RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	SNG1	P46950	547 aa		4.24	□□□□□ -1.73
VMA22	YHR060W	YIP5	P53108	310 aa		4.24	□□□□□ -1.73
VMA22	YHR060W	MPS2	P53159	387 aa		4.24	□□□□□ -1.73
VMA22	YHR060W	YVH1	Q02256	364 aa	Known RBP	4.24	□□□□□ -1.73
VMA22	YHR060W	UTP6	Q02354	440 aa	Known RBP	4.24	□□□□□ -1.73
VMA22	YHR060W	YLR297W	Q05899	129 aa		4.24	□□□□□ -1.73
VMA22	YHR060W	IPK1	Q06667	281 aa		4.24	□□□□□ -1.73
VMA22	YHR060W	POS5	Q06892	414 aa		4.24	□□□□□ -1.73
VMA22	YHR060W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
VMA22	YHR060W	RTC1	Q08281	1341 aa		4.23	□□□□□ -1.73
VMA22	YHR060W	SCEI	P03882	235 aa		4.23	□□□□□ -1.73
VMA22	YHR060W	RNR2	P09938	399 aa	Known RBP	4.23	□□□□□ -1.73
VMA22	YHR060W	HEM1	P09950	548 aa	Predicted RBP	4.23	□□□□□ -1.73
VMA22	YHR060W	SCH9	P11792	824 aa	Known RBP	4.23	□□□□□ -1.73
VMA22	YHR060W	ALG1	P16661	449 aa		4.23	□□□□□ -1.73
VMA22	YHR060W	PMA2	P19657	947 aa		4.23	□□□□□ -1.73
VMA22	YHR060W	CLB2	P24869	491 aa		4.23	□□□□□ -1.73
VMA22	YHR060W	SIN4	P32259	974 aa		4.23	□□□□□ -1.73
VMA22	YHR060W	RPC34	P32910	317 aa		4.23	□□□□□ -1.73
VMA22	YHR060W	RRN10	P38204	145 aa		4.23	□□□□□ -1.73
VMA22	YHR060W	MSG5	P38590	489 aa		4.23	□□□□□ -1.73
VMA22	YHR060W	PEX18	P38855	283 aa		4.23	□□□□□ -1.73
VMA22	YHR060W	PCF11	P39081	626 aa	Predicted RBP	4.23	□□□□□ -1.73
VMA22	YHR060W	TFG2	P41896	400 aa	Predicted RBP	4.23	□□□□□ -1.73
VMA22	YHR060W	YHC3	P47040	408 aa		4.23	□□□□□ -1.73
VMA22	YHR060W	LIA1	P47120	325 aa	Known RBP	4.23	□□□□□ -1.73
VMA22	YHR060W	BRO1	P48582	844 aa		4.23	□□□□□ -1.73
VMA22	YHR060W	MUK1	Q02866	612 aa		4.23	□□□□□ -1.73
VMA22	YHR060W	TMN2	Q04562	672 aa		4.23	□□□□□ -1.73
VMA22	YHR060W	ATG26	Q06321	1198 aa		4.23	□□□□□ -1.73
VMA22	YHR060W	RAD34	Q06665	692 aa		4.23	□□□□□ -1.73
VMA22	YHR060W	NSE1	Q07913	336 aa		4.23	□□□□□ -1.73
VMA22	YHR060W	YOL159C	Q08300	171 aa		4.23	□□□□□ -1.73
VMA22	YHR060W	CHO1	P08456	276 aa		4.22	□□□□□ -1.73
VMA22	YHR060W	ATP10	P18496	279 aa		4.22	□□□□□ -1.73
VMA22	YHR060W	CDC43	P18898	376 aa		4.22	□□□□□ -1.73
VMA22	YHR060W	NTG1	P31378	399 aa		4.22	□□□□□ -1.73
VMA22	YHR060W	LIN1	P38852	340 aa	Predicted RBP	4.22	□□□□□ -1.73
VMA22	YHR060W	SPC97	P38863	823 aa		4.22	□□□□□ -1.73
VMA22	YHR060W	SDS3	P40505	327 aa		4.22	□□□□□ -1.73
VMA22	YHR060W	PAC11	P40960	533 aa		4.22	□□□□□ -1.73
VMA22	YHR060W	POP1	P41812	875 aa		4.22	□□□□□ -1.73
VMA22	YHR060W	AGX1	P43567	385 aa		4.22	□□□□□ -1.73
VMA22	YHR060W	ORC5	P50874	479 aa		4.22	□□□□□ -1.73
VMA22	YHR060W	ZPR1	P53303	486 aa	Known RBP	4.22	□□□□□ -1.73
VMA22	YHR060W	YPR003C	P53394	754 aa		4.22	□□□□□ -1.73
VMA22	YHR060W	SHR3	Q02774	210 aa		4.22	□□□□□ -1.73
VMA22	YHR060W	SMA2	Q04658	369 aa		4.22	□□□□□ -1.73
VMA22	YHR060W	KAP95	Q06142	861 aa	Known RBP	4.22	□□□□□ -1.73
VMA22	YHR060W	RPS10A	Q08745	105 aa	Predicted RBP	4.22	□□□□□ -1.73
VMA22	YHR060W	NDJ1	Q12366	352 aa		4.22	□□□□□ -1.73
VMA22	YHR060W	STE2	D6VTK4	431 aa		4.21	□□□□□ -1.74
VMA22	YHR060W	ADE4	P04046	510 aa	Known RBP	4.21	□□□□□ -1.74
VMA22	YHR060W	PEP5	P12868	1029 aa		4.21	□□□□□ -1.74
VMA22	YHR060W	THR4	P16120	514 aa	Known RBP	4.21	□□□□□ -1.74
VMA22	YHR060W	YCR006C	P25350	157 aa		4.21	□□□□□ -1.74
VMA22	YHR060W	SPT10	P35208	640 aa		4.21	□□□□□ -1.74
VMA22	YHR060W	ROT2	P38138	954 aa		4.21	□□□□□ -1.74
VMA22	YHR060W	DUG2	P38149	878 aa		4.21	□□□□□ -1.74
VMA22	YHR060W	TCM62	P38228	572 aa	Known RBP	4.21	□□□□□ -1.74
VMA22	YHR060W	MNL1	P38888	796 aa		4.21	□□□□□ -1.74
VMA22	YHR060W	END3	P39013	349 aa		4.21	□□□□□ -1.74
VMA22	YHR060W	MIT1	P40002	666 aa		4.21	□□□□□ -1.74
VMA22	YHR060W	LAM5	P43560	674 aa		4.21	□□□□□ -1.74
VMA22	YHR060W	RPS10B	P46784	105 aa	Known RBP	4.21	□□□□□ -1.74
VMA22	YHR060W	YJR011C	P47086	261 aa	Predicted RBP	4.21	□□□□□ -1.74
VMA22	YHR060W	EMC2	P47133	292 aa	Known RBP	4.21	□□□□□ -1.74
VMA22	YHR060W	ASN1	P49089	572 aa	Known RBP	4.21	□□□□□ -1.74
VMA22	YHR060W	PYK2	P52489	506 aa	Known RBP	4.21	□□□□□ -1.74
VMA22	YHR060W	YTP1	P53584	459 aa		4.21	□□□□□ -1.74
VMA22	YHR060W	ABZ2	Q03266	374 aa		4.21	□□□□□ -1.74
VMA22	YHR060W	EKI1	Q03764	534 aa		4.21	□□□□□ -1.74
VMA22	YHR060W	SNU56	Q03782	492 aa	Known RBP	4.21	□□□□□ -1.74
VMA22	YHR060W	YMR310C	Q04867	317 aa	Predicted RBP	4.21	□□□□□ -1.74
VMA22	YHR060W	YPR078C	Q06813	372 aa		4.21	□□□□□ -1.74
VMA22	YHR060W	IRC10	Q08118	586 aa		4.21	□□□□□ -1.74
VMA22	YHR060W	APC5	Q08683	685 aa		4.21	□□□□□ -1.74
VMA22	YHR060W	SUT2	Q12286	268 aa		4.21	□□□□□ -1.74
VMA22	YHR060W	RRD2	Q12461	358 aa		4.21	□□□□□ -1.74
VMA22	YHR060W	SAC3	P46674	1301 aa		4.21	□□□□□ -1.74
VMA22	YHR060W	VPS63	O13549	108 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	ADE5,7	P07244	802 aa	Known RBP	4.2	□□□□□ -1.74
VMA22	YHR060W	TYR1	P20049	452 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	SAR1	P20606	190 aa	Known RBP	4.2	□□□□□ -1.74
VMA22	YHR060W	CNA1	P23287	553 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	GEX1	P25596	615 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	HMX1	P32339	317 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	COY1	P34237	679 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	OCT1	P35999	772 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	PXL1	P36166	706 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	STV1	P37296	890 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	APD1	P38281	316 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	HSM3	P38348	480 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	LAG1	P38703	411 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	UBA4	P38820	440 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	STN1	P38960	494 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	EXO1	P39875	702 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	GAT2	P40209	560 aa		4.2	□□□□□ -1.74
VMA22	YHR060W	LOC1	P43586	204 aa	Predicted RBP	4.2	□□□□□ -1.74
VMA22	YHR060W	LYS20	P48570	428 aa	Known RBP	4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms