RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W CAR1P00812 333 aaKnown RBP3.48□□□□□ -1.85
CAF130YGR134W ADE4P04046 510 aaKnown RBP3.48□□□□□ -1.85
CAF130YGR134W SPE1P08432 466 aa3.48□□□□□ -1.85
CAF130YGR134W FRS2P15625 503 aaKnown RBP3.48□□□□□ -1.85
CAF130YGR134W PDA1P16387 420 aaKnown RBP3.48□□□□□ -1.85
CAF130YGR134W STE11P23561 717 aa3.48□□□□□ -1.85
CAF130YGR134W SIN4P32259 974 aa3.48□□□□□ -1.85
CAF130YGR134W MEI5P32489 222 aa3.48□□□□□ -1.85
CAF130YGR134W RPC25P35718 212 aa3.48□□□□□ -1.85
CAF130YGR134W NTR2P36118 322 aaPredicted RBP3.48□□□□□ -1.85
CAF130YGR134W HRB1P38922 454 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
CAF130YGR134W YFR018CP43599 363 aa3.48□□□□□ -1.85
CAF130YGR134W NPA3P47122 385 aa3.48□□□□□ -1.85
CAF130YGR134W MTL1P53214 551 aa3.48□□□□□ -1.85
CAF130YGR134W PNG1Q02890 363 aa3.48□□□□□ -1.85
CAF130YGR134W ENT5Q03769 411 aaKnown RBP3.48□□□□□ -1.85
CAF130YGR134W BCP1Q06338 283 aa3.48□□□□□ -1.85
CAF130YGR134W CYK3Q07533 885 aa3.48□□□□□ -1.85
CAF130YGR134W HMI1Q12039 706 aa3.48□□□□□ -1.85
CAF130YGR134W PFK27Q12471 397 aaPredicted RBP3.48□□□□□ -1.85
CAF130YGR134W YCL012CQ8J0M4 134 aa3.48□□□□□ -1.85
CAF130YGR134W DRS2P39524 1355 aa3.48□□□□□ -1.85
CAF130YGR134W RPL3P14126 387 aaKnown RBP3.48□□□□□ -1.85
CAF130YGR134W SAC7P17121 654 aa3.48□□□□□ -1.85
CAF130YGR134W HXT1P32465 570 aa3.48□□□□□ -1.85
CAF130YGR134W CDC5P32562 705 aa3.48□□□□□ -1.85
CAF130YGR134W YBR144CP34215 104 aa3.48□□□□□ -1.85
CAF130YGR134W MAK5P38112 773 aaPredicted RBP3.48□□□□□ -1.85
CAF130YGR134W STP2P38704 541 aa3.48□□□□□ -1.85
CAF130YGR134W RTC3P38804 111 aaPredicted RBP3.48□□□□□ -1.85
CAF130YGR134W PRM9P39551 298 aa3.48□□□□□ -1.85
CAF130YGR134W NMD5P46970 1048 aa3.48□□□□□ -1.85
CAF130YGR134W EMC2P47133 292 aaKnown RBP3.48□□□□□ -1.85
CAF130YGR134W BUL1P48524 976 aa3.48□□□□□ -1.85
CAF130YGR134W RMD9P53140 646 aaKnown RBP3.48□□□□□ -1.85
CAF130YGR134W ATG4P53867 494 aa3.48□□□□□ -1.85
CAF130YGR134W YPL108WQ02872 168 aaPredicted RBP3.48□□□□□ -1.85
CAF130YGR134W URH1Q04179 340 aa3.48□□□□□ -1.85
CAF130YGR134W OPT2Q06593 877 aa3.48□□□□□ -1.85
CAF130YGR134W AI1P03875 834 aa3.48□□□□□ -1.85
CAF130YGR134W ALG1P16661 449 aa3.48□□□□□ -1.85
CAF130YGR134W FPS1P23900 669 aa3.48□□□□□ -1.85
CAF130YGR134W FEN2P25621 512 aaKnown RBP3.48□□□□□ -1.85
CAF130YGR134W CDC20P26309 610 aa3.48□□□□□ -1.85
CAF130YGR134W YUR1P26725 428 aa3.48□□□□□ -1.85
CAF130YGR134W PEX3P28795 441 aa3.48□□□□□ -1.85
CAF130YGR134W HIR2P32480 875 aa3.48□□□□□ -1.85
CAF130YGR134W BCS1P32839 456 aa3.48□□□□□ -1.85
CAF130YGR134W CYM1P32898 989 aa3.48□□□□□ -1.85
CAF130YGR134W MRPL37P36532 105 aa3.48□□□□□ -1.85
CAF130YGR134W CCT2P39076 527 aaKnown RBP3.48□□□□□ -1.85
CAF130YGR134W ELO1P39540 310 aa3.48□□□□□ -1.85
CAF130YGR134W RTC4P53850 401 aa3.48□□□□□ -1.85
CAF130YGR134W BET4Q00618 327 aa3.48□□□□□ -1.85
CAF130YGR134W EKI1Q03764 534 aa3.48□□□□□ -1.85
CAF130YGR134W SSQ1Q05931 657 aaPredicted RBP3.48□□□□□ -1.85
CAF130YGR134W USO1P25386 1790 aa3.47□□□□□ -1.85
CAF130YGR134W RAS1P01119 309 aa3.47□□□□□ -1.85
CAF130YGR134W HCS1P34243 683 aa3.47□□□□□ -1.85
CAF130YGR134W YBR259WP38338 688 aa3.47□□□□□ -1.85
CAF130YGR134W IMD2P38697 523 aaKnown RBP3.47□□□□□ -1.85
CAF130YGR134W YJL193WP39542 402 aa3.47□□□□□ -1.85
CAF130YGR134W YPS6P40583 537 aa3.47□□□□□ -1.85
CAF130YGR134W YFL040WP43562 540 aa3.47□□□□□ -1.85
CAF130YGR134W STE24P47154 453 aa3.47□□□□□ -1.85
CAF130YGR134W MTR3P48240 250 aaPredicted RBP3.47□□□□□ -1.85
CAF130YGR134W YAT1P80235 687 aa3.47□□□□□ -1.85
CAF130YGR134W RNT1Q02555 471 aa3.47□□□□□ -1.85
CAF130YGR134W PDS5Q04264 1277 aa3.47□□□□□ -1.85
CAF130YGR134W CSI1Q04368 295 aa3.47□□□□□ -1.85
CAF130YGR134W HOF1Q05080 669 aa3.47□□□□□ -1.85
CAF130YGR134W YDL242WQ07746 117 aa3.47□□□□□ -1.85
CAF130YGR134W LOT6Q07923 191 aa3.47□□□□□ -1.85
CAF130YGR134W APC2Q12440 853 aa3.47□□□□□ -1.85
CAF130YGR134W RAD61Q99359 647 aa3.47□□□□□ -1.85
CAF130YGR134W ILV2P07342 687 aaKnown RBP3.47□□□□□ -1.85
CAF130YGR134W SIR4P11978 1358 aa3.47□□□□□ -1.85
CAF130YGR134W YPK2P18961 677 aa3.47□□□□□ -1.85
CAF130YGR134W PPH22P23595 377 aa3.47□□□□□ -1.85
CAF130YGR134W CIN8P27895 1000 aa3.47□□□□□ -1.85
CAF130YGR134W TOA2P32774 122 aa3.47□□□□□ -1.85
CAF130YGR134W KKQ8P36004 724 aa3.47□□□□□ -1.85
CAF130YGR134W SLN1P39928 1220 aaPredicted RBP3.47□□□□□ -1.85
CAF130YGR134W FKH2P41813 862 aa3.47□□□□□ -1.85
CAF130YGR134W GLG2P47011 380 aa3.47□□□□□ -1.85
CAF130YGR134W PET117Q02771 107 aa3.47□□□□□ -1.85
CAF130YGR134W MFM1Q02783 413 aa3.47□□□□□ -1.85
CAF130YGR134W YDR239CQ03780 787 aa3.47□□□□□ -1.85
CAF130YGR134W CFT1Q06632 1357 aaKnown RBP3.47□□□□□ -1.85
CAF130YGR134W IPK1Q06667 281 aa3.47□□□□□ -1.85
CAF130YGR134W YPR022CQ12139 1133 aa3.47□□□□□ -1.85
CAF130YGR134W YBR085C-AO43137 85 aa3.46□□□□□ -1.85
CAF130YGR134W ERG20P08524 352 aaKnown RBP3.46□□□□□ -1.85
CAF130YGR134W CNE1P27825 502 aa3.46□□□□□ -1.85
CAF130YGR134W ICL1P28240 557 aaPredicted RBP3.46□□□□□ -1.85
CAF130YGR134W CWP1P28319 239 aa3.46□□□□□ -1.85
CAF130YGR134W ITR1P30605 584 aa3.46□□□□□ -1.85
CAF130YGR134W MCM4P30665 933 aaKnown RBP3.46□□□□□ -1.85
CAF130YGR134W SIP1P32578 815 aa3.46□□□□□ -1.85
CAF130YGR134W DSS4P32601 143 aa3.46□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms