFD4YKL010C NGG1P32494 702 aa2.08□□□□□ -2.08
UFD4YKL010C PRP21P32524 280 aaPredicted RBP2.08□□□□□ -2.08
UFD4YKL010C EGD2P38879 174 aaKnown RBP2.08□□□□□ -2.08
UFD4YKL010C AST2P39945 430 aaKnown RBP2.08□□□□□ -2.08
UFD4YKL010C MMF1P40185 145 aaKnown RBP2.08□□□□□ -2.08
UFD4YKL010C ALR2P43553 858 aa2.08□□□□□ -2.08
UFD4YKL010C YFR020WP43600 232 aa2.08□□□□□ -2.08
UFD4YKL010C YGL176CP46945 554 aa2.08□□□□□ -2.08
UFD4YKL010C AIM22P47051 409 aa2.08□□□□□ -2.08
UFD4YKL010C IMD4P50094 524 aaKnown RBP2.08□□□□□ -2.08
UFD4YKL010C FLC3P53121 802 aa2.08□□□□□ -2.08
UFD4YKL010C YGR015CP53208 328 aa2.08□□□□□ -2.08
UFD4YKL010C HER2Q03557 464 aa2.08□□□□□ -2.08
UFD4YKL010C TRM82Q03774 444 aa2.08□□□□□ -2.08
UFD4YKL010C RSF1Q05043 376 aa2.08□□□□□ -2.08
UFD4YKL010C VPS74Q06385 345 aa2.08□□□□□ -2.08
UFD4YKL010C YLR049CQ12110 428 aa2.08□□□□□ -2.08
UFD4YKL010C MED2Q12124 431 aa2.08□□□□□ -2.08
UFD4YKL010C UPC2Q12151 913 aa2.08□□□□□ -2.08
UFD4YKL010C IES3Q12345 250 aa2.08□□□□□ -2.08
UFD4YKL010C ARP7Q12406 477 aa2.08□□□□□ -2.08
UFD4YKL010C TAO3P40468 2376 aa2.08□□□□□ -2.08
UFD4YKL010C HIS1P00498 297 aaKnown RBP2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms