RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W MSC1Q03104 513 aa1.46□□□□□ -2.18
YCK3YER123W TY3B-IQ7LHG5 1498 aaKnown RBP1.46□□□□□ -2.18
YCK3YER123W MF(ALPHA)1P01149 165 aa1.45□□□□□ -2.18
YCK3YER123W RAD52P06778 471 aaKnown RBP1.45□□□□□ -2.18
YCK3YER123W NAM9P27929 486 aa1.45□□□□□ -2.18
YCK3YER123W SSE2P32590 693 aaKnown RBP1.45□□□□□ -2.18
YCK3YER123W UTR4P32626 227 aa1.45□□□□□ -2.18
YCK3YER123W MAL33P38157 468 aa1.45□□□□□ -2.18
YCK3YER123W NDT80P38830 627 aa1.45□□□□□ -2.18
YCK3YER123W CIN4P39110 191 aa1.45□□□□□ -2.18
YCK3YER123W YGR210CP42942 411 aa1.45□□□□□ -2.18
YCK3YER123W ARC1P46672 376 aaKnown RBP1.45□□□□□ -2.18
YCK3YER123W SIP4P46954 829 aa1.45□□□□□ -2.18
YCK3YER123W YLR152CP54072 576 aa1.45□□□□□ -2.18
YCK3YER123W RAD30Q04049 632 aa1.45□□□□□ -2.18
YCK3YER123W BUD22Q04347 519 aaKnown RBP1.45□□□□□ -2.18
YCK3YER123W YOR365CQ08844 703 aa1.45□□□□□ -2.18
YCK3YER123W NCE102Q12207 173 aaRIP-Chip data1.45□□□□□ -2.18not detected
YCK3YER123W RAD9P14737 1309 aa1.45□□□□□ -2.18
YCK3YER123W ROM2P51862 1356 aaKnown RBP1.45□□□□□ -2.18
YCK3YER123W GSC2P40989 1895 aa1.45□□□□□ -2.18
YCK3YER123W MEC1P38111 2368 aa1.44□□□□□ -2.18
YCK3YER123W FIG2P25653 1609 aa1.44□□□□□ -2.18
YCK3YER123W CFT1Q06632 1357 aaKnown RBP1.44□□□□□ -2.18
YCK3YER123W HHF1P02309 103 aaKnown RBP1.44□□□□□ -2.18
YCK3YER123W SUP35P05453 685 aaKnown RBP1.44□□□□□ -2.18
YCK3YER123W CDC24P11433 854 aaPredicted RBP1.44□□□□□ -2.18
YCK3YER123W YIH1P25637 258 aa1.44□□□□□ -2.18
YCK3YER123W YIM1P28625 365 aa1.44□□□□□ -2.18
YCK3YER123W MRP4P32902 394 aa1.44□□□□□ -2.18
YCK3YER123W YBR144CP34215 104 aa1.44□□□□□ -2.18
YCK3YER123W AFG3P39925 761 aa1.44□□□□□ -2.18
YCK3YER123W YIL067CP40514 678 aa1.44□□□□□ -2.18
YCK3YER123W GWT1P47026 490 aa1.44□□□□□ -2.18
YCK3YER123W DRN1P53255 507 aaKnown RBP1.44□□□□□ -2.18
YCK3YER123W BSC5P53755 489 aa1.44□□□□□ -2.18
YCK3YER123W CBK1P53894 756 aa1.44□□□□□ -2.18
YCK3YER123W ELP3Q02908 557 aaKnown RBP1.44□□□□□ -2.18
YCK3YER123W RRN11Q04712 507 aa1.44□□□□□ -2.18
YCK3YER123W PHO92Q06390 306 aa1.44□□□□□ -2.18
YCK3YER123W ERV2Q12284 196 aa1.44□□□□□ -2.18
YCK3YER123W SKM1Q12469 655 aa1.44□□□□□ -2.18
YCK3YER123W HSH49Q99181 213 aaPredicted RBP1.44□□□□□ -2.18
YCK3YER123W TRA1P38811 3744 aa1.44□□□□□ -2.18
YCK3YER123W RPL40AP0CH08 128 aaKnown RBP1.43□□□□□ -2.18
YCK3YER123W RPL40BP0CH09 128 aaKnown RBP1.43□□□□□ -2.18
YCK3YER123W ISY1P21374 235 aaPredicted RBP1.43□□□□□ -2.18
YCK3YER123W ARO2P28777 376 aaKnown RBP1.43□□□□□ -2.18
YCK3YER123W AUR1P36107 401 aaPredicted RBP1.43□□□□□ -2.18
YCK3YER123W YFL067WP43537 175 aa1.43□□□□□ -2.18
YCK3YER123W GPI1P53306 609 aa1.43□□□□□ -2.18
YCK3YER123W CAF40P53829 373 aa1.43□□□□□ -2.18
YCK3YER123W YML037CQ03703 340 aa1.43□□□□□ -2.18
YCK3YER123W PBA1Q05778 276 aa1.43□□□□□ -2.18
YCK3YER123W LUC7Q07508 261 aaPredicted RBP1.43□□□□□ -2.18
YCK3YER123W FMP40Q08968 688 aaPredicted RBP1.43□□□□□ -2.18
YCK3YER123W YPL272CQ08984 517 aa1.43□□□□□ -2.18
YCK3YER123W AHC1Q12433 566 aa1.43□□□□□ -2.18
YCK3YER123W UBR2Q07963 1872 aa1.43□□□□□ -2.18
YCK3YER123W SPT7P35177 1332 aa1.43□□□□□ -2.18
YCK3YER123W SUC2P00724 532 aa1.42□□□□□ -2.18
YCK3YER123W HIP1P06775 603 aa1.42□□□□□ -2.18
YCK3YER123W PEP4P07267 405 aaKnown RBP1.42□□□□□ -2.18
YCK3YER123W FUM1P08417 488 aaKnown RBP1.42□□□□□ -2.18
YCK3YER123W HEM15P16622 393 aa1.42□□□□□ -2.18
YCK3YER123W UBP11P36026 717 aa1.42□□□□□ -2.18
YCK3YER123W RRN3P36070 627 aa1.42□□□□□ -2.18
YCK3YER123W IES5P40060 125 aa1.42□□□□□ -2.18
YCK3YER123W ALK1P43633 760 aaKnown RBP1.42□□□□□ -2.18
YCK3YER123W ARK1P53974 638 aa1.42□□□□□ -2.18
YCK3YER123W YSA1Q01976 231 aa1.42□□□□□ -2.18
YCK3YER123W PIR3Q03180 325 aa1.42□□□□□ -2.18
YCK3YER123W VIP1Q06685 1146 aaKnown RBP1.42□□□□□ -2.18
YCK3YER123W THP1Q08231 455 aa1.42□□□□□ -2.18
YCK3YER123W ESA1Q08649 445 aa1.42□□□□□ -2.18
YCK3YER123W RRG7Q08774 242 aaPredicted RBP1.42□□□□□ -2.18
YCK3YER123W TMS1Q12116 473 aa1.42□□□□□ -2.18
YCK3YER123W KAR3P17119 729 aa1.42□□□□□ -2.18
YCK3YER123W ART10P18634 518 aaKnown RBP1.42□□□□□ -2.18
YCK3YER123W PAH1P32567 862 aa1.42□□□□□ -2.18
YCK3YER123W SHP1P34223 423 aa1.42□□□□□ -2.18
YCK3YER123W BNA4P38169 460 aa1.42□□□□□ -2.18
YCK3YER123W TIF4631P39935 952 aaKnown RBP1.42□□□□□ -2.18
YCK3YER123W FAU1P40099 211 aa1.42□□□□□ -2.18
YCK3YER123W VID30P53076 958 aa1.42□□□□□ -2.18
YCK3YER123W RBS1Q05672 457 aaKnown RBP1.42□□□□□ -2.18
YCK3YER123W CFT2Q12102 859 aaPredicted RBP1.42□□□□□ -2.18
YCK3YER123W HRT3Q12347 344 aa1.42□□□□□ -2.18
YCK3YER123W YRF1-4O13559 1382 aa1.41□□□□□ -2.18
YCK3YER123W CLN3P13365 580 aa1.41□□□□□ -2.18
YCK3YER123W GLK1P17709 500 aaKnown RBP1.41□□□□□ -2.18
YCK3YER123W POL4P25615 582 aa1.41□□□□□ -2.18
YCK3YER123W SWD3P38123 315 aa1.41□□□□□ -2.18
YCK3YER123W DUG2P38149 878 aa1.41□□□□□ -2.18
YCK3YER123W YBL029WP38201 376 aa1.41□□□□□ -2.18
YCK3YER123W TCM62P38228 572 aaKnown RBP1.41□□□□□ -2.18
YCK3YER123W TPM2P40414 161 aa1.41□□□□□ -2.18
YCK3YER123W DPH1P40487 425 aaKnown RBP1.41□□□□□ -2.18
YCK3YER123W TOF2Q02208 771 aa1.41□□□□□ -2.18
YCK3YER123W ATG16Q03818 150 aa1.41□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms