RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C AMD1P15274 810 aaKnown RBP3.09□□□□□ -1.91
VAB2YEL005C ATP10P18496 279 aa3.09□□□□□ -1.91
VAB2YEL005C RPI1P23250 407 aaKnown RBP3.09□□□□□ -1.91
VAB2YEL005C YCR051WP25631 222 aa3.09□□□□□ -1.91
VAB2YEL005C BUB3P26449 341 aa3.09□□□□□ -1.91
VAB2YEL005C MMS4P38257 691 aa3.09□□□□□ -1.91
VAB2YEL005C MTC4P38335 694 aaKnown RBP3.09□□□□□ -1.91
VAB2YEL005C ISC1P40015 477 aaKnown RBP3.09□□□□□ -1.91
VAB2YEL005C GWT1P47026 490 aa3.09□□□□□ -1.91
VAB2YEL005C KAP120Q02932 1032 aa3.09□□□□□ -1.91
VAB2YEL005C RMT2Q03305 412 aa3.09□□□□□ -1.91
VAB2YEL005C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.09□□□□□ -1.91not detected
VAB2YEL005C SIL1Q08199 421 aa3.09□□□□□ -1.91
VAB2YEL005C NDD1Q08887 554 aa3.09□□□□□ -1.91
VAB2YEL005C YLR278CQ05854 1341 aa3.09□□□□□ -1.91
VAB2YEL005C ATR1P13090 542 aa3.08□□□□□ -1.92
VAB2YEL005C PDX1P16451 410 aa3.08□□□□□ -1.92
VAB2YEL005C YIM1P28625 365 aa3.08□□□□□ -1.92
VAB2YEL005C SPC110P32380 944 aa3.08□□□□□ -1.92
VAB2YEL005C APE2P32454 952 aaKnown RBP3.08□□□□□ -1.92
VAB2YEL005C YME2P32843 850 aa3.08□□□□□ -1.92
VAB2YEL005C NIP100P33420 868 aa3.08□□□□□ -1.92
VAB2YEL005C STB6P36085 766 aa3.08□□□□□ -1.92
VAB2YEL005C APE3P37302 537 aaKnown RBP3.08□□□□□ -1.92
VAB2YEL005C THI2P38141 450 aa3.08□□□□□ -1.92
VAB2YEL005C RPH1P39956 796 aa3.08□□□□□ -1.92
VAB2YEL005C LSM5P40089 93 aaKnown RBP3.08□□□□□ -1.92
VAB2YEL005C YJL213WP40896 331 aa3.08□□□□□ -1.92
VAB2YEL005C YFR016CP43597 1233 aaKnown RBP3.08□□□□□ -1.92
VAB2YEL005C PNG1Q02890 363 aa3.08□□□□□ -1.92
VAB2YEL005C TAP42Q04372 366 aa3.08□□□□□ -1.92
VAB2YEL005C HSP31Q04432 237 aa3.08□□□□□ -1.92
VAB2YEL005C MUM3Q08750 479 aa3.08□□□□□ -1.92
VAB2YEL005C RPL15AP05748 204 aaKnown RBP3.07□□□□□ -1.92
VAB2YEL005C MRS3P10566 314 aa3.07□□□□□ -1.92
VAB2YEL005C RPC53P25441 422 aa3.07□□□□□ -1.92
VAB2YEL005C NDI1P32340 513 aa3.07□□□□□ -1.92
VAB2YEL005C PMU1P36069 295 aa3.07□□□□□ -1.92
VAB2YEL005C SRP72P38688 640 aaKnown RBP3.07□□□□□ -1.92
VAB2YEL005C YHR054CP38780 354 aa3.07□□□□□ -1.92
VAB2YEL005C RPM2Q02773 1202 aa3.07□□□□□ -1.92
VAB2YEL005C YDR387CQ04162 555 aa3.07□□□□□ -1.92
VAB2YEL005C ROY1Q04847 553 aa3.07□□□□□ -1.92
VAB2YEL005C ERP1Q05359 219 aaKnown RBP3.07□□□□□ -1.92
VAB2YEL005C DON1Q05610 365 aa3.07□□□□□ -1.92
VAB2YEL005C REX4Q08237 289 aa3.07□□□□□ -1.92
VAB2YEL005C KEL3Q08979 651 aaPredicted RBP3.07□□□□□ -1.92
VAB2YEL005C RKM5Q12367 367 aa3.07□□□□□ -1.92
VAB2YEL005C HIS4P00815 799 aaKnown RBP3.06□□□□□ -1.92
VAB2YEL005C GDH1P07262 454 aaKnown RBP3.06□□□□□ -1.92
VAB2YEL005C RML2P32611 393 aa3.06□□□□□ -1.92
VAB2YEL005C DHH1P39517 506 aaKnown RBP3.06□□□□□ -1.92
VAB2YEL005C TFG2P41896 400 aaPredicted RBP3.06□□□□□ -1.92
VAB2YEL005C YFL067WP43537 175 aa3.06□□□□□ -1.92
VAB2YEL005C RPS0BP46654 252 aaKnown RBP3.06□□□□□ -1.92
VAB2YEL005C ECM27P47144 725 aa3.06□□□□□ -1.92
VAB2YEL005C COS5P47187 383 aa3.06□□□□□ -1.92
VAB2YEL005C SSN8P47821 323 aa3.06□□□□□ -1.92
VAB2YEL005C PCP1P53259 346 aa3.06□□□□□ -1.92
VAB2YEL005C CAF40P53829 373 aa3.06□□□□□ -1.92
VAB2YEL005C YIF1P53845 314 aaKnown RBP3.06□□□□□ -1.92
VAB2YEL005C PIR3Q03180 325 aa3.06□□□□□ -1.92
VAB2YEL005C ARX1Q03862 593 aaKnown RBP3.06□□□□□ -1.92
VAB2YEL005C ERB1Q04660 807 aaKnown RBP3.06□□□□□ -1.92
VAB2YEL005C HCR1Q05775 265 aaKnown RBP3.06□□□□□ -1.92
VAB2YEL005C COS7Q07788 383 aa3.06□□□□□ -1.92
VAB2YEL005C AYT1Q12226 474 aa3.06□□□□□ -1.92
VAB2YEL005C LPD1P09624 499 aaKnown RBP3.05□□□□□ -1.92
VAB2YEL005C CPR1P14832 162 aaKnown RBP3.05□□□□□ -1.92
VAB2YEL005C CLB1P24868 471 aa3.05□□□□□ -1.92
VAB2YEL005C PUT3P25502 979 aaPredicted RBP3.05□□□□□ -1.92
VAB2YEL005C YCR100CP25606 316 aa3.05□□□□□ -1.92
VAB2YEL005C ADK2P26364 225 aa3.05□□□□□ -1.92
VAB2YEL005C BEM1P29366 551 aa3.05□□□□□ -1.92
VAB2YEL005C PRP21P32524 280 aaPredicted RBP3.05□□□□□ -1.92
VAB2YEL005C YCR041WP37265 110 aa3.05□□□□□ -1.92
VAB2YEL005C RPR2P40571 144 aa3.05□□□□□ -1.92
VAB2YEL005C YJL132WP47014 750 aa3.05□□□□□ -1.92
VAB2YEL005C POP6P53218 158 aa3.05□□□□□ -1.92
VAB2YEL005C ART5P53244 586 aaKnown RBP3.05□□□□□ -1.92
VAB2YEL005C SKO1Q02100 647 aa3.05□□□□□ -1.92
VAB2YEL005C HOT1Q03213 719 aa3.05□□□□□ -1.92
VAB2YEL005C SXM1Q04175 944 aaKnown RBP3.05□□□□□ -1.92
VAB2YEL005C YPL199CQ08954 240 aa3.05□□□□□ -1.92
VAB2YEL005C VPS54Q12071 889 aa3.05□□□□□ -1.92
VAB2YEL005C MED2Q12124 431 aa3.05□□□□□ -1.92
VAB2YEL005C VAM3Q12241 283 aa3.05□□□□□ -1.92
VAB2YEL005C SMC6Q12749 1114 aa3.05□□□□□ -1.92
VAB2YEL005C RIP1P08067 215 aa3.04□□□□□ -1.92
VAB2YEL005C URA4P20051 364 aa3.04□□□□□ -1.92
VAB2YEL005C MCK1P21965 375 aaKnown RBP3.04□□□□□ -1.92
VAB2YEL005C BRF1P29056 596 aa3.04□□□□□ -1.92
VAB2YEL005C KEL1P38853 1164 aaKnown RBP3.04□□□□□ -1.92
VAB2YEL005C HAT2P39984 401 aa3.04□□□□□ -1.92
VAB2YEL005C CAK1P43568 368 aaPredicted RBP3.04□□□□□ -1.92
VAB2YEL005C YIP1P53039 248 aa3.04□□□□□ -1.92
VAB2YEL005C BNI5P53890 448 aaKnown RBP3.04□□□□□ -1.92
VAB2YEL005C MRP51Q02950 344 aa3.04□□□□□ -1.92
VAB2YEL005C ODC1Q03028 310 aa3.04□□□□□ -1.92
VAB2YEL005C YMR130WQ04223 302 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms