RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W SAP4P53036 818 aa6.19□□□□□ -1.42
GEF1YJR040W SLD3P53135 668 aa6.19□□□□□ -1.42
GEF1YJR040W PDR8Q06149 701 aa6.19□□□□□ -1.42
GEF1YJR040W EMG1Q06287 252 aaKnown RBP6.19□□□□□ -1.42
GEF1YJR040W YLL007CQ07799 665 aa6.19□□□□□ -1.42
GEF1YJR040W YNG1Q08465 219 aa6.19□□□□□ -1.42
GEF1YJR040W RTC5Q12108 567 aaKnown RBP6.19□□□□□ -1.42
GEF1YJR040W ARG3P05150 338 aa6.18□□□□□ -1.42
GEF1YJR040W YGL041W-AP0C5N3 154 aa6.18□□□□□ -1.42
GEF1YJR040W DIT1P21623 536 aa6.18□□□□□ -1.42
GEF1YJR040W TOM20P35180 183 aa6.18□□□□□ -1.42
GEF1YJR040W TEF4P36008 412 aaKnown RBP6.18□□□□□ -1.42
GEF1YJR040W SPC34P36131 295 aa6.18□□□□□ -1.42
GEF1YJR040W YHK8P38776 514 aa6.18□□□□□ -1.42
GEF1YJR040W YEL020CP39994 560 aa6.18□□□□□ -1.42
GEF1YJR040W PHM8P40025 321 aa6.18□□□□□ -1.42
GEF1YJR040W SEC28P40509 296 aaKnown RBP6.18□□□□□ -1.42
GEF1YJR040W YKE4P40544 346 aa6.18□□□□□ -1.42
GEF1YJR040W NAS6P50086 228 aa6.18□□□□□ -1.42
GEF1YJR040W YNL095CP53932 642 aa6.18□□□□□ -1.42
GEF1YJR040W TRS31Q03337 283 aa6.18□□□□□ -1.42
GEF1YJR040W RPN9Q04062 393 aaKnown RBP6.18□□□□□ -1.42
GEF1YJR040W ARP10Q04549 284 aa6.18□□□□□ -1.42
GEF1YJR040W RSC3Q06639 885 aa6.18□□□□□ -1.42
GEF1YJR040W SWC7Q06707 132 aa6.18□□□□□ -1.42
GEF1YJR040W CLP1Q08685 445 aaPredicted RBP6.18□□□□□ -1.42
GEF1YJR040W TRE2Q08693 809 aa6.18□□□□□ -1.42
GEF1YJR040W FEX1Q08913 375 aa6.18□□□□□ -1.42
GEF1YJR040W THP2O13539 261 aaKnown RBP6.17□□□□□ -1.42
GEF1YJR040W RPA135P22138 1203 aaKnown RBP6.17□□□□□ -1.42
GEF1YJR040W PPH22P23595 377 aa6.17□□□□□ -1.42
GEF1YJR040W BUB2P26448 306 aaPredicted RBP6.17□□□□□ -1.42
GEF1YJR040W KTR4P38131 464 aa6.17□□□□□ -1.42
GEF1YJR040W APM3P38153 483 aa6.17□□□□□ -1.42
GEF1YJR040W IPI1P38803 334 aaPredicted RBP6.17□□□□□ -1.42
GEF1YJR040W COA1P40452 197 aa6.17□□□□□ -1.42
GEF1YJR040W RIM21P48565 533 aa6.17□□□□□ -1.42
GEF1YJR040W IMA1P53051 589 aa6.17□□□□□ -1.42
GEF1YJR040W TPN1P53099 579 aa6.17□□□□□ -1.42
GEF1YJR040W BSC5P53755 489 aa6.17□□□□□ -1.42
GEF1YJR040W TRM12Q04235 462 aa6.17□□□□□ -1.42
GEF1YJR040W SEG1Q04279 960 aa6.17□□□□□ -1.42
GEF1YJR040W PEX12Q04370 399 aa6.17□□□□□ -1.42
GEF1YJR040W YPS7Q06325 596 aa6.17□□□□□ -1.42
GEF1YJR040W YOR214CQ12282 236 aa6.17□□□□□ -1.42
GEF1YJR040W AFI1Q99222 893 aa6.17□□□□□ -1.42
GEF1YJR040W SAS5Q99314 248 aa6.17□□□□□ -1.42
GEF1YJR040W VPS13Q07878 3144 aa6.17□□□□□ -1.42
GEF1YJR040W TIM9O74700 87 aa6.17□□□□□ -1.42
GEF1YJR040W ARG81P05085 880 aa6.17□□□□□ -1.42
GEF1YJR040W STE3P06783 470 aa6.17□□□□□ -1.42
GEF1YJR040W TRX2P22803 104 aaKnown RBP6.17□□□□□ -1.42
GEF1YJR040W RPL24BP24000 155 aaKnown RBP6.17□□□□□ -1.42
GEF1YJR040W ERG6P25087 383 aaKnown RBP6.17□□□□□ -1.42
GEF1YJR040W CHA1P25379 360 aaKnown RBP6.17□□□□□ -1.42
GEF1YJR040W NTG1P31378 399 aa6.17□□□□□ -1.42
GEF1YJR040W PTM1P32857 523 aa6.17□□□□□ -1.42
GEF1YJR040W TOD6P34219 525 aa6.17□□□□□ -1.42
GEF1YJR040W ANR2P36090 516 aaPredicted RBP6.17□□□□□ -1.42
GEF1YJR040W GPX2P38143 162 aa6.17□□□□□ -1.42
GEF1YJR040W URA8P38627 578 aaPredicted RBP6.17□□□□□ -1.42
GEF1YJR040W THO1P40040 218 aaKnown RBP6.17□□□□□ -1.42
GEF1YJR040W ELO3P40319 345 aa6.17□□□□□ -1.42
GEF1YJR040W YFR018CP43599 363 aa6.17□□□□□ -1.42
GEF1YJR040W COG1P53079 417 aa6.17□□□□□ -1.42
GEF1YJR040W CGR1P53188 120 aa6.17□□□□□ -1.42
GEF1YJR040W COQ6P53318 479 aa6.17□□□□□ -1.42
GEF1YJR040W SIW14P53965 281 aa6.17□□□□□ -1.42
GEF1YJR040W SSY1Q03770 852 aa6.17□□□□□ -1.42
GEF1YJR040W RIF2Q06208 395 aa6.17□□□□□ -1.42
GEF1YJR040W LDB18Q07887 179 aa6.17□□□□□ -1.42
GEF1YJR040W YDR061WQ12298 539 aa6.17□□□□□ -1.42
GEF1YJR040W YPR1Q12458 312 aa6.17□□□□□ -1.42
GEF1YJR040W COX5AP00424 153 aa6.16□□□□□ -1.42
GEF1YJR040W DSF1P0CX08 502 aa6.16□□□□□ -1.42
GEF1YJR040W YNR073CP0CX09 502 aa6.16□□□□□ -1.42
GEF1YJR040W ENA1P13587 1091 aa6.16□□□□□ -1.42
GEF1YJR040W CMP2P14747 604 aa6.16□□□□□ -1.42
GEF1YJR040W ACO1P19414 778 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
GEF1YJR040W SGV1P23293 657 aaKnown RBP6.16□□□□□ -1.42
GEF1YJR040W AAT2P23542 418 aaKnown RBP6.16□□□□□ -1.42
GEF1YJR040W MIH1P23748 554 aa6.16□□□□□ -1.42
GEF1YJR040W GIT1P25346 518 aa6.16□□□□□ -1.42
GEF1YJR040W ATG22P25568 528 aa6.16□□□□□ -1.42
GEF1YJR040W FUN30P31380 1131 aa6.16□□□□□ -1.42
GEF1YJR040W MET22P32179 357 aa6.16□□□□□ -1.42
GEF1YJR040W RGA1P39083 1007 aa6.16□□□□□ -1.42
GEF1YJR040W DSS1P39112 969 aa6.16□□□□□ -1.42
GEF1YJR040W EXO1P39875 702 aa6.16□□□□□ -1.42
GEF1YJR040W TIR3P40552 269 aa6.16□□□□□ -1.42
GEF1YJR040W IRC18P47056 224 aa6.16□□□□□ -1.42
GEF1YJR040W RPS12P48589 143 aaKnown RBP6.16□□□□□ -1.42
GEF1YJR040W STR3P53101 465 aaKnown RBP6.16□□□□□ -1.42
GEF1YJR040W GTR2P53290 341 aa6.16□□□□□ -1.42
GEF1YJR040W GND2P53319 492 aa6.16□□□□□ -1.42
GEF1YJR040W RPL34AP87262 121 aaPredicted RBP6.16□□□□□ -1.42
GEF1YJR040W CDC14Q00684 551 aa6.16□□□□□ -1.42
GEF1YJR040W ENA2Q01896 1091 aa6.16□□□□□ -1.42
GEF1YJR040W RPL6AQ02326 176 aaKnown RBP6.16□□□□□ -1.42
GEF1YJR040W YMR010WQ03687 405 aa6.16□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms