RNA–Protein interactions for RNA: YGL238W

CSE1, Transcript of Nuclear envelope protein that mediates the nuclear export of Srp1p, yeastyeast

Gene CSE1, Length 2,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSE1YGL238W YGL082WP53155 381 aa0.45□□□□□ -2.34
CSE1YGL238W CAF40P53829 373 aa0.45□□□□□ -2.34
CSE1YGL238W REG1Q00816 1014 aa0.45□□□□□ -2.34
CSE1YGL238W EMI2Q04409 500 aaKnown RBP0.45□□□□□ -2.34
CSE1YGL238W HRI1Q05905 244 aaKnown RBP0.45□□□□□ -2.34
CSE1YGL238W VPS74Q06385 345 aa0.45□□□□□ -2.34
CSE1YGL238W YSP2Q06681 1438 aa0.45□□□□□ -2.34
CSE1YGL238W TEN1Q07921 160 aa0.45□□□□□ -2.34
CSE1YGL238W ADH1P00330 348 aaKnown RBP0.45□□□□□ -2.34
CSE1YGL238W RPL19AP0CX82 189 aaKnown RBP0.45□□□□□ -2.34
CSE1YGL238W RPL19BP0CX83 189 aaPredicted RBP0.45□□□□□ -2.34
CSE1YGL238W SMY1P32364 656 aaKnown RBP0.45□□□□□ -2.34
CSE1YGL238W ATP11P32453 318 aa0.45□□□□□ -2.34
CSE1YGL238W GLC7P32598 312 aaKnown RBP0.45□□□□□ -2.34
CSE1YGL238W ROT2P38138 954 aa0.45□□□□□ -2.34
CSE1YGL238W AFG3P39925 761 aa0.45□□□□□ -2.34
CSE1YGL238W ACA1P39970 489 aa0.45□□□□□ -2.34
CSE1YGL238W HIS6P40545 261 aa0.45□□□□□ -2.34
CSE1YGL238W IBD2P53892 351 aa0.45□□□□□ -2.34
CSE1YGL238W KTR5P53966 522 aaPredicted RBP0.45□□□□□ -2.34
CSE1YGL238W HEF3P53978 1044 aaKnown RBP0.45□□□□□ -2.34
CSE1YGL238W CSR1Q06705 408 aaKnown RBP0.45□□□□□ -2.34
CSE1YGL238W RTP1Q12751 981 aa0.45□□□□□ -2.34
CSE1YGL238W TY1B-DR3Q99231 1755 aa0.45□□□□□ -2.34
CSE1YGL238W APC1P53886 1748 aa0.45□□□□□ -2.34
CSE1YGL238W PET123P17558 318 aa0.44□□□□□ -2.34
CSE1YGL238W YCK1P23291 538 aa0.44□□□□□ -2.34
CSE1YGL238W YBR225WP38321 900 aa0.44□□□□□ -2.34
CSE1YGL238W DBP8P38719 431 aa0.44□□□□□ -2.34
CSE1YGL238W SYG1P40528 902 aa0.44□□□□□ -2.34
CSE1YGL238W IST3P40565 148 aaPredicted RBP0.44□□□□□ -2.34
CSE1YGL238W VMA13P41807 478 aaKnown RBP0.44□□□□□ -2.34
CSE1YGL238W OCA1P50946 238 aaPredicted RBP0.44□□□□□ -2.34
CSE1YGL238W PIR3Q03180 325 aa0.44□□□□□ -2.34
CSE1YGL238W GLO2Q05584 274 aa0.44□□□□□ -2.34
CSE1YGL238W SKG3Q06315 1026 aa0.44□□□□□ -2.34
CSE1YGL238W RIX7Q07844 837 aaKnown RBP0.44□□□□□ -2.34
CSE1YGL238W APL4Q12028 832 aa0.44□□□□□ -2.34
CSE1YGL238W RAD61Q99359 647 aa0.44□□□□□ -2.34
CSE1YGL238W MSM1P22438 575 aa0.44□□□□□ -2.34
CSE1YGL238W YKL023WP36103 277 aaKnown RBP0.44□□□□□ -2.34
CSE1YGL238W MST28P39552 234 aa0.44□□□□□ -2.34
CSE1YGL238W NNF2P53253 936 aa0.44□□□□□ -2.34
CSE1YGL238W HST1P53685 503 aa0.44□□□□□ -2.34
CSE1YGL238W CBK1P53894 756 aa0.44□□□□□ -2.34
CSE1YGL238W SHR3Q02774 210 aa0.44□□□□□ -2.34
CSE1YGL238W TAP42Q04372 366 aa0.44□□□□□ -2.34
CSE1YGL238W MRD1Q06106 887 aaKnown RBP0.44□□□□□ -2.34
CSE1YGL238W CUE5Q08412 411 aaKnown RBP0.44□□□□□ -2.34
CSE1YGL238W PLP2Q12017 286 aa0.44□□□□□ -2.34
CSE1YGL238W LEU9Q12166 604 aaKnown RBP0.44□□□□□ -2.34
CSE1YGL238W HSH49Q99181 213 aaPredicted RBP0.44□□□□□ -2.34
CSE1YGL238W PDR11P40550 1411 aa0.44□□□□□ -2.34
CSE1YGL238W YLL066CQ99208 1374 aa0.44□□□□□ -2.34
CSE1YGL238W CAR1P00812 333 aaKnown RBP0.43□□□□□ -2.34
CSE1YGL238W ADH7P25377 361 aa0.43□□□□□ -2.34
CSE1YGL238W RAD16P31244 790 aa0.43□□□□□ -2.34
CSE1YGL238W ECM25P32525 599 aa0.43□□□□□ -2.34
CSE1YGL238W PRY2P36110 329 aa0.43□□□□□ -2.34
CSE1YGL238W ODC1Q03028 310 aa0.43□□□□□ -2.34
CSE1YGL238W YLL032CQ07834 825 aaKnown RBP RIP-Chip data0.43□□□□□ -2.34not detected
CSE1YGL238W SDH5Q08230 162 aa0.43□□□□□ -2.34
CSE1YGL238W PRP8P33334 2413 aaKnown RBP0.43□□□□□ -2.34
CSE1YGL238W YEF3P16521 1044 aaKnown RBP0.43□□□□□ -2.34
CSE1YGL238W YKL097CP34245 136 aa0.43□□□□□ -2.34
CSE1YGL238W STB6P36085 766 aa0.43□□□□□ -2.34
CSE1YGL238W ALY1P36117 915 aa0.43□□□□□ -2.34
CSE1YGL238W RPS7BP48164 190 aaKnown RBP0.43□□□□□ -2.34
CSE1YGL238W IVY1Q04934 453 aa0.43□□□□□ -2.34
CSE1YGL238W YLR108CQ12259 485 aa0.43□□□□□ -2.34
CSE1YGL238W IQG1Q12280 1495 aa0.43□□□□□ -2.34
CSE1YGL238W YBR085C-AO43137 85 aa0.43□□□□□ -2.34
CSE1YGL238W PRP2P20095 876 aaPredicted RBP0.43□□□□□ -2.34
CSE1YGL238W GEX1P25596 615 aa0.43□□□□□ -2.34
CSE1YGL238W NDI1P32340 513 aa0.43□□□□□ -2.34
CSE1YGL238W GCD7P32502 381 aaPredicted RBP0.43□□□□□ -2.34
CSE1YGL238W SSE2P32590 693 aaKnown RBP0.43□□□□□ -2.34
CSE1YGL238W AGA2P32781 87 aa0.43□□□□□ -2.34
CSE1YGL238W NUP120P35729 1037 aa0.43□□□□□ -2.34
CSE1YGL238W PTK1P36002 662 aaPredicted RBP0.43□□□□□ -2.34
CSE1YGL238W KKQ8P36004 724 aa0.43□□□□□ -2.34
CSE1YGL238W VID24P38263 362 aa0.43□□□□□ -2.34
CSE1YGL238W OST1P41543 476 aaKnown RBP0.43□□□□□ -2.34
CSE1YGL238W PFS2P42841 465 aaKnown RBP0.43□□□□□ -2.34
CSE1YGL238W HER2Q03557 464 aa0.43□□□□□ -2.34
CSE1YGL238W VID22Q05934 901 aa0.43□□□□□ -2.34
CSE1YGL238W DNL4Q08387 944 aaPredicted RBP0.43□□□□□ -2.34
CSE1YGL238W LSP1Q12230 341 aaKnown RBP0.43□□□□□ -2.34
CSE1YGL238W YOL085CQ99345 113 aa0.43□□□□□ -2.34
CSE1YGL238W TY4B-JP47024 1803 aa0.42□□□□□ -2.34
CSE1YGL238W ATP4P05626 244 aa0.42□□□□□ -2.34
CSE1YGL238W ARD1P07347 238 aaPredicted RBP0.42□□□□□ -2.34
CSE1YGL238W PTP2P29461 750 aa0.42□□□□□ -2.34
CSE1YGL238W IME2P32581 645 aa0.42□□□□□ -2.34
CSE1YGL238W SKI2P35207 1287 aaKnown RBP RIP-Chip data0.42□□□□□ -2.34not detected
CSE1YGL238W FRE2P36033 711 aa0.42□□□□□ -2.34
CSE1YGL238W NAT2P37293 288 aa0.42□□□□□ -2.34
CSE1YGL238W CCT2P39076 527 aaKnown RBP0.42□□□□□ -2.34
CSE1YGL238W PTI1P39927 425 aaPredicted RBP0.42□□□□□ -2.34
CSE1YGL238W YER010CP40011 234 aa0.42□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 10 ms