RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W ELP3Q02908 557 aaKnown RBP1.33□□□□□ -2.2
CUL3YGR003W RRI2Q12348 645 aa1.33□□□□□ -2.2
CUL3YGR003W PGA3Q12746 312 aaKnown RBP1.33□□□□□ -2.2
CUL3YGR003W HEM15P16622 393 aa1.32□□□□□ -2.2
CUL3YGR003W SPB1P25582 841 aaPredicted RBP1.32□□□□□ -2.2
CUL3YGR003W NDI1P32340 513 aa1.32□□□□□ -2.2
CUL3YGR003W SEC66P33754 206 aa1.32□□□□□ -2.2
CUL3YGR003W POP1P41812 875 aa1.32□□□□□ -2.2
CUL3YGR003W OCA1P50946 238 aaPredicted RBP1.32□□□□□ -2.2
CUL3YGR003W SEC39Q12745 709 aa1.32□□□□□ -2.2
CUL3YGR003W ADH2P00331 348 aaKnown RBP1.32□□□□□ -2.2
CUL3YGR003W SEC63P14906 663 aa1.32□□□□□ -2.2
CUL3YGR003W HSC82P15108 705 aaKnown RBP1.32□□□□□ -2.2
CUL3YGR003W PPH22P23595 377 aa1.32□□□□□ -2.2
CUL3YGR003W CPR4P25334 318 aa1.32□□□□□ -2.2
CUL3YGR003W PAP1P29468 568 aaKnown RBP1.32□□□□□ -2.2
CUL3YGR003W HXT3P32466 567 aaKnown RBP1.32□□□□□ -2.2
CUL3YGR003W MRP4P32902 394 aa1.32□□□□□ -2.2
CUL3YGR003W SWE1P32944 819 aa1.32□□□□□ -2.2
CUL3YGR003W NDE1P40215 560 aa1.32□□□□□ -2.2
CUL3YGR003W PRE5P40302 234 aaKnown RBP1.32□□□□□ -2.2
CUL3YGR003W ESL1P40456 1118 aa1.32□□□□□ -2.2
CUL3YGR003W OST1P41543 476 aaKnown RBP1.32□□□□□ -2.2
CUL3YGR003W SYF1Q04048 859 aaPredicted RBP1.32□□□□□ -2.2
CUL3YGR003W YLR278CQ05854 1341 aa1.31□□□□□ -2.2
CUL3YGR003W LPD1P09624 499 aaKnown RBP1.31□□□□□ -2.2
CUL3YGR003W SAM1P10659 382 aaKnown RBP1.31□□□□□ -2.2
CUL3YGR003W SAM2P19358 384 aaKnown RBP1.31□□□□□ -2.2
CUL3YGR003W ROX1P25042 368 aa1.31□□□□□ -2.2
CUL3YGR003W YCR100CP25606 316 aa1.31□□□□□ -2.2
CUL3YGR003W CMC1P36064 111 aa1.31□□□□□ -2.2
CUL3YGR003W YCR041WP37265 110 aa1.31□□□□□ -2.2
CUL3YGR003W ELP2P42935 788 aa1.31□□□□□ -2.2
CUL3YGR003W TIS11P47977 285 aa1.31□□□□□ -2.2
CUL3YGR003W YGR149WP48236 432 aa1.31□□□□□ -2.2
CUL3YGR003W POP6P53218 158 aa1.31□□□□□ -2.2
CUL3YGR003W TWF1P53250 332 aa1.31□□□□□ -2.2
CUL3YGR003W HXT11P54862 567 aa1.31□□□□□ -2.2
CUL3YGR003W RPA49Q01080 415 aaPredicted RBP1.31□□□□□ -2.2
CUL3YGR003W RPT6Q01939 405 aaKnown RBP1.31□□□□□ -2.2
CUL3YGR003W PBA1Q05778 276 aa1.31□□□□□ -2.2
CUL3YGR003W TMC1Q08422 150 aaPredicted RBP1.31□□□□□ -2.2
CUL3YGR003W ATG29Q12092 213 aa1.31□□□□□ -2.2
CUL3YGR003W YPR022CQ12139 1133 aa1.31□□□□□ -2.2
CUL3YGR003W ISN1Q99312 450 aa1.31□□□□□ -2.2
CUL3YGR003W YML133CQ03099 1374 aa1.31□□□□□ -2.2
CUL3YGR003W YLL067CQ07888 1374 aa1.31□□□□□ -2.2
CUL3YGR003W YLL066CQ99208 1374 aa1.31□□□□□ -2.2
CUL3YGR003W ILV5P06168 395 aaKnown RBP1.31□□□□□ -2.2
CUL3YGR003W RPS8AP0CX39 200 aaKnown RBP1.31□□□□□ -2.2
CUL3YGR003W RPS8BP0CX40 200 aaKnown RBP1.31□□□□□ -2.2
CUL3YGR003W EXO70P19658 623 aa1.31□□□□□ -2.2
CUL3YGR003W ISY1P21374 235 aaPredicted RBP1.31□□□□□ -2.2
CUL3YGR003W OCA4P25366 362 aa1.31□□□□□ -2.2
CUL3YGR003W IDH2P28241 369 aaKnown RBP1.31□□□□□ -2.2
CUL3YGR003W AFG1P32317 509 aa1.31□□□□□ -2.2
CUL3YGR003W PRP21P32524 280 aaPredicted RBP1.31□□□□□ -2.2
CUL3YGR003W NIP100P33420 868 aa1.31□□□□□ -2.2
CUL3YGR003W NDT80P38830 627 aa1.31□□□□□ -2.2
CUL3YGR003W SMF1P38925 575 aa1.31□□□□□ -2.2
CUL3YGR003W HXT14P42833 540 aa1.31□□□□□ -2.2
CUL3YGR003W IRC6P43615 237 aa1.31□□□□□ -2.2
CUL3YGR003W PCP1P53259 346 aa1.31□□□□□ -2.2
CUL3YGR003W YGR250CP53316 781 aaKnown RBP1.31□□□□□ -2.2
CUL3YGR003W SIL1Q08199 421 aa1.31□□□□□ -2.2
CUL3YGR003W LEU4P06208 619 aaKnown RBP1.3□□□□□ -2.2
CUL3YGR003W SPT15P13393 240 aaKnown RBP1.3□□□□□ -2.2
CUL3YGR003W GEX1P25596 615 aa1.3□□□□□ -2.2
CUL3YGR003W CDC60P26637 1090 aaKnown RBP1.3□□□□□ -2.2
CUL3YGR003W SAS3P34218 831 aa1.3□□□□□ -2.2
CUL3YGR003W NAT2P37293 288 aa1.3□□□□□ -2.2
CUL3YGR003W MIX23P38162 196 aa1.3□□□□□ -2.2
CUL3YGR003W VID24P38263 362 aa1.3□□□□□ -2.2
CUL3YGR003W YIP1P53039 248 aa1.3□□□□□ -2.2
CUL3YGR003W CAF40P53829 373 aa1.3□□□□□ -2.2
CUL3YGR003W TOF1P53840 1238 aa1.3□□□□□ -2.2
CUL3YGR003W ODC1Q03028 310 aa1.3□□□□□ -2.2
CUL3YGR003W YDR387CQ04162 555 aa1.3□□□□□ -2.2
CUL3YGR003W MDM30Q05930 598 aa1.3□□□□□ -2.2
CUL3YGR003W TSR1Q07381 788 aaKnown RBP1.3□□□□□ -2.2
CUL3YGR003W HRT3Q12347 344 aa1.3□□□□□ -2.2
CUL3YGR003W AHC1Q12433 566 aa1.3□□□□□ -2.2
CUL3YGR003W RRP12Q12754 1228 aaKnown RBP1.3□□□□□ -2.2
CUL3YGR003W SNT1P25357 1226 aa1.3□□□□□ -2.2
CUL3YGR003W DEG1P31115 442 aaKnown RBP1.3□□□□□ -2.2
CUL3YGR003W ERG3P32353 365 aa1.3□□□□□ -2.2
CUL3YGR003W YEL045CP32616 141 aa1.3□□□□□ -2.2
CUL3YGR003W RFC3P38629 340 aa1.3□□□□□ -2.2
CUL3YGR003W MST28P39552 234 aa1.3□□□□□ -2.2
CUL3YGR003W TFG2P41896 400 aaPredicted RBP1.3□□□□□ -2.2
CUL3YGR003W SSU1P41930 458 aa1.3□□□□□ -2.2
CUL3YGR003W ARX1Q03862 593 aaKnown RBP1.3□□□□□ -2.2
CUL3YGR003W TAF11Q04226 346 aa1.3□□□□□ -2.2
CUL3YGR003W MHR1Q06630 226 aa1.3□□□□□ -2.2
CUL3YGR003W ESA1Q08649 445 aa1.3□□□□□ -2.2
CUL3YGR003W RBD2Q12270 262 aa1.3□□□□□ -2.2
CUL3YGR003W CYC3P06182 269 aa1.29□□□□□ -2.2
CUL3YGR003W RIP1P08067 215 aa1.29□□□□□ -2.2
CUL3YGR003W RPL3P14126 387 aaKnown RBP1.29□□□□□ -2.2
CUL3YGR003W CKA1P15790 372 aa1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms