RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W TFB4Q12004 338 aa7.53□□□□□ -1.2
SHC1YER096W YLR111WQ12528 110 aa7.53□□□□□ -1.2
SHC1YER096W IDH2P28241 369 aaKnown RBP7.52□□□□□ -1.2
SHC1YER096W ATP7P30902 174 aa7.52□□□□□ -1.2
SHC1YER096W TFB1P32776 642 aa7.52□□□□□ -1.2
SHC1YER096W KKQ8P36004 724 aa7.52□□□□□ -1.2
SHC1YER096W COS111P38308 924 aa7.52□□□□□ -1.2
SHC1YER096W GIC1P38785 314 aa7.52□□□□□ -1.2
SHC1YER096W FMO1P38866 432 aa7.52□□□□□ -1.2
SHC1YER096W RGA1P39083 1007 aa7.52□□□□□ -1.2
SHC1YER096W ERV46P39727 415 aa7.52□□□□□ -1.2
SHC1YER096W SSU1P41930 458 aa7.52□□□□□ -1.2
SHC1YER096W ZIM17P42844 174 aa7.52□□□□□ -1.2
SHC1YER096W MET12P46151 657 aa7.52□□□□□ -1.2
SHC1YER096W FMP33P46998 180 aa7.52□□□□□ -1.2
SHC1YER096W HXT16P47185 567 aa7.52□□□□□ -1.2
SHC1YER096W UPF3P48412 387 aaKnown RBP7.52□□□□□ -1.2
SHC1YER096W GPI1P53306 609 aa7.52□□□□□ -1.2
SHC1YER096W HXT15P54854 567 aa7.52□□□□□ -1.2
SHC1YER096W HMO1Q03973 246 aaKnown RBP7.52□□□□□ -1.2
SHC1YER096W TY4A-HQ6Q5P6 413 aa7.52□□□□□ -1.2
SHC1YER096W FMP27Q06179 2628 aa7.52□□□□□ -1.21
SHC1YER096W PRT1P06103 763 aaKnown RBP7.52□□□□□ -1.21
SHC1YER096W MSS18P08593 268 aa7.52□□□□□ -1.21
SHC1YER096W DAP2P18962 818 aa7.52□□□□□ -1.21
SHC1YER096W RDS2P19541 446 aaKnown RBP7.52□□□□□ -1.21
SHC1YER096W PPH21P23594 369 aa7.52□□□□□ -1.21
SHC1YER096W RVS161P25343 265 aaKnown RBP7.52□□□□□ -1.21
SHC1YER096W SLM5P25345 492 aaKnown RBP7.52□□□□□ -1.21
SHC1YER096W SKG1P36169 355 aa7.52□□□□□ -1.21
SHC1YER096W AXL2P38928 823 aa7.52□□□□□ -1.21
SHC1YER096W DSS1P39112 969 aa7.52□□□□□ -1.21
SHC1YER096W MTW1P39731 289 aa7.52□□□□□ -1.21
SHC1YER096W GAB1P41733 394 aa7.52□□□□□ -1.21
SHC1YER096W SEC26P41810 973 aaKnown RBP7.52□□□□□ -1.21
SHC1YER096W GUS1P46655 708 aaKnown RBP RIP-Chip data7.52□□□□□ -1.21not detected
SHC1YER096W CIS3P47001 227 aa7.52□□□□□ -1.21
SHC1YER096W ART5P53244 586 aaKnown RBP7.52□□□□□ -1.21
SHC1YER096W ASI2P53895 289 aa7.52□□□□□ -1.21
SHC1YER096W YNL140CP53910 189 aa7.52□□□□□ -1.21
SHC1YER096W RPN6Q12377 434 aa7.52□□□□□ -1.21
SHC1YER096W THP2O13539 261 aaKnown RBP7.51□□□□□ -1.21
SHC1YER096W ALG7P07286 448 aa7.51□□□□□ -1.21
SHC1YER096W UNG1P12887 359 aa7.51□□□□□ -1.21
SHC1YER096W TOP3P13099 656 aa7.51□□□□□ -1.21
SHC1YER096W SYP1P25623 870 aaKnown RBP7.51□□□□□ -1.21
SHC1YER096W UGP1P32861 499 aaKnown RBP7.51□□□□□ -1.21
SHC1YER096W SPO23P33757 523 aa7.51□□□□□ -1.21
SHC1YER096W YHR218WP38899 603 aa7.51□□□□□ -1.21
SHC1YER096W MET30P39014 640 aa7.51□□□□□ -1.21
SHC1YER096W FHN1P53279 174 aa7.51□□□□□ -1.21
SHC1YER096W MMT1Q03218 510 aa7.51□□□□□ -1.21
SHC1YER096W GMC2Q06201 188 aa7.51□□□□□ -1.21
SHC1YER096W YFT2Q06676 274 aa7.51□□□□□ -1.21
SHC1YER096W GYP1Q08484 637 aa7.51□□□□□ -1.21
SHC1YER096W YPR022CQ12139 1133 aa7.51□□□□□ -1.21
SHC1YER096W BMT6Q12291 365 aa7.51□□□□□ -1.21
SHC1YER096W TY2A-LR1P0C2J4 438 aa7.5□□□□□ -1.21
SHC1YER096W TY2A-FP0CX61 438 aa7.5□□□□□ -1.21
SHC1YER096W TY2A-GR2P0CX62 438 aa7.5□□□□□ -1.21
SHC1YER096W RNQ1P25367 405 aa7.5□□□□□ -1.21
SHC1YER096W TY2A-CP25383 438 aa7.5□□□□□ -1.21
SHC1YER096W PET309P32522 965 aaPredicted RBP7.5□□□□□ -1.21
SHC1YER096W RRN10P38204 145 aa7.5□□□□□ -1.21
SHC1YER096W TRM7P38238 310 aaKnown RBP7.5□□□□□ -1.21
SHC1YER096W LAS21P40367 830 aa7.5□□□□□ -1.21
SHC1YER096W KEL2P50090 882 aa7.5□□□□□ -1.21
SHC1YER096W MRK1P50873 501 aa7.5□□□□□ -1.21
SHC1YER096W SWS2P53937 143 aa7.5□□□□□ -1.21
SHC1YER096W IRC15Q02733 499 aa7.5□□□□□ -1.21
SHC1YER096W SKI8Q02793 397 aaPredicted RBP7.5□□□□□ -1.21
SHC1YER096W TY2A-DR2Q03483 438 aa7.5□□□□□ -1.21
SHC1YER096W TRM82Q03774 444 aa7.5□□□□□ -1.21
SHC1YER096W NMD4Q12129 218 aa7.5□□□□□ -1.21
SHC1YER096W YOR114WQ12219 294 aa7.5□□□□□ -1.21
SHC1YER096W YLL054CQ12244 843 aa7.5□□□□□ -1.21
SHC1YER096W RPN5Q12250 445 aaKnown RBP7.5□□□□□ -1.21
SHC1YER096W TY2A-BQ12260 438 aa7.5□□□□□ -1.21
SHC1YER096W TY2A-OR2Q12293 438 aa7.5□□□□□ -1.21
SHC1YER096W TY2A-DR1Q12392 438 aa7.5□□□□□ -1.21
SHC1YER096W TY2A-OR1Q12439 438 aa7.5□□□□□ -1.21
SHC1YER096W TY2A-DR3Q99303 438 aa7.5□□□□□ -1.21
SHC1YER096W YPR096CO13587 100 aa7.49□□□□□ -1.21
SHC1YER096W COX3P00420 269 aa7.49□□□□□ -1.21
SHC1YER096W RED1P14291 827 aa7.49□□□□□ -1.21
SHC1YER096W TYR1P20049 452 aa7.49□□□□□ -1.21
SHC1YER096W ERG6P25087 383 aaKnown RBP7.49□□□□□ -1.21
SHC1YER096W FAA2P39518 744 aa7.49□□□□□ -1.21
SHC1YER096W APQ12P40532 138 aa7.49□□□□□ -1.21
SHC1YER096W ARF3P40994 183 aaRIP-Chip data7.49□□□□□ -1.21not detected
SHC1YER096W MSC1Q03104 513 aa7.49□□□□□ -1.21
SHC1YER096W ROY1Q04847 553 aa7.49□□□□□ -1.21
SHC1YER096W YML053CQ04978 212 aa7.49□□□□□ -1.21
SHC1YER096W REH1Q06709 432 aa7.49□□□□□ -1.21
SHC1YER096W ULA1Q12059 462 aa7.49□□□□□ -1.21
SHC1YER096W RUP1Q12242 671 aa7.49□□□□□ -1.21
SHC1YER096W CBP2P03874 630 aaPredicted RBP7.48□□□□□ -1.21
SHC1YER096W ATP4P05626 244 aa7.48□□□□□ -1.21
SHC1YER096W BCY1P07278 416 aaKnown RBP7.48□□□□□ -1.21
SHC1YER096W AGP1P25376 633 aa7.48□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms