RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W CAK1P43568 368 aaPredicted RBP2.17□□□□□ -2.06
MSL1YIR009W YPI1P43587 155 aa2.17□□□□□ -2.06
MSL1YIR009W SMC3P47037 1230 aa2.17□□□□□ -2.06
MSL1YIR009W YGL138CP53122 345 aa2.17□□□□□ -2.06
MSL1YIR009W YGR111WP53265 400 aa2.17□□□□□ -2.06
MSL1YIR009W SOL4P53315 255 aa2.17□□□□□ -2.06
MSL1YIR009W TDA7P53882 636 aaPredicted RBP2.17□□□□□ -2.06
MSL1YIR009W VPS9P54787 451 aa2.17□□□□□ -2.06
MSL1YIR009W YPL107WQ02873 248 aa2.17□□□□□ -2.06
MSL1YIR009W PRP42Q03776 544 aaKnown RBP2.17□□□□□ -2.06
MSL1YIR009W FIN1Q03898 291 aa2.17□□□□□ -2.06
MSL1YIR009W VTA1Q06263 330 aa2.17□□□□□ -2.06
MSL1YIR009W ATG26Q06321 1198 aa2.17□□□□□ -2.06
MSL1YIR009W YEH2Q07950 538 aa2.17□□□□□ -2.06
MSL1YIR009W CDC45Q08032 650 aa2.17□□□□□ -2.06
MSL1YIR009W RPS10AQ08745 105 aaPredicted RBP2.17□□□□□ -2.06
MSL1YIR009W PGC1Q08959 321 aa2.17□□□□□ -2.06
MSL1YIR009W RPN5Q12250 445 aaKnown RBP2.17□□□□□ -2.06
MSL1YIR009W SEC39Q12745 709 aa2.17□□□□□ -2.06
MSL1YIR009W YDL007C-AQ2V2Q0 85 aa2.17□□□□□ -2.06
MSL1YIR009W SSK2P53599 1579 aa2.16□□□□□ -2.06
MSL1YIR009W COR1P07256 457 aa2.16□□□□□ -2.06
MSL1YIR009W RPL31BP0C2H9 113 aaKnown RBP2.16□□□□□ -2.06
MSL1YIR009W URA4P20051 364 aa2.16□□□□□ -2.06
MSL1YIR009W PRD1P25375 712 aa2.16□□□□□ -2.06
MSL1YIR009W YIM1P28625 365 aa2.16□□□□□ -2.06
MSL1YIR009W MCM4P30665 933 aaKnown RBP2.16□□□□□ -2.06
MSL1YIR009W ATS1P31386 333 aa2.16□□□□□ -2.06
MSL1YIR009W ACH1P32316 526 aa2.16□□□□□ -2.06
MSL1YIR009W AGA1P32323 725 aa2.16□□□□□ -2.06
MSL1YIR009W SMI1P32566 505 aa2.16□□□□□ -2.06
MSL1YIR009W RML2P32611 393 aa2.16□□□□□ -2.06
MSL1YIR009W YKL100CP34248 587 aa2.16□□□□□ -2.06
MSL1YIR009W LAS1P36146 502 aaPredicted RBP2.16□□□□□ -2.06
MSL1YIR009W MRPL4P36517 319 aa2.16□□□□□ -2.06
MSL1YIR009W ROT2P38138 954 aa2.16□□□□□ -2.06
MSL1YIR009W NTC20P38302 140 aaPredicted RBP2.16□□□□□ -2.06
MSL1YIR009W RRP3P38712 501 aaKnown RBP2.16□□□□□ -2.06
MSL1YIR009W YJL213WP40896 331 aa2.16□□□□□ -2.06
MSL1YIR009W BUD27P43573 796 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
MSL1YIR009W IKS1P47042 667 aa2.16□□□□□ -2.06
MSL1YIR009W YGR149WP48236 432 aa2.16□□□□□ -2.06
MSL1YIR009W COS10P52924 374 aa2.16□□□□□ -2.06
MSL1YIR009W ERG26P53199 349 aaKnown RBP2.16□□□□□ -2.06
MSL1YIR009W YGR126WP53274 230 aa2.16□□□□□ -2.06
MSL1YIR009W TOF2Q02208 771 aa2.16□□□□□ -2.06
MSL1YIR009W ADD37Q03233 198 aa2.16□□□□□ -2.06
MSL1YIR009W MSS11Q03825 758 aa2.16□□□□□ -2.06
MSL1YIR009W RBA50Q04418 439 aa2.16□□□□□ -2.06
MSL1YIR009W SOV1Q04748 898 aa2.16□□□□□ -2.06
MSL1YIR009W DON1Q05610 365 aa2.16□□□□□ -2.06
MSL1YIR009W MMR1Q06324 491 aa2.16□□□□□ -2.06
MSL1YIR009W RTT109Q07794 436 aa2.16□□□□□ -2.06
MSL1YIR009W KEL3Q08979 651 aaPredicted RBP2.16□□□□□ -2.06
MSL1YIR009W ARP6Q12509 438 aa2.16□□□□□ -2.06
MSL1YIR009W SIN3P22579 1536 aa2.16□□□□□ -2.06
MSL1YIR009W RAV1P47104 1357 aa2.15□□□□□ -2.07
MSL1YIR009W HIP1P06775 603 aa2.15□□□□□ -2.07
MSL1YIR009W LPD1P09624 499 aaKnown RBP2.15□□□□□ -2.07
MSL1YIR009W SNF3P10870 884 aa2.15□□□□□ -2.07
MSL1YIR009W ELO2P25358 347 aa2.15□□□□□ -2.07
MSL1YIR009W SPB1P25582 841 aaPredicted RBP2.15□□□□□ -2.07
MSL1YIR009W LDB16P25587 256 aa2.15□□□□□ -2.07
MSL1YIR009W ARA1P38115 344 aa2.15□□□□□ -2.07
MSL1YIR009W SLM4P38247 162 aa2.15□□□□□ -2.07
MSL1YIR009W UBA4P38820 440 aa2.15□□□□□ -2.07
MSL1YIR009W CIN4P39110 191 aa2.15□□□□□ -2.07
MSL1YIR009W RPH1P39956 796 aa2.15□□□□□ -2.07
MSL1YIR009W RPS10BP46784 105 aaKnown RBP2.15□□□□□ -2.07
MSL1YIR009W SNG1P46950 547 aa2.15□□□□□ -2.07
MSL1YIR009W APT1P49435 187 aaKnown RBP2.15□□□□□ -2.07
MSL1YIR009W RHO5P53879 331 aaKnown RBP2.15□□□□□ -2.07
MSL1YIR009W EOS1P53938 366 aa2.15□□□□□ -2.07
MSL1YIR009W MSC1Q03104 513 aa2.15□□□□□ -2.07
MSL1YIR009W YMR160WQ03823 816 aa2.15□□□□□ -2.07
MSL1YIR009W ERP1Q05359 219 aaKnown RBP2.15□□□□□ -2.07
MSL1YIR009W RRP45Q05636 305 aaKnown RBP2.15□□□□□ -2.07
MSL1YIR009W THP1Q08231 455 aa2.15□□□□□ -2.07
MSL1YIR009W RDR1Q08904 546 aa2.15□□□□□ -2.07
MSL1YIR009W PDE2P06776 526 aa2.14□□□□□ -2.07
MSL1YIR009W TPM1P17536 199 aaKnown RBP2.14□□□□□ -2.07
MSL1YIR009W CLC1P17891 233 aa2.14□□□□□ -2.07
MSL1YIR009W TYR1P20049 452 aa2.14□□□□□ -2.07
MSL1YIR009W SUI2P20459 304 aaKnown RBP2.14□□□□□ -2.07
MSL1YIR009W MCK1P21965 375 aaKnown RBP2.14□□□□□ -2.07
MSL1YIR009W BUD5P25300 642 aaPredicted RBP2.14□□□□□ -2.07
MSL1YIR009W KRR1P25586 316 aaPredicted RBP2.14□□□□□ -2.07
MSL1YIR009W RAD14P28519 371 aa2.14□□□□□ -2.07
MSL1YIR009W MSP1P28737 362 aa2.14□□□□□ -2.07
MSL1YIR009W RPS0AP32905 252 aaKnown RBP2.14□□□□□ -2.07
MSL1YIR009W SEC66P33754 206 aa2.14□□□□□ -2.07
MSL1YIR009W MMS4P38257 691 aa2.14□□□□□ -2.07
MSL1YIR009W PCA1P38360 1216 aa2.14□□□□□ -2.07
MSL1YIR009W WSS1P38838 269 aa2.14□□□□□ -2.07
MSL1YIR009W FAD1P38913 306 aa2.14□□□□□ -2.07
MSL1YIR009W SER3P40054 469 aa2.14□□□□□ -2.07
MSL1YIR009W RPR2P40571 144 aa2.14□□□□□ -2.07
MSL1YIR009W YFR016CP43597 1233 aaKnown RBP2.14□□□□□ -2.07
MSL1YIR009W YJL132WP47014 750 aa2.14□□□□□ -2.07
MSL1YIR009W RTT101P47050 842 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 124.9 ms