RNA–Protein interactions for RNA: YER116C

SLX8, Transcript of Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex, yeast

Gene SLX8, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX8	YER116C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.95	□□□□□ -1.78	not detected
SLX8	YER116C	IMD2	P38697	523 aa	Known RBP	3.95	□□□□□ -1.78
SLX8	YER116C	LNP1	P38878	278 aa		3.95	□□□□□ -1.78
SLX8	YER116C	TOS3	P43637	560 aa		3.95	□□□□□ -1.78
SLX8	YER116C	YJL118W	P47022	219 aa		3.95	□□□□□ -1.78
SLX8	YER116C	ASN2	P49090	572 aa	Known RBP	3.95	□□□□□ -1.78
SLX8	YER116C	YNL146W	P53906	100 aa		3.95	□□□□□ -1.78
SLX8	YER116C	EFM6	P53970	246 aa		3.95	□□□□□ -1.78
SLX8	YER116C	STD1	Q02794	444 aa		3.95	□□□□□ -1.78
SLX8	YER116C	YMR160W	Q03823	816 aa		3.95	□□□□□ -1.78
SLX8	YER116C	RSM24	Q03976	319 aa		3.95	□□□□□ -1.78
SLX8	YER116C	APC4	Q04601	652 aa		3.95	□□□□□ -1.78
SLX8	YER116C	FUS2	Q05670	677 aa		3.95	□□□□□ -1.78
SLX8	YER116C	CTS2	Q06350	511 aa		3.95	□□□□□ -1.78
SLX8	YER116C	MRPL35	Q06678	367 aa		3.95	□□□□□ -1.78
SLX8	YER116C	BRX1	Q08235	291 aa	Known RBP	3.95	□□□□□ -1.78
SLX8	YER116C	MRH1	Q12117	320 aa	Predicted RBP	3.95	□□□□□ -1.78
SLX8	YER116C	RRD2	Q12461	358 aa		3.95	□□□□□ -1.78
SLX8	YER116C	PUT2	P07275	575 aa		3.94	□□□□□ -1.78
SLX8	YER116C	SPS4	P09937	338 aa		3.94	□□□□□ -1.78
SLX8	YER116C	PEP5	P12868	1029 aa		3.94	□□□□□ -1.78
SLX8	YER116C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.94	□□□□□ -1.78	not detected
SLX8	YER116C	YUR1	P26725	428 aa		3.94	□□□□□ -1.78
SLX8	YER116C	GSY2	P27472	705 aa		3.94	□□□□□ -1.78
SLX8	YER116C	ECM25	P32525	599 aa		3.94	□□□□□ -1.78
SLX8	YER116C	ECT1	P33412	323 aa		3.94	□□□□□ -1.78
SLX8	YER116C	NTR2	P36118	322 aa	Predicted RBP	3.94	□□□□□ -1.78
SLX8	YER116C	NUP133	P36161	1157 aa		3.94	□□□□□ -1.78
SLX8	YER116C	ASC1	P38011	319 aa	Known RBP	3.94	□□□□□ -1.78
SLX8	YER116C	PPS1	P38148	807 aa		3.94	□□□□□ -1.78
SLX8	YER116C	SMF2	P38778	549 aa		3.94	□□□□□ -1.78
SLX8	YER116C	ARO9	P38840	513 aa	Predicted RBP	3.94	□□□□□ -1.78
SLX8	YER116C	ALP1	P38971	573 aa		3.94	□□□□□ -1.78
SLX8	YER116C	PRM9	P39551	298 aa		3.94	□□□□□ -1.78
SLX8	YER116C	MTW1	P39731	289 aa		3.94	□□□□□ -1.78
SLX8	YER116C	ATM1	P40416	690 aa		3.94	□□□□□ -1.78
SLX8	YER116C	FAR3	P46671	204 aa		3.94	□□□□□ -1.78
SLX8	YER116C	RFX1	P48743	811 aa		3.94	□□□□□ -1.78
SLX8	YER116C	TEX1	P53851	422 aa	Known RBP	3.94	□□□□□ -1.78
SLX8	YER116C	YDR541C	Q03049	344 aa		3.94	□□□□□ -1.78
SLX8	YER116C	TAF12	Q03761	539 aa		3.94	□□□□□ -1.78
SLX8	YER116C	NDL1	Q06568	189 aa		3.94	□□□□□ -1.78
SLX8	YER116C	YFT2	Q06676	274 aa		3.94	□□□□□ -1.78
SLX8	YER116C	FRE5	Q08908	694 aa		3.94	□□□□□ -1.78
SLX8	YER116C	PUS9	Q12069	462 aa		3.94	□□□□□ -1.78
SLX8	YER116C	YVC1	Q12324	675 aa		3.94	□□□□□ -1.78
SLX8	YER116C	SWM1	Q12379	170 aa		3.94	□□□□□ -1.78
SLX8	YER116C	YER175W-A	Q8TGU4	54 aa		3.94	□□□□□ -1.78
SLX8	YER116C	LAG2	Q92325	660 aa		3.94	□□□□□ -1.78
SLX8	YER116C	SRN2	Q99176	213 aa		3.94	□□□□□ -1.78
SLX8	YER116C	YOS9	Q99220	542 aa		3.94	□□□□□ -1.78
SLX8	YER116C	RPL31B	P0C2H9	113 aa	Known RBP	3.93	□□□□□ -1.78
SLX8	YER116C	YMR085W	P0CF18	432 aa		3.93	□□□□□ -1.78
SLX8	YER116C	ALG1	P16661	449 aa		3.93	□□□□□ -1.78
SLX8	YER116C	PMA2	P19657	947 aa		3.93	□□□□□ -1.78
SLX8	YER116C	HXT2	P23585	541 aa		3.93	□□□□□ -1.78
SLX8	YER116C	DAL2	P25335	343 aa		3.93	□□□□□ -1.78
SLX8	YER116C	FEN2	P25621	512 aa	Known RBP	3.93	□□□□□ -1.78
SLX8	YER116C	CWP1	P28319	239 aa		3.93	□□□□□ -1.78
SLX8	YER116C	YPS1	P32329	569 aa		3.93	□□□□□ -1.78
SLX8	YER116C	GDH2	P33327	1092 aa	Known RBP	3.93	□□□□□ -1.78
SLX8	YER116C	MAK5	P38112	773 aa	Predicted RBP	3.93	□□□□□ -1.78
SLX8	YER116C	SPP381	P38282	291 aa	Predicted RBP	3.93	□□□□□ -1.78
SLX8	YER116C	DIA4	P38705	446 aa	Predicted RBP	3.93	□□□□□ -1.78
SLX8	YER116C	PLB1	P39105	664 aa		3.93	□□□□□ -1.78
SLX8	YER116C	ECM1	P39715	212 aa		3.93	□□□□□ -1.78
SLX8	YER116C	YMR147W	P40218	223 aa	Known RBP	3.93	□□□□□ -1.78
SLX8	YER116C	YIR042C	P40586	236 aa		3.93	□□□□□ -1.78
SLX8	YER116C	OYE3	P41816	400 aa	Predicted RBP	3.93	□□□□□ -1.78
SLX8	YER116C	HIT1	P46973	164 aa		3.93	□□□□□ -1.78
SLX8	YER116C	DPB11	P47027	764 aa	Predicted RBP	3.93	□□□□□ -1.78
SLX8	YER116C	HAM1	P47119	197 aa	Known RBP	3.93	□□□□□ -1.78
SLX8	YER116C	YNL260C	P53846	198 aa		3.93	□□□□□ -1.78
SLX8	YER116C	BET4	Q00618	327 aa		3.93	□□□□□ -1.78
SLX8	YER116C	MYO5	Q04439	1219 aa	Known RBP	3.93	□□□□□ -1.78
SLX8	YER116C	YMR310C	Q04867	317 aa	Predicted RBP	3.93	□□□□□ -1.78
SLX8	YER116C	COX20	Q04935	205 aa		3.93	□□□□□ -1.78
SLX8	YER116C	IPK1	Q06667	281 aa		3.93	□□□□□ -1.78
SLX8	YER116C	SMC5	Q08204	1093 aa		3.93	□□□□□ -1.78
SLX8	YER116C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.93	□□□□□ -1.78	not detected
SLX8	YER116C	VIK1	Q12045	647 aa		3.93	□□□□□ -1.78
SLX8	YER116C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.93	□□□□□ -1.78	not detected
SLX8	YER116C	SPO24	Q3E752	67 aa		3.93	□□□□□ -1.78
SLX8	YER116C	YBR255C-A	Q3E776	120 aa		3.93	□□□□□ -1.78
SLX8	YER116C	MATALPHA1	P0CY06	175 aa		3.92	□□□□□ -1.78
SLX8	YER116C	HMLALPHA1	P0CY07	175 aa		3.92	□□□□□ -1.78
SLX8	YER116C	COQ1	P18900	473 aa		3.92	□□□□□ -1.78
SLX8	YER116C	SPE2	P21182	396 aa		3.92	□□□□□ -1.78
SLX8	YER116C	YSR3	P23501	404 aa		3.92	□□□□□ -1.78
SLX8	YER116C	YSP3	P25036	478 aa		3.92	□□□□□ -1.78
SLX8	YER116C	ELO2	P25358	347 aa		3.92	□□□□□ -1.78
SLX8	YER116C	PUP3	P25451	205 aa	Known RBP	3.92	□□□□□ -1.78
SLX8	YER116C	PRR1	P28708	518 aa		3.92	□□□□□ -1.78
SLX8	YER116C	PSO2	P30620	661 aa		3.92	□□□□□ -1.78
SLX8	YER116C	ZIP1	P31111	875 aa		3.92	□□□□□ -1.78
SLX8	YER116C	STE14	P32584	239 aa		3.92	□□□□□ -1.78
SLX8	YER116C	FRE1	P32791	686 aa		3.92	□□□□□ -1.78
SLX8	YER116C	KAP104	P38217	918 aa	Known RBP	3.92	□□□□□ -1.78
SLX8	YER116C	IML3	P38265	245 aa		3.92	□□□□□ -1.78
SLX8	YER116C	PCA1	P38360	1216 aa		3.92	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms